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   SELECTED PUBLICATIONS

   Books

Kochetkov, N.K. & Knirel, Y.A. (1989) The structures of O-specific polysaccharides of bacterium Pseudomonas aeruginosa. Routledge, 1989 (Soviet Scientific Reviews Series, Section B, 13, Part I).

Kochetkov, N.K., Shashkov, A.S., Lipkind, G.M. & Knirel, Y.A. New 13C-NMR approaches to the structural analysis of carbohydrates. Routledge, 1989 (Soviet Scientific Reviews Series, Section B, 13, Part II).

Varbanets, L.D., Zdorovenko, G.M. & Knirel, Y.A. Methods of endotoxin investigations (Podgorskii, V.S., ed.). Kiev: Naukova Dumka, 2006 [in Russian]. [Abstract]

Bacterial lipopolysaccharides: structure, chemical synthesis, biogenesis and interaction with host cells (Knirel, Y.A. & Valvano, M.A., eds.). Wien: Springer, 2011. Read Online [Front matter]

   Book Chapters

Knirel, Y.A. (1985) Lipopolysaccharides of Gram-negative bacteria. In Progress in carbohydrate chemistry (Torgov, I.V., ed.). Moscow: Nauka, pp. 54-76 [in Russian].Cited by other papers 4 times.

Zähringer, U., Knirel, Y.A., Lindner, B., Helbig, J.H., Sonesson, A., Marre, R. & Rietschel, E.T. (1995) The lipopolysaccharide of Legionella pneumophila serogroup 1 (strain Philadelphia 1): chemical structure and biological significance. In Bacterial endotoxins: lipopolysaccharides from genes to therapy (Levin, J., Alving, C.R., Munford, R.S. & Redl, H., eds.). NY: Wiley-Liss, pp. 113-139 (Prog. Clin. Biol. Res., 392). [PDF] Cited by other papers 71 times.

Knirel, Y.A. & Zdorovenko, G.M. (1997) Structures of O-polysaccharide chains of lipopolysaccharides as the basis for classification of Pseudomonas syringae and related strains. In Pseudomonas syringae pathovars and related pathogens (Rudolph, K., Burr, T. J., Mansfield, J. W., Stead, D., Vivian, A. & von Kietzell, J., eds.). Dordrecht: Kluwer Academic Publishers, pp. 475-480.Cited by other papers 5 times.

Jansson, P.-E., Albert, M.J., Knirel, Y.A., Moran, A.P., Kocharova, N.A., Senchenkova, S.N., Weintraub, A. & Widmalm, G. (2001) Bacterial polysaccharides - biologically active surface polymers. In Medicinal chemistry into the millennium (Campbell, M.M. & Blagbrough, I.S., eds.). Cambridge: Royal Society of Chemistry, pp. 266-283. [PDF]

Kooistra, O., Knirel, Y.A., Lüneberg, E., Frosch, M. & Zähringer, U. (2002) Phase variation in Legionella pneumophila serogroup 1, subgroup OLDA, strain RC1 influences lipid A structure In: Legionella (Marre, R., Abu Kwaik, Y., Bartlett, C., Cianciotto, N., Fields, B.S., Frosch, M., Hacker, J. & Lück, P.C., eds.) Washington, D.C.: American Society for Microbiology, pp. 68-73. [PDF] Cited by other papers 5 times.

Gremyakova, T.A., Vinogradov, E.V., Lindner, B., Kocharova, N.A., Senchenkova, S.N., Shashkov, A.S., Knirel, Y.A., Holst, O., Shaikhutdinova, R.Z. & Anisimov, A.P. (2003) The core structure of the lipopolysaccharide of Yersinia pestis strain KM218. Influence of growth temperature. In: The genus Yersinia: entering the functional genomic era (Skurnik, M., Bengoechea, J.A. & Granfors, K., eds.) NY: Kluwer Academic/Plenum Publishers, pp. 229-232 (Adv. Exp. Med. Biol., 529). [PDF] Cited by other papers 2 times.

Knirel, Y.A., Dentovskaya, S.V., Bystrova, O.V., Kocharova, N.A., Senchenkova, S.N., Shaikhutdinova, R.Z., Titareva, G.M. Bakhteeva, I.V., Lindner, B., Pier, G.B. & Anisimov, A.P. (2007) Relationship of the lipopolysaccharide structure of Yersinia pestis to resistance to antimicrobial factors. In The genus Yersinia: from genomics to function (Perry, R.D. & Fetherston, J.D., eds.) Elsevier, pp. 88-96 (Adv. Exp. Med. Biol., 603). [PDF] Cited by other papers 8 times.

Knirel, Y.A. (2009) O-Specific polysaccharides of Gram-negative bacteria. In Microbial glycobiology: structures, relevance and applications (Moran, A., Brennan, P., Holst, O. & Von Itzstein, M., eds.) Elsevier, pp. 57-73. [PDF] Cited by other papers 2 times.

Knirel, Y.A. (2009) Structures of bacterial polysaccharides. In Progress in the synthesis of complex carbohydrate chains of plant and microbial polysaccharides (Nifantiev, N.E., ed.) Kerala, India: Transworld Research Network, pp. 181-198. [PDF]Cited by other papers 1 time.

Knirel, Y.A. (2011) Structure of O-antigens. In Bacterial lipopolysaccharides: structure, chemical synthesis, biogenesis and interaction with host cells (Knirel, Y.A. & Valvano, M.A., eds.) Wien: Springer, pp. 41-115. [PDF]Cited by other papers 15 times.

Knirel, Y.A. & Valvano, M.A. (2013) Bacterial polysaccharide structure and biosynthesis. In Encyclopedia of biophysics (Roberts, G.C.K., ed.) Heidelberg-New York-Dordrecht-London: Springer, pp. 162-168.

   Review Articles

Knirel, Y.A. & Kochetkov, N.K. (1987) 2,3-Diamino-2,3-dideoxyuronic and 5,7-diamino-3,5,7,9-tetradeoxynonulosonic acids: new components of bacterial polysaccharides. FEMS Microbiol. Rev., 46, 381-384. [PDF] Cited by other papers 14 times.

Knirel, Y.A., Vinogradov, E.V., Kocharova, N.A., Paramonov, N.A., Kochetkov, N.K., Dmitriev, B.A., Stanoslavsky, E.S. & Lanyi, B. (1988) The structure of O-specific polysaccharides and serological classification of Pseudomonas aeruginosa. Acta Microbiol. Hung., 35, 3-24. [PDF] Cited by other papers 72 times.

Knirel, Y.A., Vinogradov, E.V. & Mort, A.J. (1989) Application of anhydrous hydrogen fluoride for the structural analysis of polysaccharides. Adv. Carbohydr. Chem. Biochem., 47, 167-202. [PDF] Cited by other papers 36 times.

Soldatkina, M.A., Knirel, Y.A., Tanatar, N.V. & Zakharova, I.Y. (1989) Immunological and structural studies of Pseudomonas cepacia lipopolysaccharide. Zh. Mikrobiol., 51, 32-38 [in Russian]. Cited by other papers 17 times.

Stanislavsky, E.S., Kholodkova, E.V., Knirel, Y.A. & Kocharova, N.A. (1989) Saccharides of seven Pseudomonas aeruginosa immunotypes. FEMS Microbiol.Immunol., 47, 245-251. [PDF] Cited by other papers 2 times.

Knirel, Y.A. (1990) Polysaccharide antigens of Pseudomonas aeruginosa. CRC Crit. Rev. Microbiol., 17, 273-304. [PDF] Cited by other papers 110 times.

Knirel, Y.A. & Kochetkov, N.K. The structure of lipopolysaccharides of Gram-negative bacteria.
(1993) I. General characterization of the lipopolysaccharides and the structure of lipid A. Biokhimiya, 58, 166-181 [in Russian; English translation: Biochemistry (Moscow), 58, 73-84]. [PDF] Cited by other papers 18 times;
(1993) II. The structure of the core region. Biokhimiya, 58, 182-201 [in Russian; English translation: Biochemistry (Moscow), 58, 84-99]. [PDF] Cited by other papers 17 times;
(1994) III. The structure of O-antigens. Biokhimiya, 59, 1784-1851 [in Russian; English translation: Biochemistry (Moscow), 59, 1325-1383]. [PDF] Cited by other papers 150 times.

Knirel, Y.A. & Kocharova, N.A. (1995) Structure and properties of the common polysaccharide antigen of Pseudomonas aeruginosa. Biochemistry (Moscow), 60, 1499-1507. [PDF]

Knirel, Y. A., Kocharova, N. A., Bystrova, O. V., Katzenellenbogen, E. & Gamian, A. (2002) Structures and serology of the O-specific polysaccharides of bacteria of the genus Citrobacter. Arch. Immunol. Ther. Exp., 50, 379-391. [PDF] Cited by other papers 8 times.

Vinogradov, E., Sidorczyk, Z. & Knirel, Y. A. (2002) Structure of the lipopolysaccharide core region of the bacteria of the genus Proteus. Aust. J. Chem., 55, 61-67. [PDF] Cited by other papers 15 times.

Knirel, Y. A. & Perepelov, A. V. (2002) Trifluoromethanesulfonic acid: a useful reagent for the solvolytic cleavage of glycosidic linkages in structural analysis of bacterial polysaccharides. Aust. J. Chem., 55, 69-72. [PDF] Cited by other papers 3 times.

Knirel, Y.A., Shashkov, A.S., Tsvetkov, Y.E., Jansson, P.-E. & Zähringer, U. (2003) 5,7-Diamino-3,5,7,9-tetradeoxynon-2-ulosonic acids in bacterial glycopolymers: chemistry and biochemistry. Adv. Carbohydr. Chem. Biochem., 58, 371-417. [PDF] Cited by other papers 32 times.

Knirel, Y.A., Dentovskaya, S.V., Senchenkova, S.N., Shaikhutdinova, R.Z., Kocharova, N.A. & Anisimov, A.P. (2006) Structural features and structural variability of the lipopolysaccharide of Yersinia pestis, the cause of plague. J. Endotoxin Res., 12, 3-9. [PDF] Cited by other papers 19 times.

Knirel, Y.A., Bystrova, O.V., Kocharova, N.A., Zähringer, U. & Pier, G.B. (2006) Conserved and variable structural features in the lipopolysaccharide of Pseudomonas aeruginosa. J. Endotoxin Res., 12, 324-336. [PDF] Corrigendum in: Innate Immun., 16, 274 (2010). [PDF] Cited by other papers 49 times.

Liu, B., Knirel, Y.A., Feng, L., Perepelov, A.V., Senchenkova, S.N., Wang, Q., Reeves, P.R. & Wang, L. (2008) Structure and genetics of Shigella O antigens. FEMS Microbiol. Rev., 32, 627-653. [PDF] Corrigendum in: FEMS Microbiol. Rev., 34, 606 (2010). [PDF] Cited by other papers 69 times.

Knirel, Y.A., Perepelov, A.V., Kondakova, A.N., Senchenkova, S.N., Sidorczyk, Z., Rozalski, A. & Kaca, W. (2011) Structure and serology of O-antigens as the basis for classification of Proteus strains. Innate Immun., 17, 70-96. [PDF] Cited by other papers 6 times.

Knirel', Y.A., Anisimov, A.P. & Fedorova, V.A. (2011) Struggling for control over the plague. The past and present of the Black Death. Herald Russ. Acad. Sci., 81, 35-43. [PDF] Cited by other papers 1 time.

Knirel, Y.A., Perepelov, A.V. & Shevelev, S.D. (2011) Higher aldulosonic acids: components of bacterial glycans. Mendeleev Commun., 21, 173-182. [PDF] Cited by other papers 6 times.

Knirel, Y.A. & Anisimov, A.P. (2012) Lipopolysaccharide of Yersinia pestis, the cause of plague: structure, genetics, biological properties. Acta Naturae, 4, 16-28. [PDF] Cited by other papers 13 times.

Ovchinnikova, O.G., Rozalski, A., Liu, B. & Knirel, Y.A. (2013) O-Antigens of bacteria of the genus Providencia: structure, serology, genetics, and biosynthesis. Biochemistry (Moscow), 78, 798-817. [PDF] Cited by other papers 4 times.

Liu, B., Knirel, Y.A., Feng, L., Perepelov, A.V., Senchenkova, S.N., Reeves, P. & Wang, L. (2014) Structural diversity in Salmonella O antigens and its genetic basis. FEMS Microbiol. Rev., 38, 56-89. Cited by other papers 9 times.

Knirel, Y.A., Sun, Q., Senchenkova, S.N., Perepelov, A.V. & Xu, J. (2015) O-Antigen modifications providing the antigenic diversity of Shigella flexneri and underlying genetic mechanisms. Biochemistry (Moscow), 80, 901-915. Cited by other papers 1 time.

   Research Articles

Dmitriev, B.A., Knirel, Y.A. & Kochetkov, N.K. (1973) Selective cleavage of glycosidic linkages. Studies with the model compound benzyl 2-acetamido-2-deoxy-3-O-β-D-galactopyranosyl-α-D-glucopyranoside. Carbohydr. Res., 29, 451-457. [PDF] Cited by other papers 26 times.

Dmitriev, B.A., Knirel, Y.A., Kochetkov, N.K. & Hofman, I. L. (1976) Somatic antigens of Shigella. Structural investigation on the O-specific polysaccharide chain of Shigella dysenteriae type 1 lipopolysaccharide. Eur. J. Biochem., 66, 559-566. [PDF] Cited by other papers 39 times.

Dmitriev, B.A., Knirel, Y.A., Sheremet, O.K., Shashkov, A.S., Kochetkov, N.K. & Hofman, I.L. (1979) Somatic antigens of Shigella. The structure of the specific polysaccharide of Shigella newcastle (Sh. flexneri type 6) lipopolysaccharide. Eur. J. Biochem., 98, 309-316. [PDF] Cited by other papers 11 times.

Dmitriev, B.A., Knirel, Y.A., Kocharova, N.A., Kochetkov, N.K., Stanislavsky, E.S. & Mashilova, G.M. (1980) Somatic antigens of Pseudomonas aeruginosa. The structure of the polysaccharide chain of Ps. aeruginosa O-serogroup 7 (Lanyi) lipopolysaccharide. Eur. J. Biochem., 106, 643-651. [PDF] Cited by other papers 33 times.

Knirel, Y.A., Vinogradov, E.V., Dmitriev, B.A. & Kochetkov, N.K. (1981) Location of O-acetyl groups in bacterial polysaccharides. Bioorg. Khim., 7, 463-465 [in Russian]. Cited by other papers 2 times.

Shashkov, A.S., Usov, A.I., Knirel, Y.A., Dmitriev, B.A. & Kochetkov, N.K. (1981) Determination of the absolute and anomeric configurations of sugar residues in oligo- and polysaccharides using glycosylation shifts in 13C NMR spectra. Bioorg. Khim., 7, 1364-1371 [in Russian]. Cited by other papers 9 times.

Knirel, Y.A., Kocharova, N.A., Shashkov, A.S., Dmitriev, B.A. & Kochetkov, N.K. (1981) 2,3-Diacetamido-2,3-dideoxy-D-glucuronic acid: a new acidic amino sugar from Pseudomonas aeruginosa type O6 lipopolysaccharide. Carbohydr. Res., 93, C12-C13. [PDF] Cited by other papers 12 times.

Knirel, Y.A., Vinogradov, E.V., Kocharova, N.A., Shashkov, A.S., Dmitriev, B.A. & Kochetkov, N.K. (1983) Synthesis and 13C-n.m.r. spectra of methyl 2,3-diacetamido-2,3-dideoxy-α-D-hexopyranosides and 2,3-diacetamido-2,3-dideoxy-D-hexoses. Carbohydr. Res., 122, 181-188. [PDF] Cited by other papers 7 times.

Knirel, Y.A., Vinogradov, E.V., L'vov, V.L., Kocharova, N.A., Shashkov, A.S., Dmitriev, B.A. & Kochetkov, N.K. (1984) Sialic acids of a new type from the lipopolysaccharides of Pseudomonas aeruginosa and Shigella boydii. Carbohydr. Res., 133, C5-C8. [PDF] Cited by other papers 22 times.

Knirel, Y.A., Vinogradov, E.V., Shashkov, A.S., Kochetkov, N.K., L'vov, V.L. & Dmitriev, B.A. (1985) Identification of 5-acetamido-3,5,7,9-tetradeoxy-7-[(R)-3-hydroxybutyramido]-L-glycero-L-manno-nonulosonic acid as a component of bacterial polysaccharides. Carbohydr. Res., 141, C1-C3. [PDF] Cited by other papers 9 times.

Knirel, Y.A., Vinogradov, E.V., Shashkov, A.S., Dmitriev, B.A., Kochetkov, N.K., Stanislavsky, E.S. & Mashilova, G.M. (1986) Somatic antigens of Pseudomonas aeruginosa. The structure of O-specific polysaccharide chains of P. aeruginosa O10 (Lanyi) lipopolysaccharides. Eur. J. Biochem., 157, 129-138. [PDF] Cited by other papers 22 times.

Knirel, Y.A., Vinogradov, E.V., Shashkov, A.S., Dmitriev, B.A., Kochetkov, N.K., Stanislavsky, E.S. & Mashilova, G.M. (1987) Somatic antigens of Pseudomonas aeruginosa. The structure of the O-specific polysaccharide chain of the lipopolysaccharide from P. aeruginosa O13 (Lanyi). Eur. J. Biochem., 163, 627-637. [PDF] Cited by other papers 24 times.

Knirel, Y.A., Kocharova, N.A., Shashkov, A.S., Dmitriev, B.A., Kochetkov, N.K., Stanislavsky, E.S. & Mashilova, G.M. (1987) Somatic antigens of Pseudomonas aeruginosa. The structure of the O-specific polysaccharide chains of the lipopolysaccharide from P. aeruginosa O5 (Lanyi) and immunotype 6 (Fisher). Eur. J. Biochem., 163, 639-652. [PDF] Cited by other papers 38 times.

Knirel, Y.A., Paramonov, N.A., Vinogradov, E.V., Shashkov, A.S., Dmitriev, B.A., Kochetkov, N.K., Kholodkova, E. V. & Stanislavsky, E.S. (1987) Somatic antigens of Pseudomonas aeruginosa. The structure of the O-specific polysaccharide chains of the lipopolysaccharides of P. aeruginosa O3 (Lanyi), O25 (Wokatsch) and Fisher immunotypes 3 and 7. Eur. J. Biochem., 167, 549-567. [PDF] Cited by other papers 18 times.

Vinogradov, E.V., Knirel, Y.A., Shashkov, A.S. & Kochetkov, N.K. (1987) Determination of the degree of amidation of 2-deoxy-2-formamido-D-galacturonic acid in O-specific polysaccharides of Pseudomonas aeruginosa O4 and related strains. Carbohydr. Res., 170, C1-C4. [PDF] Cited by other papers 11 times.

Shashkov, A.S., Lipkind, G.M., Knirel, Y.A. & Kochetkov, N.K. (1988) Stereochemical factors determining the effects of glycosylation on the 13C chemical shifts in carbohydrates. Magn. Reson. Chem., 26, 735-747. [PDF] Cited by other papers 90 times.

Lipkind, G.M., Shashkov, A.S., Knirel, Y.A., Vinogradov, E.V. & Kochetkov, N.K. (1988) A computer-assisted structural analysis of regular polysaccharides on the basis of 13C-n.m.r. data. Carbohydr. Res., 175, 59-75. [PDF] Cited by other papers 156 times.

Kocharova, N.A., Knirel, Y.A., Kochetkov, N.K. & Stanislavsky, E.S. (1988) Characterization of a rhamnan derived from preparations of Pseudomonas aeruginosa lipopolysaccharides. Bioorg. Khim., 14, 701-703. Cited by other papers 15 times.

Knirel, Y.A., Dashunin, V.M., Shashkov, A.S., Kochetkov, N.K., Dmitriev, B.A. & Hofman, I.L. (1988) Somatic antigens of Shigella: Structure of the O-specific polysaccharide chain of the Shigella dysenteriae type 7 lipopolysaccharide. Carbohydr. Res., 179, 51-60. [PDF] Cited by other papers 34 times.

Kocharova, N.A., Knirel, Y.A., Shashkov, A.S., Kochetkov, N.K. & Pier, G.B. (1988) Structure of an extracellular cross-reactive polysaccharide from Pseudomonas aeruginosa immunotype 4. J. Biol. Chem., 263, 11291-11295. [PDF] Cited by other papers 15 times.

Kocharova, N.A., Hatano, K., Shashkov, A.S., Knirel, Y.A., Kochetkov, N.K. & Pier, G.B. (1989) The structure and serologic distribution of an extracellular neutral polysaccharide from Pseudomonas aeruginosa immunotype 3. J. Biol. Chem., 264, 15569-15573. [PDF] Cited by other papers 9 times.

Vinogradov, E.V., Krajewska-Pietrasik, D., Kaca, W., Shashkov, A.S., Knirel, Y.A. & Kochetkov, N.K. (1989) Structure of Proteus mirabilis O27 O-specific polysaccharide containing amino acids and phosphoethanolamine. Eur. J. Biochem., 185, 645-650. [PDF] Cited by other papers 14 times.

Knirel, Y.A., Kocharova, N.A., Shashkov, A.S., Kochetkov, N.K., Mamontova, V.A. & Solov'eva, T.F. (1989) Structure of the capsular polysaccharide of Klebsiella ozaenae serotype K4 containing 3-deoxy-D-glycero-D-galacto-nonulosonic acid. Carbohydr. Res., 188, 145-155. [PDF] Cited by other papers 34 times.

Nazarenko, E.L., Shashkov, A.S., Knirel, Y.A., Ivanova, E.P. & Ovodov, Y.S. (1990) Uncommon acidic monosaccharides as components of O-specific polysaccharides of Vibrio. Bioorg. Khim., 16, 1426-1429 [In Russian]. Cited by other papers 11 times.

Vinogradov, E.V., Shashkov, A.S., Knirel, Y.A., Kochetkov, N.K., Tochtamysheva, N.V., Averin, S.P., Goncharova, O.V. & Khlebnikov, V.S. (1991) Structure of the O-antigen of Francisella tularensis strain 15. Carbohydr. Res., 214, 289-297. [PDF] Cited by other papers 46 times.

Grimmecke, H.D., Mamat, U., Lauk, W., Shashkov, A.S., Knirel, Y.A., Vinogradov, E.V. & Kochetkov, N.K. (1991) Structure of the capsular polysaccharide and the O-side chain of the lipopolysaccharide from Acetobacter methanolicus MB 58/4 (IMET 10945), and of oligosaccharides resulting from their degradation by the bacteriophage Acm1. Carbohydr. Res., 220, 165-172. [PDF] Cited by other papers 8 times.

Rosner, H., Grimmecke, H.D., Knirel, Y.A. & Shashkov, A.S. (1992) Hyaluronic acid and a (1-->4)-β-xylan, extracellular polysaccharides of Pasteurella multocida (Carter type A) strain 880. Carbohydr. Res., 223, 329-333. [PDF] Cited by other papers 26 times.

Vinogradov, E.V., Shashkov, A.S., Knirel, Y.A., Kochetkov, N.K., Dabrowski, J., Grosskurth, H., Stanislavsky, E.S. & Kholodkova, E.V. (1992) The structure of the O-specific polysaccharide chain of the lipopolysaccharide of Salmonella arizonae O61. Carbohydr. Res., 231, 1-11. [PDF] Cited by other papers 15 times.

Knirel, Y.A., Paramonov, N.A., Shashkov, A.S., Kochetkov, N.K., Yarullin, R.G., Farber, S.M. & Efremenko, V.I. (1992) Structure of the polysaccharide chains of Pseudomonas pseudomallei lipopolysaccharides. Carbohydr. Res., 233, 185-193. [PDF] Cited by other papers 64 times.

Seltmann, G., Knirel, Y.A., Shashkov, A.S. & Tschape, H. (1992) Characterization of a lipopolysaccharide encoded by a recombinant Shigella sonnei plasmid in Escherichia coli K-12. Zentralbl. Bakteriol., 277, 419-428. [PDF] Cited by other papers 1 time.

Kocharova, N.A., Knirel, Y.A., Shashkov, A.S., Nifant'ev, N.E., Kochetkov, N.K., Varbanets, L.D., Moskalenko, N.V., Brovarskaya, O.S., Muras, V.A. & Young, J.M. (1993) Studies of O-specific polysaccharide chains of Pseudomonas solanacearum lipopolysaccharides consisting of structurally different repeating units. Carbohydr. Res., 250, 275-287. [PDF] Cited by other papers 14 times.

Knirel, Y.A., Rietschel, E.T., Marre, R. & Zähringer, U. (1994) The structure of the O-specific chain of Legionella pneumophila serogroup 1 lipopolysaccharide. Eur. J. Biochem., 221, 239-245. [PDF] Cited by other papers 51 times.

Vinogradov, E.V., Knirel, Y.A., Thomas-Oates, J.E., Shashkov, A.S. & L'vov, V.L. (1994) The structure of the cyclic enterobacterial common antigen (ECA) from Yersinia pestis. Carbohydr. Res., 258, 223-232. [PDF] Cited by other papers 21 times.

Knirel, Y.A., Paredes, L., Jansson, P.-E., Weintraub, A., Widmalm, G. & Albert, M.J. (1995) Structure of the capsular polysaccharide of Vibrio cholerae O139 synonym Bengal containing D-galactose-4,6-cyclophosphate. Eur. J. Biochem., 232, 391-396. [PDF] Cited by other papers 66 times.

Senchenkova, S.N., Shashkov, A.S., Moran, A.P., Helander, I. & Knirel, Y.A. (1995) Structures of the O-specific polysaccharide chains of Pectinatus cerevisiiphilus and Pectinatus frisingensis lipopolysaccharides. Eur. J. Biochem., 232, 552-557. [PDF] Cited by other papers 9 times.

Likhosherstov, L.M., Senchenkova, S.N., Knirel, Y.A., Shashkov, A.S., Shibaev, V.N., Stepnaya, O.A. & Kulaev, I.M. (1995) Structure of an acidic polysaccharide present in the bacteriolytic complex lysoamidase. FEBS Lett., 368, 113-116. [PDF] Cited by other papers 7 times.

Senchenkova, S.N., Knirel, Y.A., Likhosherstov, L.M., Shashkov, A.S., Shibaev, V.N., Starukhina L.A. & Deryabin V.V. (1995) Structure of simusan, a new acidic exopolysaccharide from Arthrobacter sp. Carbohydr. Res., 266, 103-113. [PDF] Cited by other papers 11 times.

Zubkov, V.A., Nazarenko, E.L., Gorshkova, R.P., Ivanova, E.P., Shashkov, A.S., Knirel, Y.A., Paramonov, N.A. & Ovodov, Y.S. (1995) Structure of the capsular polysaccharide from Alteromonas sp. CMM 155. Carbohydr. Res., 275, 147-154. [PDF] Cited by other papers 14 times.

Helbig, J.H., Lück, P.C., Knirel, Y.A. & Zähringer, U. (1995) Molecular characterization of a virulence-associated epitope on the lipopolysaccharide of Legionella pneumophila serogroup 1. Epidemiol. Infect., 115, 71-78. [PDF] Cited by other papers 26 times.

Senchenkova, S.N., Knirel, Y.A., Shashkov, A.S., McGovern, J.J. & Moran, A.P. (1996) The O-specific polysaccharide chain of Campylobacter fetus serotype B lipopolysaccharide is a linear D-rhamnan terminated with 3-O-methyl-D-rhamnose (D-acofriose). Eur. J. Biochem., 239, 434-438. [PDF] Cited by other papers 18 times.

Ovod, V., Rudolph, K., Knirel, Y.A. & Krohn, K. (1996) Immunochemical characterization of O polysaccharides composing the α-D-rhamnose backbone of lipopolysaccharide of Pseudomonas syringae and classification of bacteria into serogroups O1 and O2 with monoclonal antibodies. J. Bacteriol., 178, 6459-6465. [PDF] Cited by other papers 9 times.

Knirel, Y.A., Helbig, J.H. & Zähringer, U. (1996) Structure of a decasaccharide isolated by mild acid degradation and dephosphorylation of the lipopolysaccharide of Pseudomonas fluorescens strain ATCC 49271. Carbohydr. Res., 283, 129-139. [PDF] Cited by other papers 31 times.

Knirel, Y.A., Moll, H. & Zähringer, U. (1996) Structural study of a highly O-acetylated core of Legionella pneumophila serogroup 1 lipopolysaccharide. Carbohydr. Res., 293, 223-234. [PDF] Cited by other papers 14 times.

Knirel, Y.A., Widmalm, G., Senchenkova, S.N., Jansson, P.-E. & Weintraub, A. (1997) Structural studies on the short-chain lipopolysaccharide of Vibrio cholerae O139 Bengal. Eur. J. Biochem., 247, 402-410. [PDF] Cited by other papers 27 times.

Fukuoka, S., Knirel, Y.A., Lindner, B., Moll, H., Seydel, U. & Zähringer, U. (1997) Elucidation of the structure of the core region and the complete structure of the R-type lipopolysaccharide of Erwinia carotovora FERM P-7576. Eur. J. Biochem., 250, 55-62. [PDF] Cited by other papers 17 times.

Zähringer, U., Rettenmaier, H., Senchenkova, S.N. & Knirel, Y.A. (1997) Structure of a new 6-deoxy-α-D-talan from Burkholderia (Pseudomonas) plantarii strain DSM 6535, which is different from the O-chain of the lipopolysaccharide. Carbohydr. Res., 300, 143-151. [PDF] Cited by other papers 17 times.

Shashkov, A.S., Senchenkova, S.N., Nazarenko, E.L., Zubkov, V.A., Gorshkova, N.M., Knirel, Y.A. & Gorshkova, R.P. (1997) Structure of a phosphorylated polysaccharide from Shewanella putrefaciens strain S29. Carbohydr. Res., 303, 333-338. [PDF] Cited by other papers 13 times.

Knirel, Y.A., Moll, H., Helbig, J.H. & Zähringer, U. (1997) Chemical characterization of a new 5,7-diamino-3,5,7,9-tetradeoxynonulosonic acid released by mild acid hydrolysis of the Legionella pneumophila serogroup 1 lipopolysaccharide. Carbohydr. Res., 304, 77-79. [PDF] Cited by other papers 16 times.

Moll, H., Knirel, Y.A., Helbig, J.H. & Zähringer, U. (1997) Identification of an α-D-Manp-(1-->8)-Kdo disaccharide in the inner core region and the structure of the complete core region of the Legionella pneumophila serogroup 1 lipopolysaccharide. Carbohydr. Res., 304, 91-95. [PDF] Cited by other papers 13 times.

Ziolkowski, A., Shashkov, A.S., Swierzko, A., Senchenkova, S.N., Toukach, F.V., Cedzynski, M., Amano, K.-I., Kaca, W. & Knirel, Y.A. (1997) Structures of the O-antigens of Proteus bacilli belonging to OX group (serogroups O1-O3) used in Weil-Felix test. FEBS Lett., 411, 221-224. [PDF] Cited by other papers 7 times.

Lüneberg, E., Zähringer, U., Knirel, Y.A., Steinmann, D., Hartmann, M., Steinmetz, I., Rohde, M., Köhl, J. & Frosch, M. (1998) Phase-variable expression of lipopolysaccharide contributes to the virulence of Legionella pneumophila. J. Exp. Med., 188, 49-60. [PDF] Cited by other papers 31 times.

Velasco, J., Moll, H., Knirel, Y.A., Sinnwell, V., Moriyón, I., & Zähringer, U. (1998) Structural studies on the lipopolysaccharide from a rough strain of Ochrobactrum anthropi containing a 2,3-diamino-2,3-dideoxy-D-glucose disaccharide lipid A backbone. Carbohydr. Res., 306, 283-290. [PDF] Cited by other papers 8 times.

Kocharova, N.A., Vinogradov, E.V., Borisova, S.A., Shashkov, A.S. & Knirel, Y.A. (1998) Identification of Nε-[(R)-1-carboxyethyl]-L-lysine in, and the complete structure of, the repeating unit of the O-specific polysaccharide of Providencia alcalifaciens O23. Carbohydr. Res., 309, 131-133. [PDF] Cited by other papers 3 times.

Zou, C.H., Knirel, Y.A., Helbig, J.H., Zähringer, U. & Mintz, C.S. (1999) Molecular cloning and characterization of a locus responsible for O-acetylation of the O-polysaccharide of Legionella pneumophila serogroup 1 lipopolysaccharide. J. Bacteriol., 181, 4137-4141. [PDF] Cited by other papers 14 times.

Ovod, V., Knirel, Y.A., Samson, R. & Krohn, K. (1999) Immunochemical characterization and taxonomic evaluation of the O polysaccharides of the lipopolysaccharides of Pseudomonas syringae serogroup O1 strains. J. Bacteriol., 181, 6937-6947. [PDF] Cited by other papers 12 times.

Knirel, Y.A., Kocharova, N.A., Hynes, S.O., Widmalm, G., Andersen, L.P., Jansson, P.-E. & Moran, A.P. (1999) Structural studies on lipopolysaccharides of serologically non-typable strains of Helicobacter pylori, AFI and 007, expressing Lewis antigenic determinants. Eur. J. Biochem., 266, 123-131. [PDF] Cited by other papers 21 times.

Hanniffy, O.M., Shashkov, A.S., Moran, A.P., Prendergast, M.M., Senchenkova, S.N., Knirel, Y.A. & Savage, A.V. (1999) Chemical structure of a polysaccharide from Campylobacter jejuni 176.83 (serotype O:41) containing only furanose sugars. Carbohydr. Res., 319, 124-132. [PDF] Cited by other papers 33 times.

Lüneberg, E., Zetzmann, N., Alber, D., Knirel, Y.A., Kooistra, O., Zähringer, U. & Frosch, M. (2000) Cloning and functional characterization of a 30 kb gene locus required for lipopolysaccharide biosynthesis in Legionella pneumophila. Int. J. Med. Microbiol., 290, 37-49. [PDF] Cited by other papers 45 times.

Kocharova, N.A., Knirel, Y.A., Widmalm, G., Jansson, P.-E. & Moran, A.P. (2000) Structure of an atypical O-antigen polysaccharide of Helicobacter pylori containing a novel monosaccharide 3-C-methyl-D-mannose. Biochemistry, 39, 4755-4760. [PDF] Cited by other papers 24 times.

Kawahara, K., Moll, H., Knirel, Y.A., Seydel, U. & Zähringer, U. (2000) Structural analysis of two glycosphingolipids from the lipopolysaccharide-lacking bacterium Sphingomonas capsulata. Eur. J. Biochem., 267, 1837-1846. [PDF] Cited by other papers 61 times.

Zähringer, U., Moll, H., Hettmann, T., Knirel, Y.A. & Schafer, G. (2000) Cytochrome b558/566 from the archaeon Sulfolobus acidocaldarius has a unique Asn-linked highly branched hexasaccharide chain containing 6-sulfoquinovose. Eur. J. Biochem., 267, 4144-4149. [PDF] Cited by other papers 37 times.

Senchenkova, S.N., Shashkov, A.S., Kecskes, M.L., Ahohuendo, B.C., Knirel, Y.A. & Rudolph, K. (2000) Structure of the O-specific polysaccharides of the lipopolysaccharides of Xanthomonas campestris pv. vignicola GSPB 2795 and GSPB 2796. Carbohydr. Res., 329, 831-838. [PDF] Cited by other papers 18 times.

Perepelov, A.V., Senchenkova, S.N., Shashkov, A.S., Komandrova, N.A., Tomshich, S.V., Shevchenko, L.S., Knirel, Y.A. & Kochetkov, N.K. (2000) First application of triflic acid for selective cleavage of glycosidic linkages in structural studies of a bacterial polysaccharide from Pseudoalteromonas sp. KMM 634. J. Chem. Soc., Perkin Trans. 1, 363-366. [PDF] Cited by other papers 8 times.

Muldoon, J., Shashkov, A.S., Senchenkova, S.N., Tomshich, S.V., Komandrova, N.A., Romanenko, L.A., Knirel, Y.A. & Savage, A.V. (2001) Structure of an acidic polysaccharide from a marine bacterium Pseudoalteromonas distincta KMM 638 containing 5-acetamido-3,5,7,9-tetradeoxy-7-formamido-L-glycero-L-manno-nonulosonic acid. Carbohydr. Res., 330, 231-239. [PDF] Cited by other papers 15 times.

Zdorovenko, E.L., Ovod, V., Zatonsky, G.V., Shashkov, A.S., Kocharova, N.A. & Knirel, Y.A. (2001) Location of the O-methyl groups in the O polysaccharide of Pseudomonas syringae pv. phaseolicola. Carbohydr. Res., 330, 505-510. [PDF] Cited by other papers 12 times.

Tsvetkov, Y.E., Shashkov, A.S., Knirel, Y.A. & Zähringer, U. (2001) Synthesis and identification in bacterial lipopolysaccharides of 5,7-diacetamido-3,5,7,9-tetradeoxy-D-glycero-D-galacto- and -D-glycero-D-talo-nonulosonic acids. Carbohydr. Res., 331, 233-237. [PDF] Cited by other papers 23 times.

Tsvetkov, Y.E., Shashkov, A.S., Knirel, Y.A. & Zähringer, U. (2001) Synthesis and NMR spectroscopy of nine stereoisomeric 5,7-diacetamido-3,5,7,9-tetradeoxynon-2-ulosonic acids. Carbohydr. Res., 335, 221-243. [PDF] Cited by other papers 31 times.

Knirel, Y. A., Senchenkova, S. N., Kocharova, N. A., Shashkov, A. S., Helbig, J. H. & Zähringer, U. (2001) Identification of a homopolymer of 5-acetamidino-7-acetamido-3,5,7,9-tetradeoxy-D-glycero-D-talo-non-2-ulosonic acid in ipopolysaccharides of Legionella pneumophila non-1 serogroups. Biochemistry (Moscow), 66, 1035-1041. [PDF] Cited by other papers 6 times.

Knirel, Y. A., Bystrova, O. V., Shashkov, A. S., Kocharova, N. A., Senchenkova, S. N., Moll, H., Lindner, B., Zähringer, U., Hatano, K. & Pier, G. B. (2001) Structural analysis of the lipopolysaccharide core of a rough, cystic fibrosis isolate of Pseudomonas aeruginosa. Eur. J. Biochem., 268, 4708-4719. [PDF] Cited by other papers 21 times.

Kooistra, O., Lüneberg, E., Lindner, B., Knirel, Y.A., Frosch, M. & Zähringer, U. (2001) Complex O-acetylation in Legionella pneumophila serogroup 1 lipopolysaccharide. Evidence for two genes involved in 8-O-acetylation of legionaminic acid. Biochemistry, 40, 7630-7640. [PDF] Cited by other papers 16 times.

Katzenellenbogen, E., Kocharova, N.A., Zatonsky G.V., Kübler-Kielb, J., Gamian, A., Shashkov, A.S., Knirel, Y.A. & Romanowska, E. (2001) Structural and serological studies on Hafnia alvei O-specific polysaccharide of α-D-mannan type isolated from the lipopolysaccharide of strain PCM 1223. FEMS Immunol. Med. Microbiol., 30, 223-227. [PDF] Cited by other papers 12 times.

Lück, P.C., Freier, T., Steudel, C., Knirel, Y.A., Lüneberg, E., Zähringer, U. & Helbig, J.H. (2001) A point mutation in the active site of Legionella pneumophila O-acetyltransferase results in modified lipopolysaccharide but does not influence virulence. Int. J. Med. Microbiol., 291, 345-352. [PDF] Cited by other papers 18 times.

Kooistra, O., Lüneberg, E., Knirel, Y. A., Frosch, M. & Zähringer, U. (2002) N-Methylation in polylegionaminic acid is associated with the phase-variable epitope of Legionella pneumophila serogroup 1 lipopolysaccharide. Eur. J. Biochem., 269, 560-572. [PDF] Cited by other papers 14 times.

Bystrova, O.V., Shashkov, A. S., Kocharova, N. A., Knirel, Y. A., Lindner, B., Zähringer, U. & Pier, G. B. (2002) Structural studies on the core and the O-polysaccharide repeating unit of Pseudomonas aeruginosa immunotype 1 lipopolysaccharide. Eur. J. Biochem., 269, 2194-2203. [PDF] Cited by other papers 18 times.

Grozdanov, L., Zähringer, U., Blum-Oehler, G., Brade, L., Henne, A., Knirel, Y.A., Schombel, U., Schulze, J., Sonnenborn, U., Gottschalk, G., Hacker, J., Rietschel, E.T. & Dobrindt, U. (2002) A single nucleotide exchange in the wzy gene is responsible for the semirough O6 lipopolysaccharide phenotype and serum sensitivity of Escherichia coli strain Nissle 1917. J. Bacteriol., 184, 5912-5925. [PDF] Cited by other papers 61 times.

Moran, A.P., Knirel, Y.A., Senchenkova, S.N., Widmalm, G., Hynes, S.O. & Jansson, P.-E. (2002) Phenotypic variation in molecular mimicry between Helicobacter pylori lipopolysaccharides and human gastric epithelial cell surface glycoforms. Acid-induced phase variation in Lewis(x) and Lewis(y) expression by H. pylori lipopolysaccharides. J. Biol. Chem., 277, 5785-5795. [PDF] Cited by other papers 54 times.

Vinogradov, E. V., Lindner, B., Kocharova, N. A., Senchenkova, S. N., Shashkov, A. S., Knirel, Y. A., Holst, O., Gremyakova, T. A., Shaikhutdinova, R. Z. & Anisimov, A. P. (2002) The core structure of the lipopolysaccharide from the causative agent of plague, Yersinia pestis. Carbohydr. Res., 337, 775-777. [PDF] Cited by other papers 30 times.

Knirel, Y. A., Shashkov, A. S., Senchenkova, S. N., Merino, S., Tomas, J. M. (2002) Structure of the O-polysaccharide of Aeromonas hydrophila O:34; a case of random O-acetylation of 6-deoxy-L-talose. Carbohydr. Res., 337, 1381-1386. [PDF] Cited by other papers 17 times.

Bystrova, O.V., Lindner, B., Moll, H., Kocharova, N.A., Knirel, Y.A., Zähringer, U. & Pier, G.B. (2003) Structure of the lipopolysaccharide of Pseudomonas aeruginosa O-12 with a randomly O-acetylated core region. Carbohydr. Res., 338, 1895-1905. [PDF] Cited by other papers 13 times.

Färnbäck, M., Eriksson, L., Senchenkova, S.N., Zych, K., Knirel, Y.A., Sidorczyk, Z. & Widmalm, G. (2003) Crystal structure of a cyclic enterobacterial common antigen. Angew. Chem. Int. Ed., 42, 2543-2546. [PDF] Cited by other papers 4 times.

Zdorovenko, E.L., Vinogradov, E.V., Zdorovenko, G.M., Lindner, B., Bystrova, O.V., Shashkov, A.S., Rudolph, K., Zähringer, U. & Knirel, Y.A. (2004) Structure of the core oligosaccharide of a rough-type lipopolysaccharide of Pseudomonas syringae pv. phaseolicola. Eur. J. Biochem., 271, 4968-4977. [PDF] Corrigendum in: FEBS J., 272, 1815 (2005).[PDF] Cited by other papers 9 times.

Feng, L., Senchenkova, S.N., Yang, J., Shashkov, A.S., Tao, J., Guo, H., Zhao, G., Knirel, Y.A., Reeves, P. & Wang, L. (2004) Structural and genetic characterization of the Shigella boydii type 13 O-antigen. J. Bacteriol., 186, 383-392. [PDF] Cited by other papers 16 times.

Feng, L., Senchenkova, S.N., Yang, J., Shashkov, A.S., Tao, J., Guo, H., Cheng, J., Ren, Y., Knirel, Y.A., Reeves, P. & Wang, L. (2004) Synthesis of the heteropolysaccharide O-antigen of Escherichia coli O52 requires an ABC transporter: Structural and genetic evidences. J. Bacteriol., 186, 4510-4519. [PDF] Cited by other papers 18 times.

Zähringer, U., Lindner, B., Knirel, Y.A., Van den Akker, W.M.R., Hiestand, R., Heine, H. & Dehio, C. (2004) Structure and biological activity of the short-chain lipopolysaccharide from Bartonella henselae ATCC49882T. J. Biol. Chem., 279, 21046-21054. [PDF] Cited by other papers 46 times.

Knirel, Y.A., Vinogradov, E.V., Jimenez, N., Merino, S. & Tomas, J.M. (2004) Structural studies on the R-type lipopolysaccharide of Aeromonas hydrophila. Carbohydr. Res., 339, 787-793. [PDF] Cited by other papers 7 times.

Fedonenko, Y.P., Konnova, O.N., Zatonsky, G.V., Shashkov, A.S., Konnova, S.A., Zdorovenko, E.L., Ignatov, V.V. & Knirel, Y.A. (2004) Structure of the O-polysaccharide of the lipopolysaccharide of Azospirillum irakense KBC1. Carbohydr. Res., 339, 1813-1816. [PDF] Cited by other papers 14 times.

Kocharova, N.A., Senchenkova, S.N., Kondakova, A.N., Gremyakov, A.I., Zatonsky, G.V., Shashkov, A.S., Knirel, Y.A. & Kochetkov, N.K. (2004) D- and L-Aspartic acids: new non-sugar components of bacterial polysaccharides. Biochemistry (Moscow), 69, 103-107. [PDF] Cited by other papers 3 times.

Moran, A.P., Shiberu, B., Ferris, J.A., Knirel, Y.A., Senchenkova, S.N., Perepelov, A.V., Jansson, P.-E. & Goldberg, J.B. (2004) Role of Helicobacter pylori rfaJ genes (HP0159 and HP1416) in lipopolysaccharide synthesis. FEMS Microbiol. Lett., 241, 57-65. [PDF] Cited by other papers 4 times.

Knirel, Y.A., Lindner, B., Vinogradov, E.V., Kocharova, N.A., Senchenkova, S.N., Shaikhutdinova, R.Z., Dentovskaya, S.V., Fursova, N.K., Bakhteeva, I.V., Titareva, G.M., Balakhonov, S.V., Holst, O., Gremyakova, T.A., Pier, G.B. & Anisimov, A.P. (2005) Temperature-dependent variations and intraspecies diversity of the structure of the lipopolysaccharide of Yersinia pestis. Biochemistry, 44, 1731-1743. [PDF] Cited by other papers 52 times.

Anisimov, A.P., Dentovskaya, S.V., Titareva, G.M., Bakhteeva, I.V., Shaikhutdinova, R.Z., Balakhonov, S.V., Lindner, B., Kocharova, N.A., Senchenkova, S.N., Holst, O., Pier, G.B. & Knirel, Y.A. (2005) Intraspecies and temperature-dependent variations in susceptibility of Yersinia pestis to bactericidal action of serum and polymyxin B. Infect. Immun., 73, 7324-7331. [PDF] Cited by other papers 28 times.

Knirel, Y.A., Lindner, B., Vinogradov, E.V., Shaikhutdinova, R. Z., Senchenkova, S. N., Kocharova, N. A., Holst, O., Pier, G. B. & Anisimov, A. P. (2005) Cold temperature-induced modifications to the composition and structure of the lipopolysaccharide of Yersinia pestis. Carbohydr. Res., 340, 1625-1630. [PDF] Cited by other papers 15 times.

Feng, L., Senchenkova, S.N., Tao, J., Shashkov, A.S., Liu, B., Shevelev, S.D., Reeves, P., Xu, J., Knirel, Y.A. & Wang, L. (2005) Structural and genetic characterization of enterohaemorrhagic Escherichia coli O145 O antigen and development of an O145 serogroup-specific PCR assay. J. Bacteriol., 187, 758-764. [PDF] Cited by other papers 37 times.

Feng, L., Senchenkova, S.N.,Wang, W., Shashkov, A.S., Liu, B., Shevelev, S.D., Liu, D., Knirel, Y.A. & Wang, L. (2005) Structural and genetic characterization of the Shigella boydii type 18 O antigen. Gene, 355, 79-86. [PDF] Cited by other papers 5 times.

Katzenellenbogen, E., Kocharova, N.A., Zatonsky, G.V., Shashkov, A.S., Bogulska, M. & Knirel, Y.A. (2005) Structures of the biological repeating units in the O-chain polysaccharides of Hafnia alvei strains having a typical lipopolysaccharide outer core region. FEMS Immunol. Med. Microbiol., 45, 269-278. [PDF] Cited by other papers 8 times.

Kondakova, A.N., Vinogradov, E.V., Knirel, Y.A. & Lindner, B. (2005) Application of electrospray ionization with Fourier transform ion cyclotron resonance mass spectrometry for structural screening of core oligosaccharides from lipopolysaccharides of the bacteria Proteus. Rapid Commun. Mass Spectrom., 19, 2343-2349. [PDF] Cited by other papers 7 times.

Senchenkova, S.N., Feng, L., Wang, Q., Perepelov, A.V., Qin,D., Shevelev, S.D., Wang, M., Shashkov, A.S., Knirel, Y.A. & Wang, L. (2006) Structural and genetic characterization of Shigella boydii type 17 O antigen and confirmation of two new genes involved in the synthesis of glucolactilic acid. Biochem. Biophys. Res. Commun., 349, 289-295. [PDF] Cited by other papers 3 times.

Bystrova, O.V., Knirel, Y.A., Lindner, B., Kocharova, N.A., Zähringer, U. & Pier, G.B. (2006) Structures of the core oligosaccharide and O-units in the R- and SR-type lipopolysaccharides of reference strains of Pseudomonas aeruginosa. FEMS Immunol. Med. Microbiol., 46, 85-99. [PDF] Cited by other papers 28 times.

Kondakova, A.N., Vinogradov, E.V., Lindner, B., Kocharova, N.A., Rozalski, A. & Knirel, Y.A. (2006) Elucidation of the lipopolysaccharide core structures of bacteria of the genus Providencia. J. Carbohydr. Chem., 25, 499-520. [PDF] Cited by other papers 1 time.

Feng, L., Perepelov, A.V., Zhao, G., Shevelev, S.D., Wang, Q., Senchenkova, S.N., Shashkov, A.S., Geng, Y., Reeves,P.R., Knirel, Y.A. & Wang, L. (2007) Structural and genetic evidence that the Escherichia coli O148 O antigen is the precursor of the Shigella dysenteriae type 1 O antigen and identification of a glucosyltransferase gene. Microbiology, 153, 139-147. [PDF] Cited by other papers 16 times.

Wang, W., Perepelov, A.V., Feng, L., Shevelev, S.D., Wang, Q., Senchenkova, S.N., Han, W., Li, Y., Shashkov, A.S., Knirel, Y.A., Reeves, P.R. & Wang, L. (2007) A group of Escherichia coli and Salmonella enterica O antigens sharing a common backbone structure. Microbiology, 153, 2159-2167. [PDF] Cited by other papers 18 times.

Vilches, S., Canals, R., Wilhelms, M., Sato, M.T., Knirel, Y.A., Vinogradov, E., Merino, S. & Tomas, J.M. (2007) Mesophilic Aeromonas UDP-glucose pyrophosphorylase (GalU) mutants show two types of lipopolysaccharide structures and reduced virulence. Microbiology, 153, 2393-2404. [PDF] Cited by other papers 19 times.

Wang, Y., Xu, Y., Perepelov, A.V., Qi, Y., Knirel, Y.A., Wang, L. & Feng, L. (2007) Biochemical characterization of dTDP-D-Qui4N and dTDP-D-Qui4NAc biosynthetic pathways in Shigella dysenteriae type 7 and Escherichia coli O7. J. Bacteriol., 189, 8626-8635. [PDF] Cited by other papers 11 times.

Anisimov, A.P., Shaikhutdinova, R.Z., Pan'kina, L.N., Feodorova, V.A., Savostina, E.P., Bystrova, O.V., S.A., Lindner, B., Mokrievich, A. N., Bakhteeva, I. V., Titareva, G.M., Dentovskaya, S.V., Kocharova, N.A., Senchenkova, S.N., Holst, O., Devdariani, Z.L., Popov, Y. A., Pier, G.B. & Knirel, Y.A. (2007) Effect of deletion of the lpxM gene on virulence and vaccine potential of Yersinia pestis in mice. J. Med. Microbiol., 56, 443-453. [PDF] Cited by other papers 9 times.

Feodorova, V.A., Pan'kina, L.N., Savostina, E.P., Sayapina, L.V., Motin, V.L., Dentovskaya, S.V., Shaikhutdinova, R.Z., Ivanov, S.A., Lindner, B., Kondakova, A.N., Bystrova, O.V., Kocharova, N.A., Senchenkova, S.N., Holst, O., Pier, G.B., Knirel, Y.A. & Anisimov, A.P. (2007) A Yersinia pestis lpxM-mutant live vaccine induces enhanced immunity against bubonic plague in mice and guinea pigs. Vaccine, 25, 7620-7628. [PDF] Cited by other papers 19 times.

Kondakova, A.N., Vinogradov, E.V., Lindner, B., Kocharova, N.A., Rozalski, A. & Knirel, Y.A. (2007) Mass-spectrometric studies of Providencia SR-form lipopolysaccharides and elucidation of the biological repeating unit structure of Providencia rustigianii O14-polysaccharide. J. Carbohydr. Chem., 26, 497-512. [PDF] Cited by other papers 4 times.

Toukach, P., Joshi, H.J., Ranzinger, R., Knirel, Y. & von der Lieth, C.-W. (2007) Sharing of worldwide distributed carbohydrate-related digital resources: online connection of the Bacterial Carbohydrate Structure DataBase and GLYCOSCIENCES.de. Nucleic Acids Res., 35, D280-D286. [PDF] Cited by other papers 18 times.

Herget, S., Toukach, P.V., Ranzinger, R., Hull, W.E., Knirel, Y.A. & von der Lieth, C.-W. (2008) Statistical analysis of the Bacterial Carbohydrate Structure Data Base (BCSDB): Characteristics and diversity of bacterial carbohydrates in comparison with mammalian glycans. BMC Struct. Biol., 8, 35. [PDF] Cited by other papers 28 times.

Kocharova, N.A., Kondakova, A.N., Vinogradov, E., Ovchinnikova, O.G., Lindner, B., Shashkov, A.S., Rozalski, A. & Knirel, Y.A. (2008) Full structure of the carbohydrate chain of the lipopolysaccharide of Providencia rustigianii O34. Chem. Eur. J., 14, 6184-6191. [PDF] Cited by other papers 6 times.

Kondakova, A.N., Ho, N., Bystrova, O.V., Shashkov, A.S., Lindner, B., Creuzenet, C. & Knirel, Y.A. (2008) Structural studies of the O-antigens of Yersinia pseudotuberculosis O:2a and mutants thereof with impaired 6-deoxy-D-manno-heptose biosynthesis pathway. Carbohydr. Res., 343, 1383-1389. [PDF] Cited by other papers 10 times.

Ho, N., Kondakova, A.N., Knirel, Y.A. & Creuzenet, C. (2008) The biosynthesis and biological role of 6-deoxyheptose in the lipopolysaccharide O-antigen of Yersinia pseudotuberculosis. Mol. Microbiol., 68, 424-447. [PDF] Cited by other papers 4 times.

Zdorovenko, E.L., Vinogradov, E., Wydra, K., Lindner, B. & Knirel, Y.A. (2008) Structure of the oligosaccharide chain of the SR-type lipopolysaccharide of Ralstonia solanacearum Toudk-2. Biomacromolecules, 9, 2215-2220. [PDF] Cited by other papers 7 times.

Dentovskaya, S.V., Bakhteeva, I.V., Titareva, G. M., Shaikhutdinova, R.Z., Kondakova, A.N., Bystrova, O.V., Lindner, B., Knirel, Y.A. & Anisimov, A.P. (2008) Structural diversity and endotoxic activity of the lipopolysaccharide of Yersinia pestis. Biochemistry (Moscow), 73, 192-199. [PDF] Cited by other papers 6 times.

Wang, Q., Ding, P., Perepelov, A.V., Xu, Y., Wang, Y., Knirel, Y.A., Wang, L. & Feng L. (2008) Characterization of the dTDP-D-fucofuranose biosynthetic pathway in Escherichia coli O52. Mol. Microbiol., 70, 1358-1367. [PDF] Cited by other papers 8 times.

Jimenez, N., Canals, R., Lacasta, A., Kondakova, A.N., Lindner, B., Knirel, Y.A., Merino, S., Regue, M. & Tomas, J.M. (2008) Molecular analysis of three Aeromonas hydrophila AH-3 (serotype O34) lipopolysaccharide core biosynthesis gene clusters. J. Bacteriol., 190, 3176-3184. [PDF] Cited by other papers 5 times.

Shashkov, A.S., Kocharova, N.A., Toukach, F.V., Kachala, V.V. & Knirel, Y.A. (2008) 2,4-Dihydroxypentanoic acids: new non-sugar components of bacterial polysaccharides. Nat. Prod. Commun., 3, 1625-1630. [PDF] Cited by other papers 1 time.

Knirel, Y.A., Kondakova, A.N., Bystrova, O.V., Lindner, B., Shaikhutdinova, R.Z., Dentovskaya, S.V. & Anisimov, A.P. (2008) New features of Yersinia lipopolysaccharide structures as revealed by high-resolution electrospray ionization mass spectrometry. Adv. Sci. Lett., 1, 192-198. [PDF] Cited by other papers 4 time.

Knirel, Y.A., Senchenkova, S.N., Shashkov, A.S., Perepelov, A.V., Shevelev, S.D., Liu, B., Feng, L. & Wang, L. (2009) First isolation and identification of a derivative of 5,7-diamino-3,5,7,9-tetradeoxy-L-glycero-D-galacto-non-2-ulosonic (8-epilegionaminic) acid. Adv. Sci. Lett., 2, 384-387. [PDF] Cited by other papers 4 times.

Kocharova, N.A., Kondakova, A.N., Ovchinnikova, O.G., Perepelov, A.V., Shashkov, A.S. & Knirel, Y.A. (2009) N-(1-Carboxyethyl)alanine (alanopine), a new non-sugar component of lipopolysaccharides of Providencia and Proteus. Carbohydr. Res., 344, 2060-2062. [PDF] Cited by other papers 2 times.

Kondakova, A.N., Vinogradov, E., Katzenellenbogen, E., Kocharova, N.A., Lindner, B. & Knirel, Y.A. (2009) Structural studies on the lipopolysaccharide core of bacteria of the genus Citrobacter: two different core structures in Citrobacter O14 serogroup. J. Carbohydr. Chem., 28, 298-315. [PDF] Cited by other papers 1 time.

Lewis, A.L., Desa, N., Hansen, E.E., Knirel, Y.A., Gordong, J.I., Gagneux, P., Nizet, V. & Varki, A. (2009) Innovations in host and microbial sialic acid biosynthesis revealed by phylogenomic prediction of nonulosonic acid structure. Proc. Natl. Acad. Sci. U.S.A., 106, 13552-13557. [PDF] Cited by other papers 30 times.

Telepnev, M.V., Klimpel, G.R., Haithcoat, J., Knirel, Y.A., Anisimov, A.P. & Motin, V.L. (2009) Tetraacylated lipopolysaccharide of Yersinia pestis can inhibit multiple Toll-like receptor (TLR)-mediated signaling pathways in human dendritic cells. J. Infect. Dis., 200, 1694-1702. [PDF] Corrigendum in: J. Infect. Dis., 201, 314 (2010). [PDF] Cited by other papers 13 times.

Feodorova, V.A., Pan'kina, L.N., Savostina, E.P., Kuznetsov, O.V., Konnov, N.P., Sayapina, L.V., Dentovskaya, S.V., Shaikhutdinova, R.Z., Ageev, S.A., Lindner, B., Kondakova, A.N., Kocharova, N.A., Senchenkova, S.N., Holst, O., Pier, G.B., Knirel, Y.A., Anisimov, A.P. & Motin, V.L. (2009) Pleiotropic effects of the lpxM mutation in Yersinia pestis resulting in modification of the biosynthesis of major immunoreactive antigens. Vaccine, 27, 2240-2250. [PDF] Cited by other papers 10 times.

Arbatsky, N.P., Kondakova, A.N., Shashkov, A.S., Drutskaya, M.S., Belousov, P.V., Nedospasov, S.A., Petrova, M.A. & Knirel, Y.A. (2010) Structure of the O-antigen of Acinetobacter lwoffii EK30A; identification of D-homoserine, a novel non-sugar component of bacterial polysaccharides. Org. Biomol. Chem., 8, 3571-3577. [PDF] Cited by other papers 1 time.

Liu, B., Perepelov, A.V., Svensson, M.V., Shevelev, S.D., Guo, D., Senchenkova, S.N., Shashkov, A.S., Weintraub, A., Feng, L., Widmalm, G., Knirel, Y.A. & Wang, L. (2010) Genetic and structural relationships of Salmonella O55 and Escherichia coli O103 O-antigens and identification of a 3-hydroxybutanoyltransferase gene involved in the synthesis of a Fuc3N derivative. Glycobiology, 20, 679-688. [PDF] Cited by other papers 6 times.

Liu, B., Perepelov, A.V., Li, D., Senchenkova, S.N., Han, Y., Shashkov, A.S., Feng, L., Knirel, Y.A. & Wang, L. (2010) Structure of the O-antigen of Salmonella O66 and the genetic basis for similarity and differences between the closely related O-antigens of Escherichia coli O166 and Salmonella O66. Microbiology, 156, 1642-1649. [PDF] Cited by other papers 3 times.

Ren, Y., Perepelov, A.V., Wang, H., Zhang, H., Knirel, Y.A., Wang, L. & Chen, W. (2010) Biochemical characterization of GDP-L-fucose de novo synthesis pathway in fungus Mortierella alpina. Biochem. Biophys. Res. Commun., 391, 1663-1669. [PDF] Cited by other papers 5 times.

Wang, Q., Xu, Y., Perepelov, A.V., Wei, D., Shashkov, A.S., Xiong, W., Knirel, Y.A., Feng, L. & Wang, L. (2010) Characterization of the CDP-2-glycerol biosynthetic pathway in Streptococcus pneumoniae. J. Bacteriol., 192, 5506-5514. [PDF] Cited by other papers 3 times.

Suomalainen, M., Lobo, L.A., Brandenburg, K., Lindner, B., Virkola, R., Knirel, Y.A., Anisimov, A.P., Holst, O. & Korhonen, T.K. (2010) Temperature-induced changes in the lipopolysaccharide of Yersinia pestis affect plasminogen activation by the Pla surface protease. Infect. Immun., 78, 2644-2652. [PDF] Cited by other papers 12 times.

Arbatsky N.P., Wang M., Shashkov A.S., Feng L., Knirel Y.A. & Wang L. (2010) Structure of the O-polysaccharide of Cronobacter sakazakii O1 containing 3-(N-acetyl-L-alanyl)amino-3,6-dideoxy-D-glucose. Carbohydr. Res., 345, 2095-2098. [PDF] Cited by other papers 11 times.

Mokrievich, A.N., Kondakova, A.N., Valade, E., Platonov, M.E., Vakhrameeva, G.M., Shaikhutdinova, R.Z., Mironova, R.I., Blaha, D., Bakhteeva, I.V., Titareva, G.M., Kravchenko, T.B., Kombarova, T.I., Vidal, D., Pavlov, V.M., Lindner, B., Dyatlov, I.A. & Knirel, Y.A. (2010) Biological properties and structure of the lipopolysaccharide of a vaccine strain of Francisella tularensis generated by inactivation of a quorum sensing system gene qseC. Biochemistry (Moscow), 75, 443-451. [PDF] Cited by other papers 6 times.

Kiljunen, S., Datta, N., Dentovskaya, S.V., Anisimov, A.P., Knirel, Y.A., Bengoechea, J.A., Holst, O. & Skurnik, M. (2011) Identification of the lipopolysaccharide core of Yersinia pestis and Yersinia pseudotuberculosis as the receptor for bacteriophage φA1122. J. Bacteriol., 193, 4963-4972. [PDF] Cited by other papers 13 times.

Feinberg, H., Taylor, M.E., Razi, N., McBride, R., Knirel, Y.A., Graham, S.A., Drickamer, K. & Weis, W.I. (2011) Structural basis for langerin recognition of diverse pathogen and mammalian glycans through a single binding site. J. Mol. Biol., 405, 1027-1039. [PDF] Cited by other papers 26 times.

Valueva, O.A., Rakhuba, D., Shashkov, A.S., Zdorovenko, E.L., Kisileva, E., Novik, G. & Knirel, Y.A. (2011) Structure of the major O-specific polysaccharide from the lipopolysaccharide of Pseudomonas fluorescens BIM B-582: identification of 4-deoxy-D-xylo-hexose as a component of bacterial polysaccharides. J. Nat. Prod., 74, 2161-2167. [PDF] Cited by other papers 2 times.

Dentovskaya, S.V., Anisimov, A.P., Kondakova, A.N., Bystrova, O.V., Lindner, B., Svetoch, T.E., Shaikhutdinova, R.Z., Ivanov, S.A., Bakhteeva, I.V., Titareva, G.M. & Knirel, Y.A. (2011) Functional characterization and biological significance of Yersinia pestis lipopolysaccharide biosynthesis genes. Biochemistry (Moscow), 76, 808-822. [PDF] Cited by other papers 7 times.

Knirel, Y.A., Kondakova, A.N., Vinogradov, E., Lindner, B., Perepelov, A.V. & Shashkov, A.S. (2011) Lipopolysaccharide core structures and their correlation with genetic groupings of Shigella strains. A novel core variant in Shigella boydii type 16. Glycobiology, 21, 1362-1372. [PDF] Cited by other papers 1 time.

Sturiale, L., Palmigiano, A., Silipo, A., Knirel, Y.A., Anisimov, A.P., Lanzetta, R., Parrilli, M., Molinaro, A. & Garozzo, D. (2011) Reflectron MALDI TOF and MALDI TOF/TOF mass spectrometry reveal novel structural details of native lipooligosaccharides. J. Mass Spectrom., 46, 1135-1142. [PDF] Cited by other papers 2 times.

Ovchinnikova, O.G., Liu, B., Kocharova, N.A., Shashkov, A.S., Kondakova, A.N., Siwinska, M., Feng, L., Rozalski, A., Wang, L. & Knirel, Y.A. (2012) Structure of a peptidoglycan-related polysaccharide from Providencia alcalifaciens O45. Biochemistry (Moscow), 77, 609-615. [PDF] Cited by other papers 2 times.

Kondakova, A.M., Sevillano, A.M., Shaikhutdinova, R.Z., Lindner, B., Komandrova, N.A., Dentovskaya, S.V., Shashkov, A.S., Anisimov, A.P., Skurnik, M. & Knirel, Y.A. (2012) Revision of the O-polysaccharide structure of Yersinia pseudotuberculosis O:1a; confirmation of the function of WbyM as paratosyltransferase. Carbohydr. Res., 350, 98-102. [PDF] Cited by other papers 3 times.

Belyakov, A.Y., Burygin, G.L., Arbatsky, N.P., Shashkov, A.S., Selivanov, N.Y., Matora, L.Y., Knirel, Y.A. & Shchyogolev, S.Y. (2012) Identification of an O-linked repetitive glycan chain of the polar flagellum flagellin of Azospirillum brasilense Sp7. Carbohydr. Res., 361, 127-132. [PDF] Cited by other papers 7 times.

Kondakova A.N., Novototskaya-Vlasova K.A., Arbatsky N.P., Drutskaya M.S., Shcherbakova V.A., Shashkov A.S., Gilichinsky D.A., Nedospasov S.A. & Knirel Y.A. (2012) Structure of the O-specific polysaccharide from the lipopolysaccharide of Psychrobacter cryohalolentis K5T containing a 2,3,4-triacetamido-2,3,4-trideoxy-L-arabinose moiety. J. Nat. Prod., 75, 2236-2240. [PDF] Cited by other papers 4 times.

Perepelov, A.V., Shekht, M.E., Liu, B., Shevelev, S.D., Ledov, V.A., L'vov, V.L., Senchenkova, S.N., Shashkov, A.S., Feng, L., Aparin, P.G., Wang, L. & Knirel, Y.A. (2012) Shigella flexneri O-antigens revisited: final elucidation of the O-acetylation profiles and a survey of the O-antigen structure diversity. FEMS Immunol. Med. Microbiol., 66, 201-210. [PDF] Cited by other papers 12 times.

Sun Y., Arbatsky N.P., Wang M., Shashkov A.S., Liu B., Wang L. & Knirel Y.A. (2012) Structure and genetics of the O-antigen of Cronobacter turicensis G3882 from a new serotype, C. turicensis O2, and identification of a serotype-specific gene. FEMS Immunol. Med. Microbiol., 66, 323-333. [PDF] Cited by other papers 7 times.

Wang Q., Perepelov A.V., Wen L., Shashkov A.S., Wang X., Guo X., Wang L. & Knirel Y.A. (2012) Identification of the two glycosyl transferase genes responsible for the difference between Escherichia coli O107 and O117 O-antigens. Glycobiology, 22, 281-287. [PDF] Cited by other papers 1 time.

Liu, B., Chen, M., Perepelov, A.V., Liu, J., Ovchinnikova, O.G., Zhou, D., Feng, L., Rozalski, A., Knirel, Y.A. & Wang, L. (2012) Genetic analysis of the O-antigen of Providencia alcalifaciens O30 and biochemical characterization of a formyltransferase involved in the synthesis of a Qui4N derivative. Glycobiology, 22, 1236-1244. [PDF] Cited by other papers 3 times.

Wang, Q., Perepelov, A.V., Beutin, L., Senchenkova, S.N., Xu, Y., Shashkov, A.S., Ding, P., Knirel, Y.A. & Feng, L. (2012) Structural and genetic characterization of the Escherichia coli O180 O antigen and identification of a UDP-GlcNAc 6-dehydrogenase. Glycobiology, 22, 1321-1331. [PDF]

Wang, Q., Perepelov, A.V., Xu, Y, Knirel, Y.A., Reeves, P.R., Shashkov, A.S., Ding, P., Guo, X. & Feng, L. (2012) Characterization of the CDP-D-mannitol biosynthetic pathway in Streptococcus pneumoniae 35A. Glycobiology, 22, 1760-1767. [PDF] Cited by other papers 1 time.

Wang, Q., Xu, Y., Perepelov, A., Knirel, Y., Reeves, P.R., Shashkov, A., Guo, X., Ding, P. & Feng, L. (2012) Biochemical characterization of the CDP-D-arabinitol biosynthetic pathway in Streptococcus pneumoniae 17F. J. Bacteriol., 194, 1868-1874. [PDF] Cited by other papers 3 times.

Jimenez, N., Senchenkova, S.N., Knirel, Y.A., Pieretti, G., Corsaro, M.M., Aquilini, E., Regue, M., Merino, S. & Tomas, J.M. (2012) Effects of LPS biosynthesis mutations on K1 polysaccharide association with the Escherichia coli cell surface. J. Bacteriol., 194, 3356-3367. [PDF] Cited by other papers 5 times.

Ovchinnikova, O.G., Liu, B., Guo, D., Kocharova, N.A., Shashkov, A.S., Chen, M., Feng, L., Rozalski, A., Knirel, Y.A. & Wang, L. (2012) Localization and molecular characterization of putative O-antigen gene clusters of Providencia species. Microbiology, 158, 1024-1036. [PDF] [Suppl. material] Cited by other papers 4 times.

Ittig, S., Lindner, B., Stenta, M., Manfredi, P., Zdorovenko, E., Knirel, Y.A., del Peraro, M., Cornelis, G.R. & Zähringer, U. (2012) The lipopolysaccharide from Capnocytophaga canimorsus reveals an unexpected role of the core-oligosaccharide in MD-2 binding. PLoS Pathog., 8(5), e1002667. [PDF] Cited by other papers 10 times.

Merino, S., Bouamama, L., Knirel, Y.A., Senchenkova, S.N., Regue, M. & Tomas, J.M. (2012) Aeromonas surface glucan attached through the O-antigen ligase represents a new way to obtain UDP-glucose. PLoS One, 7(5), e35707. [PDF] Cited by other papers 1 time.

Sun, Q., Knirel, Y.A., Lan, R., Wang, J., Senchenkova, S.N., Jin, D., Shashkov, A.S., Xia, S., Perepelov, A.V., Chen, Q., Wang, Y., Wang, H. & Xu, J. (2012) A novel plasmid-encoded serotype conversion mechanism through addition of phosphoethanolamine to the O-antigen of Shigella flexneri. PLoS One, 7(9), e46095. [PDF] Cited by other papers 11 times.

Merino, S., Knirel, Y.A., Regue, M. & Tomas, J.M. (2013) Experimental identification of Actinobacillus pleuropneumoniae strains L20 and JL03 heptosyltransferases, evidence for a new heptosyltransferase signature sequence. PLoS One, 8(1), e55546. [PDF]

Sun, Q., Lan, R., Wang, J., Xia, S., Wang, Y., Wang, Y., Jin, D., Yu, B., Knirel, Y.A. & Xu, J. (2013) Identification and characterization of a novel Shigella flexneri serotype Yv in China. PLoS One, 8(7), e70238. [PDF] Cited by other papers 7 times.

Ovchinnikova, O.G., Valueva, O.A., Kocharova, N.A., Arbatsky, N.P., Maszewska, A., Zablotni, A., Shashkov, A.S., Rozalski, A. & Knirel, Y.A. (2013) Structure of the O-polysaccharide of Providencia alcalifaciens O35 containing an N-[(S)-1-carboxyethyl]-L-alanine (alanopine) derivative of 4-amino-4,6-dideoxyglucose. Carbohydr. Res., 375, 73-78. [PDF] Cited by other papers 1 time.

Siwinska, M., Shashkov, A.S., Kondakova, A.N., Drzewiecka, D., Zablotni, A., Arbatsky, N.P., Valueva, O.A., Zych, K., Sidorczyk, Z. & Knirel, Y.A. (2013) Structure of the alanopine-containing O-polysaccharide and serological cross-reactivity of the lipopolysaccharide of Proteus vulgaris HSC 438 classified into a new Proteus serogroup, O76. Microbiology, 159, 1036-1043. [PDF]

Knirel, Y.A., Lan, R., Senchenkova, S.N., Wang, J., Shashkov, A.S., Wang, Y., Perepelov, A.V., Xiong, Y., Xu, J. & Sun, Q. (2013) O-antigen structure of Shigella flexneri serotype Yv and effect of the lpt-O gene variation on phosphoethanolamine modification of S. flexneri O-antigens. Glycobiology, 23, 475-485. [PDF] Cited by other papers 3 times.

Sun, Q,. Knirel, Y.A., Lan, R., Wang, J., Senchenkova, S.N., Shashkov, A.S., Wang, Y., Wang, Y., Luo, X. & Xu, J. (2014) Dissemination and serotype modification potential of pSFxv_2, an O-antigen PEtN modification plasmid in Shigella flexneri. Glycobiology, 24, 305-313. [PDF] Cited by other papers 2 times.

Wang, J., Knirel, Y.A., Lan, R., Senchenkova, S.N., Luo, X., Perepelov, A.V., Wang, Y., Shashkov, A.S., Xu, J. & Sun, Q. (2014) Identification of an O-acyltransferase gene (oacB) that mediates 3- and 4-O-acetylation of rhamnose III in Shigella flexneri O antigens. J. Bacteriol., 196, 1525-1531. [PDF] Cited by other papers 1 time.

Sun, Q., Knirel, Y.A., Wang, J., Luo, X., Senchenkova, S.N., Lan, R., Shashkov, A.S. & Xu, J. (2014) Serotype-converting bacteriophage SfII encodes an acyltransferase protein that mediates 6-O-acetylation of GlcNAc in Shigella flexneri O antigens, conferring on the host a novel O-antigen epitope. J. Bacteriol., 196, 3656-3666. [PDF]

Wang, J., Lan, R., Knirel, Y.A., Luo, X., Wang, Y., Senchenkova, S.N., Shashkov, A.S., Xu, J. & Sun, Q. (2014) Serological identification and prevalence of a novel O-antigen epitope linked to 3- and 4-O-acetylated rhamnose III of lipopolysaccharide in Shigella flexneri. J. Clin. Microbiol., 52, 2033-2038. [PDF]

Zdorovenko, E.L., Varbanets, L.D., Liu, B., Valueva, O.A., Wang, Q., Shashkov, A.S., Garkavaya, E.G., Brovarskaya, O.S., Wang, L. & Knirel, Y.A. (2014) Structure and gene cluster of the O-antigen of Escherichia coli L-19, a candidate strain for a new O-serogroup. Microbiology, 160, 2102-2107. [PDF]

Knirel, Y A., Wang, J., Luo, X., Senchenkova, S.N., Lan, R., Shpirt, A.M., Du, P., Shashkov, A.S., Zhang N., Xu, J. & Sun, Q. (2014) Genetic and structural identification of an O-acyltransferase gene (oacC) responsible for the 3/4-O-acetylation on rhamnose III in Shigella flexneri serotype 6. BMC Microbiol., 14, 266. [PDF] Cited by other papers 1 time.

Senchenkova S.N., Shashkov A.S., Shneider M.M., Arbatsky N.P., Popova A.V., Miroshnikov K.A., Volozhantsev N.V. & Knirel Y.A. (2014) Structure of the capsular polysaccharide of Acinetobacter baumannii ACICU containing di-N-acetylpseudaminic acid. Carbohydr. Res., 391, 89-92. [PDF] Cited by other papers 10 times.

Knirel, Y.A., Gabius, H.-J., Blixt, O., Rapoport, E.M., Khasbiullina, N.R., Shilova, N.V. & Bovin, N.V. (2014) Human tandem-repeat-type galectins bind bacterial non-βGal polysaccharides. Glycoconj. J., 31, 7-12. [PDF] Cited by other papers 3 times.

Aquilini, E., Merino, S., Knirel, Y.A., Regue, M. & Tomas, J.M. (2014) Functional identification of Proteus mirabilis eptC gene encoding a core lipopolysaccharide phosphoethanolamine transferase. Int. J. Mol. Sci., 15, 6689-6702. [PDF]

Stowell, S.R., Arthur, C.M., McBride, R., Berger, O., Razi, N., Heimburg-Molinaro, J., Rodrigues, L.C., Gourdine, J.-P., Noll, A.J., von Gunten, S., Smith, D.F., Knirel, Y.A., Paulson, J.C. & Cummings, R.D. (2014) Microbial glycan microarrays define key features of host-microbial interactions. Nat. Chem. Biol., 10, 470-476. [PDF] Cited by other papers 12 times.

Ranf, S., Gisch, N., Schäffer, M., Illig, T., Westphal, L., Knirel, Y.A., Sanchez-Carballo, P.M., Zähringer, U., Hückelhoven, R., Lee, J.& Scheel, D. (2015) A lectin S-domain receptor kinase mediates lipopolysaccharide sensing in Arabidopsis thaliana. Nat. Immunol., 16, 426-433. [PDF] Cited by other papers 5 times.

\ Korneev K.V., Arbatsky N.P., Molinaro A., Palmigiano A., Shaikhutdinova R.Z., Shneider M.M., Pier G.B., Kondakova A.N., Sviriaeva E.N., Sturiale L., Garozzo D., Kruglov A.A., Nedospasov S.A., Drutskaya M.S., Knirel Y.A. & Kuprash D.V. (2015) Structural relationship of the lipid A acyl groups to activation of murine Toll-like receptor 4 by lipopolysaccharides from pathogenic strains of Burkhoderia mallei, Acinetobacter baumannii, and Pseudomonas aeruginosa. Front. Immunol., 6, Article 595. [PDF]

Knirel, Y.A., Prokhorov, N.S., Shashkov, A.S., Ovchinnikova, O.G., Zdorovenko, E.L., Liu, B., Kostrukova, E.S., Larin, A.K., Golomidova, A.K. & Letarov, A.V. (2015) Variations in the O-antigen biosynthesis and O-acetylation associated with the altered phage sensitivity of Escherichia coli 4s. J. Bacteriol., 197, 905-912. [PDF]

Chen, M., Shpirt, A.M., Guo, X., Shashkov, A.S., Zhuang, Y., Wang, L., Knirel, Y.A. & Liu, B. (2015) Identification serologically, chemically and genetically of two Escherichia coli strains as candidates for new O serogroups. Microbiology, 161, 1790-1796.

Wong, A., Lange, D., Houle, S., Arbatsky, N.P., Valvano, M.A., Knirel, Y.A., Dozois, C.M. & Creuzenet, C. (2015) Role of capsular modified heptose in the virulence of Campylobacter jejuni. Mol. Microbiol., 96, 1136-1158. Cited by other papers 1 time.

Merino, S., Canals, R., Knirel, Y.A. & Tomas, J.M. (2015) Molecular and chemical analysis of the lipopolysaccharide from Aeromonas hydrophila strain AH-1 (serotype O11). Mar. Drugs, 13, 2233-2249. [PDF]

Arbatsky, N.P., Shashkov, A.S., Kirsheva, N.A., Kondakova, A.N., Shaikhutdinova, R.Z., Ivanov, S.A., Anisimov, A.P. & Knirel, Y.A. (2015) Structure of the O-polysaccharide of Photorhabdus temperata subspsp. temperata XlNachT containing a novel branched monosaccharide, 3,6-dideoxy-4-C-[(S)-1,2-dihydroxyethyl]-D-xylo-hexose. Carbohydr. Res., 403, 202-205.

L’vov, V.L., Filatov, A.V., Perepelov, A.V., Shpirt, A.M., Shashkov, A.S., Chizhov, A.O. & Knirel, Y.A. (2016) Solvolysis with trifluoroacetic acid: an efficient method for selective cleavage of polysaccharides. Mendeleev Commun., 26, 279-281.

Knirel, Y.A., Qian, C., Shashkov, A.S., Sizova, O.V., Zdorovenko, E.L., Naumenko, O.I., Senchenkova, S.N., Perepelov, A.V. & Liu, B. (2016) Structural relationships between genetically closely related O-antigens of Escherichia coli and Shigella spp. Biochemistry (Moscow), 81, 600-608. [PDF]

Senchenkova, S.N., Guo, X., Perepelov, A.V., Shashkov, A.S., Weintraub, A., Liu, B., Widmalm, G. & Knirel, Y.A. (2016) Structure and gene cluster of the O-antigen of Escherichia coli O165 containing 5-N-acetyl-7-N-[(R)-3-hydroxybutanoyl]pseudaminic acid. Glycobiology, 26, 335-342.

Shashkov, A.S., Kenyon, J.J., Senchenkova, S.N., Shneider, M.M., Popova, A.V., Arbatsky, N.P., Miroshnikov, K.A., Volozhantsev, N.V., Hall, R.M. & Knirel, Y.A. (2016) Acinetobacter baumannii K27 and K44 capsular polysaccharides have the same K unit but different structures due to the presence of distinct wzy genes in otherwise closely related K gene clusters. Glycobiology, 26, 501-508.

Wittmann, A., Lamprinaki, D., Bowels, K.M., Katzenellenbogen, E., Knirel, Y.A., Nishimura, K., Matsumoto, N., Yamamoto, K., Iwakura, Y., Saijo, S. & Kawasaki, N. (2016) Dectin-2 recognises an O-antigen polysaccharide from a human opportunistic pathogen and augments LPS activation of myeloid cells. J. Biol. Chem., 291, 17629-17638.

Golomidova, A.K., Kulikov, E.E., Prokhorov, N.S., Guerrero-Ferreira, R.C., Knirel, Y.A., Kostryukova, E.S., Tarasyan, K.K. & Letarov, A.V. (2016) Branched lateral tail fiber organization in T5-like bacteriophages DT57C and DT571/2 as revealed by genetic and functional analysis. Viruses, 8, Article 26. [PDF]

Drzewiecka D., Arbatsky N.P., Kondakova A.N., Shashkov A.S. & Knirel Y.A. (2016) Structures and serospecificity of threonine-containing O polysaccharides of two clinical isolates belonging to the genus Proteus and their classification into O11 subserogroups. J. Med. Microbiol., 65, 1260-1266.

Drzewiecka, D., Shashkov, A.S., Arbatsky, N.P. & Knirel, Y. A. (2016) Immunochemical characterization of the O antigens of two Proteus spp. strains, 12 B-r of Proteus mirabilis O2 and O8-related 12 B-k of Proteus genomospecies 5/6, infecting a hospitalized patient in Poland. Microbiology, 162, 789-797.

Wang, M., Arbatsky, N.P., Xu, L., Shashkov, A.S., Wang, L. & Knirel, Y.A. (2016) O antigen of Franconibacter pulveris G3872 (O1) is a 4-deoxy-D-arabino-hexose-containing polysaccharide synthesized by the ABC transporter-dependent pathway. Microbiology, 162, 1103-1113.

Kenyon, J.J., Shneider, M.M., Senchenkova, S.N., Shashkov, A.S., Siniagina, M.N., Malanin, S.Y., Popova, A.V., Miroshnikov, K.A., Hall, R.M. & Knirel, Y.A. (2016) K19 capsular polysaccharide of Acinetobacter baumannii is produced via a Wzy polymerase encoded in a small genomic island rather than the KL19 capsule gene cluster. Microbiology, 162, 1479-1489.

Kenyon, J.J., Kasimova, A.A., Shneider, M.M., Shashkov, A.S., Arbatsky, N.P., Popova, A.V., Miroshnikov, K.A., Hall, R.M. & Knirel ,Y.A. (2017) The KL24 gene cluster and a genomic island encoding a Wzy polymerase contribute genes needed for synthesis of the K24 capsular polysaccharide by the multiply antibiotic resistant Acinetobacter baumannii isolate RCH51. Microbiology, 163, 355-363.

Prokhorov, N.S., Riccio, C., Zdorovenko, E.L., Shneider, M.M., Browning, C., Knirel, Y.A., Leiman, P.G., Letarov, A.V. (2017) Function of bacteriophage G7C esterase tailspike in host cell adsorption. Mol. Microbiol., 105, 355-363.

Kenyon, J.J., Kasimova, A.A., Notaro, A., Arbatsky, N.P., Speciale, I., Shashkov, A.S., De Castro, C., Hall, R.M., Knirel, Y.A. (2017) Acinetobacter baumannii K13 and K73 capsular polysaccharides differ only in K-unit side branches of novel non-2-ulosonic acids: di-N-acetylated forms of either acinetaminic acid or 8-epiacinetaminic acid. Carbohydr. Res., 452, 149-155.

Zdorovenko, E.L., Kadykova, A.A., Shashkov, A.S., Varbanets, L.D., Bulyhina, T.V. & Knirel, Y.A. (2017) Lipopolysaccharide of Pantoea agglomerans 7969: Chemical identification, function and biological activity. Carbohydr. Polym., 165, 351-358.

Knirel, Y.A., Guo, X., Senchenkova, S.N., Perepelov, A.V., Liu, B. & Shashkov, A.S. (2017) Structures and gene clusters of the O-specific polysaccharides of the lipopolysaccharides of Escherichia coli O69 and O146 containing glycolactilic acids: ether conjugates of D-GlcNAc and D-Glc with (R)- and (S)-lactic acid. Glycoconj. J., 34, 71-84.

Hou, X., Perepelov, A.V., Guo, X., Senchenkova, S.N., Shashkov, A.S., Liu, B., Knirel, Y. A., Wang,L. (2017) A gene cluster at an unusual chromosomal location responsible for the O-antigen novel synthesis in Escherichia coli O62 by the ABC transporter-dependent pathway. Glycobiology, 27, 669-676.

Hanske, J., Schulze, J., Aretz, J., McBride, R., Loll, B., Schmidt, H., Knirel, Y., Rabsch, W., Wahl, M.C., Paulson, J.C. & Rademacher, C. (2017) Bacterial polysaccharide specificity of the pattern recognition receptor Langerin is highly species dependent. J. Biol. Chem., 292, 862-871.

Olszak, T., Shneider, M.M., Latka, A., Maciejewska, B., Browning, C., Sycheva, L.V., Comer, J.E., Danis-Wlodarczyk, K., Senchenkova, S.N., Shashkov, A.S., Gula, G., Arabski, M., Wasik, S., Miroshnikov, K.A., Lavigne, R., Leiman, P.G., Knirel, Y.A., Drulis-Kawa, Z. (2017) The O-specific polysaccharide lyase from the phage LKA1 tailspike reduces Pseudomonas virulence. Sci. Rep., 7, 16302. [PDF]

Yu X., Torzewska A., Zhang X., Yin Z., Drzewiecka D., Cao H., Liu B., Knirel Y.A., Rozalski A., Wang L. (2017) Genetic diversity of the O antigens of Proteus species and the development of a suspension array for molecular serotyping. PLoS ONE, 12, e0183267. [PDF]

Kasimova A.A., Kenyon J.J., Arbatsky N.P., Shashkov A.S., Popova A.V., Knirel Y.A., Hall R.M. (2018) Acinetobacter baumannii K20 and K21 capsular polysaccharide structures establish roles for UDP-glucose dehydrogenase Ugd2, pyruvyltransferase Ptr2 and two glycosyltransferases. Glycobiology, 28, 876-884.

Naumenko O.I., Xiong Y., Zheng H., Senchenkova S.N., Wang H., Shashkov A.S., Li Q., Wang J., Knirel Y.A. (2018) Studies on the O-polysaccharide of Escherichia albertii O2 characterized by non-stoichiometric O-acetylation and non-stoichiometric side-chain L-fucosylation. Carbohydr. Res., 461, 80-84.

Korneev K.V., Kondakova A.N., Sviriaeva E.N., Mitkin N.A., Palmigiano A., Kruglov A.A., Telegin G.B., Drutskaya M.S., Sturiale L., Garozzo D., Nedospasov S.A., Knirel Y.A., Kuprash D.V. (2018) Hypoacylated LPS from foodborne pathogen Campylobacter jejuni induces moderate TLR4-mediated inflammatory response in murine macrophages. Front. Cell. Infect. Microbiol., 8, Article 58.

Khasbiullina N.R., Shilova N.V., Navakousky M.E., Nokel A.Y., Knirel Y.A., Blixt O., Bovin N.V. (2018) Repertoire of Abs primed by bacteria in gnotobiotic mice. Innate Immun., 24, 180-187.

Zablotni A., Matusiak D., Arbatsky N.P., Moryl M., Maciejewska A., Kondakova A.N., Shashkov A.S., Lugowski,C., Knirel Y.A., Rozalski A. (2018) Changes in the lipopolysacharide of Proteus mirabilis 9Bm (O11a) clinical strain in response to planktonic or biofilm type of growth. Med. Microbiol. Immunol., 207, 129-139.

Numbers of citations are given according to Scopus or Web of Science as on 31.12.2016; self citations by all authors are excluded.

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