Return to Main Page
SCIENTIFIC PAPERS ON CARBOHYDRATES
1973-1979
1. Dmitriev, B.A., Knirel, Y.A., Kochetkov, N.K.
(1973) Selective cleavage of glycosidic linkages. Studies with the model
compound benzyl 2-acetamido-2-deoxy-3-O-β-D-galactopyranosyl-α-D-glucopyranoside.
Carbohydr. Res., 29, 451-457.
2. Dmitriev, B.A., Knirel, Y.A., Kochetkov, N.K.
(1973) Selective cleavage of glycosidic linkages: Studies with the model
compound benzyl 2-acetamido-2-deoxy-6-O-α-D-mannopyranosyl-α-D-glucopyranoside.
Carbohydr. Res., 30, 45-50.
3. Dmitriev, B.A., Knirel, Y.A., Kochetkov, N.K. (1973) New synthesis of 4-O-(β-D-galactopyranosyl)-2-acetamido-2-deoxy-D-glucose
(N-acetyllactosamine). Izv. Akad. Nauk SSSR, Ser. Khim., 2365-2366 [In
Russian].
4. Dmitriev, B.A., Knirel, Y.A., Kochetkov, N.K. (1974) Synthesis and cleavage
of benzyl 2-acetamido-2-deoxy-4-O-(β-D-galactopyranosyl)-β-D-glucoside.
Izv. Akad. Nauk SSSR, Ser. Khim., 411-416 [In Russian].
5. Dmitriev, B.A., Backinowsky, L.V., Knirel, Y.A., L'vov, V.L., Kochetkov,
N.K. (1974) Antigenic polysaccharides of bacteria. 1. Study of an acidic
polysaccharide from Shigella boydii 6. Izv. Akad. Nauk SSSR, Ser. Khim.,
2335-2338 [In Russian].
6. Dmitriev, B.A., Knirel, Y.A., Kochetkov, N.K.
(1975) Selective cleavage of glycosidic linkages: Studies with the O-specific
polysaccharide from Shigella dysenteriae type 3. Carbohydr. Res., 40, 365-372.
7. Dmitriev, B.A., Backinowsky, L.V., Lvov, V.L., Knirel, Y.A., Kochetkov,
N.K., Khomenko, N.A. (1975) The structure of the chemical repeating-unit of the
O-specific polysaccharide chain of Shigella boydii 6 lipopolysaccharide.
Carbohydr. Res., 41, 329-333.
8. Dmitriev, B.A., Knirel, Y.A., Kochetkov, N.K., Hofman, I.L.
(1975) Selective cleavage of glycosidic linkages: Studies with the
polysaccharide component of Shigella dysenteriae type 6 lipopolysaccharide.
Carbohydr. Res., 44, 77-85.
9. Dmitriev, B.A., Backinowsky, L.V., L'vov, V.L., Knirel, Y.A., Kochetkov,
N.K., Khomenko, N.A. (1975) Antigenic polysaccharides of bacteria. 2. Structure
of the repeating unit of the O-specific chain of Shigella boydii type 6
lipopolysaccharide. Izv. Akad. Nauk SSSR, Ser. Khim., 1168-1172 [In Russian].
10. Dmitriev, B.A., Knirel, Y.A., Hofman, I.L., Kochetkov, N.K. (1975)
Antigenic polysaccharides of bacteria. 3. Structural study of the repeating
unit of the polysaccharide chain of Shigella dysenteriae type 6
lipopolysaccharide. Izv. Akad. Nauk SSSR, Ser. Khim., 2302-2308 [In Russian].
11. Dmitriev, B.A., Knirel, Y.A., Kochetkov, N.K., Hofman, I.L. (1976) Somatic
antigens of Shigella. Structural investigation on the O-specific polysaccharide
chain of Shigella dysenteriae type 1 lipopolysaccharide. Eur. J. Biochem., 66,
559-566.
12. Dmitriev, B.A., Knirel, Y.A., Kochetkov, N.K., Hofman, I.L., Capek, K.
(1977) Somatic antigens of Shigella. Structural investigation on the O-specific
polysaccharide chain of Shigella dysenteriae type-2 lipopolysaccharide. Eur. J.
Biochem., 76, 433-440.
13. Dmitriev, B.A., Backinowsky, L.V., Knirel, Y.A., Kochetkov, N.K., Hofman,
I.L. (1977) Somatic antigens of Shigella. The structure of the specific
polysaccharide chain of Shigella dysenteriae type 5 lipopolysaccharide. Eur. J.
Biochem., 78, 381-387.
14. Dmitriev, B.A., Knirel, Y.A., Kochetkov, N.K., Jann, B., Jann, K. (1977)
Cell-wall lipopolysaccharide of the "Shigella-like" Escherichia coli
O58. Structure of the polysaccharide chain. Eur. J. Biochem., 79, 111-115.
15. Dmitriev, B.A., Knirel, Y.A., Sheremet, O.K., Kochetkov, N.K., Hofman, I.L.
(1977) Antigenic polysaccharides of bacteria. V. The structure of O-specific
polysaccharide chain of Shigella dysenteriae type 10 lipopolysaccharide.
Bioorg. Khim., 3, 1219-1225 [In Russian].
16. Dmitriev, B.A., Knirel, Y.A., Vinogradov, E.V., Kochetkov, N.K., Hofman,
I.L. (1978) Antigenic polysaccharides of bacteria. VII. Structure of
polysaccharide chain of the Shigella dysenteriae type 9 lipopolysaccharide.
Bioorg. Khim., 4, 40-46 [In Russian].
17. Dmitriev, B.A., Knirel, Y.A., Sheremet, O.K., Shashkov, A.S., Kochetkov,
N.K., Hofman, I.L. (1979) Somatic antigens of Shigella. The structure of the
specific polysaccharide of Shigella newcastle (Sh.
flexneri type 6) lipopolysaccharide. Eur. J. Biochem., 98, 309-316.
18. Dmitriev, B.A., Dashunin, V.M., Knirel, Y.A., Kochetkov, N.K., Hofman, I.L.
(1979) Antigenic polysaccharides of bacteria. 9. Identification of 2-amino-2-deoxy-D-galacturonic
acid in O-specific hexosaminoglycan of Shigella dysenteriae type 7. Bioorg. Khim., 5, 77-82 [In
Russian].
19. Shashkov, A.S., Dmitriev, B.A., Knirel, Y.A., Sheremet, O.K., Kochetkov,
N.K. (1979) The 13C NMR spectrum of the
O-specific polysaccharide of Shigella dysenteriae type 10. Bioorg. Khim., 5, 583-587 [In Russian].
1980-1985
20. Dmitriev, B.A., Knirel, Y.A., Kocharova, N.A., Kochetkov, N.K.,
Stanislavsky, E.S., Mashilova, G.M. (1980) Somatic antigens of Pseudomonas
aeruginosa. The structure of the polysaccharide chain of Ps. aeruginosa
O-serogroup 7 (Lanyi) lipopolysaccharide. Eur. J. Biochem., 106, 643-651.
21. Shashkov, A.S., Knirel, Y.A., Kocharova, N.A., Dmitriev, B.A., Kochetkov,
N.K. (1980) The 13C NMR spectrum of the specific polysaccharide of
Pseudomonas aeruginosa O-serotype 7a,b. Bioorg. Khim., 6, 1332-1337 [In Russian].
22. Knirel, Y.A., Shashkov, A.S., Dmitriev, B.A., Kochetkov, N.K., Kasyanchuk,
N.V., Zakharova, I.Y. (1980) Antigenic polysaccharides of bacteria. 11. The
structure and 13C NMR spectrum of the O-specific polysaccharide from
Pseudomonas cepacia. Bioorg. Khim., 6, 1851-1859 [In
Russian].
23. Knirel, Y.A., Kocharova, N.A., Shashkov, A.S., Dmitriev, B.A., Kochetkov,
N.K. (1981) 2,3-Diacetamido-2,3-dideoxy-D-glucuronic
acid: a new acidic amino sugar from Pseudomonas aeruginosa type O6
lipopolysaccharide. Carbohydr. Res., 93, C12-C13.
24. Knirel, Y.A., Vinogradov, E.V., Dmitriev, B.A., Kochetkov, N.K. (1981)
Determination of location of O-acetyl groups in bacterial polysaccharides.
Bioorg. Khim., 7, 463-465 [In Russian].
25. Shashkov, A.S., Usov, A.I., Knirel, Y.A., Dmitriev, B.A., Kochetkov, N.K.
(1981) Determination of the absolute and anomeric configurations of sugar
residues in oligo- and polysaccharides using glycosylation shifts in 13C
NMR spectra. Bioorg. Khim., 7, 1364-1371 [In Russian].
26. Knirel, Y.A., Vinogradov, E.V., Shashkov, A.S., Dmitriev, B.A., Kochetkov,
N.K., Stanislavsky, E.S., Mashilova, G.M. (1982) Somatic antigens of
Pseudomonas aeruginosa. The structure of O-specific polysaccharide chains of P.
aeruginosa O:3a,b and O: 3a,d lipopolysaccharides.
Eur. J. Biochem., 128, 81-90.
27. Knirel, Y.A., Vinogradov, E.V., Shashkov, A.S., Dmitriev, B.A., Kochetkov,
N.K., Stanislavsky, E.S., Mashilova, G.M. (1982) Somatic antigens of
Pseudomonas aeruginosa. The structure of the O-specific polysaccharide chains
of Ps. aeruginosa O:2 (Lanyi) lipopolysaccharides.
Eur. J. Biochem., 128, 221-227.
28. Dmitriev, B.A., Kocharova, N.A., Knirel, Y.A., Shashkov, A.S., Kochetkov,
N.K., Stanislavsky, E.S., Mashilova, G.M. (1982) Somatic antigens of
Pseudomonas aeruginosa. The structure of the polysaccharide chain of Ps.
aeruginosa O:6 (Lanyi) lipopolysaccharide. Eur. J.
Biochem., 125, 229-237.
29. Knirel, Y.A., Vinogradov, E.V., Shashkov, A.S., Dmitriev, B.A., Kochetkov,
N.K. (1982) 2,3-Diacetamido-2,3-dideoxy-D-mannuronic
acid and its 2-imidazoline derivative: new acidic amino sugars from Pseudomonas
aeruginosa O:3a,d lipopolysaccharide. Carbohydr. Res., 104, C4-C7.
30. Knirel, Y.A., Vinogradov, E.V., Shashkov, A.S., Dmitriev, B.A., Kochetkov,
N.K., Stanislavsky, E.S., Mashilova, G.M. (1983) Somatic antigens of
Pseudomonas aeruginosa. The structure of the O-specific polysaccharide chains
of P. aeruginosa O:3(a),c and O:3a,d,e
lipopolysaccharides. Eur. J. Biochem., 134, 289-297.
31. Knirel, Y.A., Vinogradov, E.V., Shashkov, A.S., Dmitriev, B.A., Kochetkov,
N.K. (1983) 2,3-Diacetamido-2,3-dideoxy-L-guluronic
acid: a new acidic amino sugar from Pseudomonas aeruginosa O:3a,d,e
lipopolysaccharide. Carbohydr. Res., 112, C4-C6.
32. Knirel, Y.A., Vinogradov, E.V., Kocharova, N.A., Shashkov, A.S., Dmitriev,
B.A., Kochetkov, N.K. (1983) Synthesis and 13C-n.m.r. spectra of
methyl 2,3-diacetamido-2,3-dideoxy-α-D-hexopyranosides and
2,3-diacetamido-2,3-dideoxy-D-hexoses. Carbohydr. Res., 122, 181-188.
33. Knirel, Y.A., Dmitriev, B.A., Kochetkov, N.K., Stanislavsky, E.S.,
Mashilova, G.M. (1983) O-Antigens of Pseudomonas aeruginosa: structures of the
polysaccharide chains and immunochemical specificity. Mol. Genet. Mikrobiol. Virusol., 13-18 [In Russian].
34. Knirel, Y.A., Vinogradov, E.V., L'vov, V.L., Kocharova, N.A., Shashkov,
A.S., Dmitriev, B.A., Kochetkov, N.K. (1984) Sialic acids of a new type from
the lipopolysaccharides of Pseudomonas aeruginosa and Shigella boydii.
Carbohydr. Res., 133, C5-C8.
35. Shashkov, A.S., Knirel, Y.A., Kasyanchuk, N.V., Dmitriev, B.A., Kochetkov,
N.K. (1984) Non-destructive determination of the monosaccharide composition and
the structure of the O-specific polysaccharide of Pseudomonas cepacia.
Carbohydr. Res., 133, C9-C11.
36. Knirel, Y.A., Shashkov, A.S., Dmitriev, B.A., Kochetkov, N.K. (1984)
Structural studies of the Pseudomonas aeruginosa immunotype 1 antigen,
containing the new sugar constituents: 2-acetamido-2-deoxy-D-galacturonamide
and 2-deoxy-2-formamido-D-galacturonic acid. Carbohydr. Res., 133, C12-C14.
37. Knirel, Y.A., Vinogradov, E.V., Shashkov, A.S., Dmitriev, B.A., Kochetkov,
N.K., Stanislavsky, E.S., Mashilova, G.M. (1985) Somatic antigens of
Pseudomonas aeruginosa. The structure of the O-specific polysaccharide chains
of lipopolysaccharide of P. aeruginosa serogroup O4 (Lanyi) and related
serotype O6 (Habs) and immunotype 1 (Fisher). Eur. J. Biochem., 150, 541-550.
38. Knirel, Y.A., Skvortsov, I.M., Shashkov, A.S., Dmitriev, B.A., Kochetkov,
N.K., Stanislavsky, E.S., Mashilova, G.M. (1985) Somatic antigens of
Pseudomonas aeruginosa. The structure of the O-specific polysaccharide chains
of P. aeruginosa O11 (Lanyi) lipopolysaccharides. Eur. J. Biochem., 150,
551-557.
39. Knirel, Y.A., Vinogradov, E.V., Shashkov, A.S., Kochetkov, N.K., L'vov,
V.L., Dmitriev, B.A. (1985) Identification of
5-acetamido-3,5,7,9-tetradeoxy-7-[(R)-3-
hydroxybutyramido]-L-glycero-L-manno-nonulosonic acid as a component of
bacterial polysaccharides. Carbohydr. Res., 141, C1-C3.
40. Stanislavsky, E.S., Mashilova, G.M., Dmitriev, B.A., Knirel, Y.A.,
Vinogradov, E.V. (1985) The structure and
immunological specificity of O-antigens of Pseudomonas aeruginosa of O3 serogroup.
J. Hyg. Epidemiol. Microbiol. Immunol., 29, 289-295.
41. Knirel, Y.A., Dmitriev, B.A., Kochetkov, N.K., Tanatar, N.V., Zakharova,
I.Y. (1985) Antigenic polysaccharides of bacteria. 13. Structure of the
O-specific polysaccharide chain of a lipopolysaccharide from Pseudomonas
cepacia strain IMV 4137. Bioorg. Khim., 11, 536-538
[In Russian].
42. Knirel, Y.A., Shashkov, A.S., Dmitriev, B.A., Kochetkov, N.K.,
Stanislavsky, E.S., Mashilova, G.M. (1985) Antigenic polysaccharides of
bacteria. 14. Structure of the O-specific polysaccharide chain of a
lipopolysaccharide from Pseudomonas aeruginosa O12. Bioorg. Khim.,
11, 1265-1269 [In Russian].
43. Knirel, Y.A. (1985) Lipopolysaccharides of Gram-negative bacteria (a
review). In Progress in carbohydrate chemistry (Torgov, V.I., ed.) pp. 54-76.
Nauka, Moscow [In Russian].
1986
44. Lipkind, G.M., Shashkov, A.S., Knirel, Y.A., Kochetkov, N.K. (1986)
Experimental and theoretical conformational analysis of the antigenic
polysaccharide of Pseudomonas cepacia strain 3181. I. Disaccharide units.
Bioorg. Khim., 12, 771-779 [In Russian].
45. Lipkind, G.M., Shashkov, A.S., Knirel, Y.A., Kochetkov, N.K. (1986)
Experimental and theoretical conformational analysis of the antigenic
polysaccharide of Pseudomonas cepacia strain 3181. II. Polysaccharide. Bioorg. Khim., 12, 780-788 [In Russian].
46. Knirel, Y.A., Vinogradov, E.V., Shashkov, A.S., Dmitriev, B.A., Kochetkov,
N.K. (1986) Structure of Pseudomonas aeruginosa O13 O-specific polysaccharide
containing 5,7-diacetamido-3,5,7,9-tetradeoxy-D-glycero-L-galacto-nonulosonic
acid and 2-acetamidino-2,6-dideoxy-L-galactose. Bioorg. Khim.,
12, 848-851 [In Russian].
47. Knirel, Y.A., Paramonov, N.A., Vinogradov, E.V., Shashkov, A.S., Kochetkov,
N.K. (1986) Identification of 2,3-diamino-2,3-dideoxy-L-guluronic
acid in Pseudomonas aeruginosa immunotype 7 lipopolysaccharide. Bioorg. Khim., 12, 992-994 [In Russian].
48. Knirel, Y.A., Paramonov, N.A., Vinogradov, E.V., Shashkov, A.S., Dmitriev,
B.A., Kochetkov, N.K. (1986) Structure of Pseudomonas aeruginosa immunotype 3
O-specific polysaccharide; revision of the structure of the acetamidino
derivative of 2,3-diamino-2,3-dideoxy-D-mannuronic acid. Bioorg. Khim., 12, 995-997 [In Russian].
49. Knirel, Y.A., Zdorovenko, G.M., Dashunin, V.M., Yakovleva,L.M., Shashkov,
A.S., Zakharova, I.Y., Gvozdyak, R.I., Kochetkov, N.K. (1986) Antigenic
polysaccharides of bacteria. 15. Structure of the repeating unit of O-specific
polysaccharide chain of Pseudomonas wieringae lipopolysaccharide. Bioorg. Khim., 12, 1253-1262 [In Russian].
50. Knirel, Y.A., Vinogradov, E.V., Paramonov, N.A., Shashkov, A.S., Kochetkov,
N.K., Stanislavsky, E.S., Mashilova, G.M. (1986) Antigenic polysaccharides of
bacteria. 16. Structure of O-specific polysaccharide chain of Pseudomonas
aeruginosa O25 (Wokatsch) lipopolysaccharide. Bioorg. Khim.,
12, 1263-1267 [In Russian].
51. Knirel, Y.A., Kocharova, N.A., Shashkov, A.S., Varbanets, L.D., Kochetkov,
N.K., Stanislavsky, E.S., Mashilova, G.M. (1986) Antigenic polysaccharides of
bacteria. 17. Structure of O-specific polysaccharide chain of Pseudomonas
aeruginosa X (Meitert) lipopolysaccharide. Bioorg. Khim.,
12, 1268-1273 [In Russian].
52. Knirel, Y.A., Kocharova, N.A., Shashkov, A.S., Dmitriev, B.A., Kochetkov,
N.K., Stanislavsky, E.S., Mashilova, G.M. (1986) Antigenic polysaccharides of
bacteria. 18. Structure of O-specific polysaccharide chains of Pseudomonas
aeruginosa O5 (Lanyi) lipopolysaccharides. Bioorg. Khim.,
12, 1384-1390 [In Russian].
53. Knirel, Y.A., Kocharova, N.A., Shashkov, A.S., Kochetkov, N.K. (1986)
Structure of O-specific polysaccharide chains of Pseudomonas aeruginosa II
(Sandvik) and V (Verder-Evans) lipopolysaccharides containing
N-acetyl-D-galactosaminuronic acid. Bioorg. Khim., 12,
1422-1424 [In Russian].
54. Knirel, Y.A., Zdorovenko, G.M., Shashkov, A.S., Zakharova, I.Y., Kochetkov,
N.K. (1986) Antigenic polysaccharides of bacteria. 19. Structure of O-specific
polysaccharide chain of Alcaligenes faecalis lipopolysaccharide. Bioorg. Khim., 12, 1530-1539 [In Russian].
55. Khomenko, V.A., Naberezhnykh, G.A., Isakov, V.V., Solov'eva, T.F., Ovodov,
Y.S., Knirel, Y.A., Vinogradov, E.V. (1986) Structural study of O-specific
polysaccharide chain of Pseudomonas fluorescens lipopolysaccharide. Bioorg. Khim., 12, 1641-1648 [In Russian].
56. Knirel, Y.A., Paramonov, N.A., Vinogradov, E.V., Shashkov, A.S., Dmitriev,
B.A., Kochetkov, N.K., Stanislavsky, E.S. (1986) Antigenic polysaccharides of
bacteria. 20. Structure of the O-specific polysaccharide chain of Pseudomonas
aeruginosa O(3a),3d,3f (Lanyi) lipopolysaccharide.
Bioorg. Khim., 12, 1649-1657 [In Russian].
57. El'kin, Y.N., Knirel, Y.A., Vinogradov, E.V., Paramonov, N.A., Troshkov,
M.L., Aminev, I.H. (1986) Fast-atom-bombardment mass spectra of amino
oligosaccharides. Bioorg. Khim., 12, 1658-1661 [In
Russian].
58. Knirel, Y.A., Vinogradov, E.V., Shashkov, A.S., Wilkinson, S.G., Tahara,
Y., Dmitriev, B.A., Kochetkov, N.K., Stanislavsky, E.S., Mashilova, G.M. (1986)
Somatic antigens of Pseudomonas aeruginosa. The structure of O- specific
polysaccharide chains of the lipopolysaccharides from P.aeruginosa O1 (Lanyi),
O3 (Habs), O13 and O14 (Wokatsch), and the serologically related strain NCTC
8505. Eur. J. Biochem., 155, 659-669.
59. Knirel, Y.A., Vinogradov, E.V., Shashkov, A.S., Dmitriev, B.A., Kochetkov,
N.K., Stanislavsky, E.S., Mashilova, G.M. (1986) Somatic antigens of
Pseudomonas aeruginosa. The structure of O- specific polysaccharide chains of
P. aeruginosa O10 (Lanyi) lipopolysaccharides. Eur. J. Biochem., 157, 129-138.
60. Knirel, Y.A., Kocharova, N.A., Shashkov, A.S., Kochetkov, N.K. (1986) The
structure of the Pseudomonas aeruginosa immunotype 6 O-antigen: isolation and
identification of 5-acetamido-3,5,7,9-
tetradeoxy-7-formamido-L-glycero-L-manno-nonulosonic acid. Carbohydr. Res.,
145, C1-C4.
61. Shashkov, A.S., Knirel, Y.A., Tanatar, N.V., Kochetkov, N.K. (1986)
Application of n.m.r. spectroscopy, including n.O.e. studies, to the O-specific
polysaccharide from Pseudomonas cepacia strain IMV 3181. Carbohydr. Res., 146,
346-349.
1987
62. Knirel, Y.A., Kocharova, N.A., Shashkov, A.S., Kochetkov, N.K., Kholodkova,
E.V., Stanislavsky, E.S. (1987) Somatic antigens of Pseudomonas aeruginosa. The
structure of O- specific polysaccharide chains of the lipopolysaccharides from
P. aeruginosa II (Sandvik) and V (IM-1, Verder-Evans). Eur. J. Biochem., 166,
189-197.
63. Knirel, Y.A., Paramonov, N.A., Vinogradov, E.V., Shashkov, A.S., Dmitriev,
B.A., Kochetkov, N.K., Kholodkova, E.V., Stanislavsky, E.S. (1987) Somatic
antigens of Pseudomonas aeruginosa. The structure of O-specific polysaccharide
chains of lipopolysaccharides of P. aeruginosa O3 (Lanyi), O25 (Wokatsch) and
Fisher immunotypes 3 and 7. Eur. J. Biochem., 167, 549-561.
64. Knirel, Y.A., Kochetkov, N.K. (1987) 2,3-Diamino-2,3-dideoxyuronic
and 5,7-diamino-3,5,7,9- tetradeoxynonulosonic acids: new components of
bacterial polysaccharides (a review). FEMS Microbiol. Rev., 46, 381-384.
65. Knirel, Y.A., Vinogradov, E.V., Shashkov, A.S., Dmitriev, B.A., Kochetkov,
N.K., Stanislavsky, E.S., Mashilova, G.M. (1987) Somatic antigens of
Pseudomonas aeruginosa. The structure of the O-specific polysaccharide chain of
the lipopolysaccharide from P. aeruginosa O13 (Lanyi). Eur. J. Biochem., 163,
627-637.
66. Knirel, Y.A., Kocharova, N.A., Shashkov, A.S., Dmitriev, B.A., Kochetkov,
N.K., Stanislavsky, E.S., Mashilova, G.M. (1987) Somatic antigens of
Pseudomonas aeruginosa. The structure of the O-specific polysaccharide chains
of the lipopolysaccharide from P. aeruginosa O5 (Lanyi) and immunotype 6
(Fisher). Eur. J. Biochem., 163, 639-652.
67. Vinogradov, E.V., Knirel, Y.A., Shashkov, A.S., Kochetkov, N.K. (1987)
Determination of the degree of amidation of 2-deoxy-2-formamido-D-galacturonic
acid in O-specific polysaccharides of Pseudomonas aeruginosa O4 and related
strains. Carbohydr. Res., 170, C1-C4.
68. Capek, K., Capkova, J., Jary,J., Knirel, Y.A., Shashkov, A.S. (1987)
Preparation of methyl 2,4-diacetamido-2,4,6-trideoxy-α-D-ido-,
α-D-talo-, α-D-altro-, and α-D-mannopyranoside. Collection Czechoslovak Chem. Commun., 52,
2248-2259.
69. Kaca, W., Knirel, Y.A., Vinogradov, E.V., Kotelko, K. (1987) Structure of
the O-specific polysaccharide of Proteus mirabilis S 1959. Arch. Immunol. Ther.
Exp., 35, 431-437.
70. Knirel, Y.A., Kocharova, N.A., Vinogradov, E.V., Paramonov, N.A., Dmitriev,
B.A., Kochetkov, N.K., Stanislavsky, E.S., Kholodkova, E.V. (1987) Antigenic
polysaccharides of bacteria. 21. Structure of O-specific polysaccharide chains
and serological specificity of lipopolysaccharides of seven Pseudomonas
aeruginosa immunotypes. Bioorg. Khim., 12, 88-96 [In
Russian].
71. Vinogradov, E.V., Shashkov, A.S., Knirel, Y.A., Kochetkov, N.K.,
Kholodkova, E.V., Stanislavsky, E.S. (1987) Antigenic polysaccharides of
bacteria. 22. Structure of the O-specific polysaccharide chain of the
lipopolysaccharide of Proteus hauseri. Bioorg. Khim.,
13, 660-669 [In Russian].
72. Knirel, Y.A., Dashunin, V.M., Shashkov, A.S., Dmitriev, B.A., Kochetkov,
N.K., Hofman, I.L. (1987) The structure of the O-specific polysaccharide chain
of the Shigella dysenteriae type 7 lipopolysaccharide. Bioorg. Khim., 13, 1002-1005 [In Russian].
73. Vinogradov, E.V., Knirel, Y.A., Lipkind, G.M., Shashkov, A.S., Kochetkov,
N.K., Stanislavsky, E.S., Kholodkova, E.V. (1987) Antigenic polysaccharides of
bacteria. 23. The structure of the O-specific polysaccharide chain of the
lipopolysaccharide of Salmonella arizonae O59. Bioorg. Khim.,
13, 1275-1281 [In Russian].
74. Vinogradov, E.V., Knirel, Y.A., Lipkind, G.M., Shashkov, A.S., Kochetkov, N.K.,
Stanislavsky, E.S., Kholodkova, E.V. (1987) Antigenic polysaccharides of
bacteria. 24. The structure of the O-specific polysaccharide chain of the
Salmonella arizonae O63 (Arizona O8) lipopolysaccharide. Bioorg. Khim., 13, 1399-1404 [In Russian].
1988
75. Kocharova, N.A., Knirel, Y.A., Shashkov, A.S., Kochetkov, N.K., Pier, G.B.
(1988) Structure of an extracellular cross-reactive polysaccharide from
Pseudomonas aeruginosa immunotype 4. J. Biol. Chem., 263, 11291-11295.
76. Lipkind, G.M., Shashkov, A.S., Knirel, Y.A., Vinogradov, E.V., Kochetkov,
N.K. (1988) A computer-assisted structural analysis of regular polysaccharides on the basis of 13C-n.m.r. data. Carbohydr. Res., 175,
59-75.
77. Knirel, Y.A., Dashunin, V.M., Shashkov, A.S., Kochetkov, N.K., Dmitriev,
B.A., Hofman, I.L. (1988) Somatic antigens of Shigella: Structure of the
O-specific polysaccharide chain of the Shigella dysenteriae type 7
lipopolysaccharide. Carbohydr. Res., 179, 51-60.
78. Shashkov, A.S., Lipkind, G.M., Knirel, Y.A., Kochetkov, N.K.
(1988) Stereochemical factors determining the effects of glycosylation on the 13C
chemical shifts in carbohydrates. Magn. Reson. Chem., 26, 735-747.
79. Knirel, Y.A., Vinogradov, E.V., Kocharova, N.A., Paramonov, N.A.,
Kochetkov, N.K., Dmitriev, B.A., Stanislavsky, E.S., Lanyi, B. (1988) The
structure of O-specific polysaccharides and serological classification of
Pseudomonas aeruginosa (a review). Acta Microbiol. Hung., 35, 3-24.
80. Knirel, Y.A. (1988) New sialic acid-like sugars:
components of bacterial lipopolysaccharides. In Sialic acids, Proc.
Japanese-German Symp., Berlin, 1988, pp. 160-161.
81. Stanislavsky, E.S., Kholodkova, E.V., Knirel, Y.A., Kocharova, N.A. (1988)
Structure of the O-specific polysaccharides and protective activity of the lipopolysaccharides
of seven immunotypes (Fisher) of Pseudomonas aeruginosa. Zh. Mikrobiol.
Epidemil. Immunobiol., 3-7 [In Russian].
82. Stanislavsky, E.S., Lanyi, B., Knirel, Y.A., Dmitriev, B.A. (1988)
Chemotypes of Pseudomonas aeruginosa. Zh. Mikrobiol. Epidemil. Immunobiol., 10-14 [In Russian].
83. Knirel, Y.A., Tanatar, N.V., Soldatkina, M.A., Shashkov, A.S., Zakharova,
I.Y. (1988) Antigenic polysaccharides of bacteria. 25. Structure of the
O-specific polysaccharide chain of the Pseudomonas cepacia IMV
673/2 lipopolysaccharide, containing L-glycero-D-manno-heptose. Bioorg. Khim., 14, 77-81 [In Russian].
84. Knirel, Y.A., Zdorovenko, G.M., Shashkov, A.S., Mamyan, S.S., Yakovleva,
L.M., Solyanik, L.P., Zakharova, I.Y. (1988) Antigenic polysaccharides of bacteria.
26. Structure of the O-specific polysaccharide chains of lipopolysaccharides
from Pseudomonas cerasi 467 and Pseudomonas syringae pv.
syringae strains 218 and P-55, belonginig to
serogroups II and III. Bioorg. Khim., 14, 82-91 [In
Russian].
85. Knirel, Y.A., Zdorovenko, G.M., Shashkov, A.S., Gubanova, N.Y., Yakovleva,
L.M., Gvozdyak, R.I. (1988) Antigenic polysaccharides of bacteria. 27.
Structure of the O-specific polysaccharide chain of lipopolysaccharides from
Pseudomonas syringae pv. atrofaciens
2399, phaseolicola 120a and Pseudomonas holci 8299, belonginig to serogroup VI.
Bioorg. Khim., 14, 92-99 [In Russian].
86. Knirel, Y.A., Zdorovenko, G.M., Yakovleva, L.M., Shashkov, A.S., Solyanik,
L.P., Zakharova, I.Y. (1988) Antigenic polysaccharides of bacteria. 28.
Structure of O-specific chain of lipopolysaccharide of Pseudomonas syringae pv. atrofaciens K-1025 and
Pseudomonas holci 90a (serogroup II). Bioorg. Khim.,
14, 166-171 [In Russian].
87. Knirel, Y.A., Zdorovenko, G.M., Shashkov, A.S., Yakovleva, L.M., Gubanova,
N.Y., Gvozdyak, R.I. (1988) Antigenic polysaccharides of bacteria. 29.
Structure of the O-specific polysaccharide chain of the Pseudomonas holci 8300
(serogroup I) lipopolysaccharide. Bioorg. Khim., 14,
172-179 [In Russian].
88. Knirel, Y.A., Zdorovenko, G.M., Shashkov, A.S., Mamyan, S.S., Gubanova,
N.Y., Yakovleva, L.M., Solyanik, L.P. (1988) Antigenic polysaccharides of
bacteria. 30. Structure of the polysaccharide chain of the Pseudomonas syringae
pv. syringae 281 (serogroup
I) lipopolysaccharide. Bioorg. Khim., 14, 180-186 [In
Russian].
89. Knirel, Y.A., Zdorovenko, G.M., Veremeychenko, S.N., Lipkind, G.M.,
Shashkov, A.S., Zakharova, I.Y., Kochetkov, N.K. (1988) Antigenic
polysaccharides of bacteria. 31. Structure of the O-specific polysaccharide
chain of the Pseudomonas aurantiaca IMV 31 lipopolysaccharide. Bioorg. Khim., 14, 352-358 [In Russian].
90. Kocharova, N.A., Vinogradov, E.V., Knirel, Y.A., Shashkov, A.S., Kochetkov,
N.K., Stanislavsky, E.S., Kholodkova, E.V. (1988) The structure of the
O-specific polysaccharide chains of the lipopolysaccharides of Citrobacter O32
ans Salmonella arizonae O64. Bioorg. Khim., 14,
697-700 [In Russian].
91. Kocharova, N.A., Knirel, Y.A., Kochetkov, N.K., Stanislavsky, E.S. (1988)
Characterization of a rhamnan derived from preparations of Pseudomonas
aeruginosa lipopolysaccharides. Bioorg. Khim., 14,
701-703 [In Russian].
92. Vinogradov, E.V., Shashkov, A.S., Knirel, Y.A., Grigor'eva, N.A., Shubina,
L.N., Khokhlenko, A.F., Borina, L.E. (1988) Structure of extracellular
polysaccharide from Arthrobacter globiformis. Bioorg. Khim.,
14, 1040-1046 [In Russian].
93. Knirel, Y.A., Shashkov, A.S., Soldatkina, M.A., Paramonov, N.A., Zakharova,
I.Y. (1988) Antigenic polysaccharides of bacteria. 32. Structure of O-specific
polysaccharide chains of lipopolysaccharides from Pseudomonas cepacia serotypes
B and E containing D-fucose. Bioorg. Khim., 14,
1208-1213 [In Russian].
94. Vinogradov, E.V., Knirel, Y.A., Shashkov, A.S., Gorin, S.E., Vustina, T.F.,
Soyfer, V.S., Esipov, S.E., Lisak, L.V., Kochetkov, N.K. (1988) Structure of
the extracellular polysaccharide from Rhodococcus sp. containing
D-lyxo-hexulosonic acid. Bioorg. Khim., 14, 1214-1223
[In Russian].
95. Vinogradov, E.V., Pietrasik, D., Shashkov, A.S., Knirel, Y.A., Kochetkov,
N.K. (1988) Structure of the Proteus mirabilis O27 O-specific polysaccharide,
containing amino acids and phosphoethanolamine. Bioorg. Khim.,
14, 1282-1286 [In Russian].
96. Knirel, Y.A., Shashkov, A.S., Soldatkina, M.A., Zakharova, I.Y. (1988)
Antigenic polysaccharides of bacteria. 33. Structure of the O-specific
polysaccharide chain of lipopolysaccharide from Pseudomonas cepacia serotype 6.
Bioorg. Khim., 14, 1413-1418 [In Russian].
97. Knirel, Y.A., Mamontova, V.A., Kocharova, N.A., Shashkov, A.S., Solov'eva,
T.F., Kochetkov, N.K. (1988) Structure of the capsular polysaccharide of
Klebsiella ozaenae K4 containing a 3-deoxynonulosonic acid. Bioorg. Khim., 14, 1583-1585 [In Russian].
98. Knirel, Y.A., Soldatkina, M.A., Shashkov, A.S., Tanatar, N.V., Paramonov,
N.A., Zakharova, I.Y. (1988) Antigenic polysaccharides of bacteria. 34.
Structure of O- specific polysaccharide chains of lipopolysaccharides from
Pseudomonas cepacia strains IMV 4207 (serotype A) and IMV 598/2. Bioorg. Khim., 14, 1678-1683 [In Russian].
99. Knirel, Y.A., Tanatar, N.V., Soldatkina, M.A., Zakharova, I.Y. (1988)
Antigenic polysaccharides of bacteria. 35. Structural determination of
polysaccharide chains of Pseudomonas cepacia IMV 4176 and IMV 4202 (serotype 3)
lipopolysaccharides. Bioorg. Khim., 14, 1684-1689 [In
Russian].
1989
100. Kocharova, N.A., Hatano, K., Shashkov, A.S., Knirel, Y.A., Kochetkov,
N.K., Pier, G.B. (1989) The structure and serologic
distribution of an extracellular neutral polysaccharide from Pseudomonas
aeruginosa immunotype 3. J.
Biol. Chem., 264, 15569-15573.
101. Vinogradov, E.V., Kaca, W., Knirel, Y.A.,
Rozalski, A., Kochetkov, N.K. (1989) Structural studies on the
fucosamine-containing O-specific polysaccharide of Proteus vulgaris O19. Eur.
J. Biochem., 180, 95-99.
102. Vinogradov, E.V., Krajewska-Pietrasik, D., Kaca, W., Shashkov, A.S.,
Knirel, Y.A., Kochetkov, N.K. (1989) Structure of Proteus mirabilis O27
O-specific polysaccharide containing amino acids and phosphoethanolamine. Eur.
J. Biochem., 185, 645-650.
103. Stanislavsky, E.S., Kholodkova, E.V., Knirel, Y.A., Kocharova, N.A. (1989)
Saccharides of seven Pseudomonas aeruginosa immunotypes. FEMS Microbiol. Immunol., 47, 245-252.
104. Knirel, Y.A., Vinogradov, E.V., Mort, A.J. (1989) Application of anhydrous
hydrogen fluoride for the structural analysis of polysaccharides (a review).
Adv. Carbohydr. Chem. Biochem., 47, 167-202.
105. Knirel, Y.A., Kocharova, N.A., Shashkov, A.S., Kochetkov, N.K., Mamontova,
V.A., Solov'eva, T.F. (1989) Structure of the capsular polysaccharide of
Klebsiella ozaenae serotype K4 containing
3-deoxy-D-glycero-D-galacto-nonulosonic acid. Carbohydr. Res., 188, 145-155.
106. Kochetkov, N.K., Knirel, Y.A. (1989) The
structures of O-specific polysaccharides of bacterium Pseudomonas aeruginosa (a
review). Sov. Sci. Rev. B. Chem., 13, Part 1, 1-101.
107. Kochetkov, N.K., Shashkov, A.S., Lipkind, G.M., Knirel, Y.A. (1989) New 13C-NMR
approaches to the structural analysis of carbohydrates (a review). Sov. Sci. Rev. B. Chem., 13,
Part II, 1-73.
108. Nazarenko, E.L., Gorshkova, R.P., Ovodov, Y.S.,
Shashkov, A.S., Knirel, Y.A. (1989) Structure of the repeating unit of the
O-specific polysaccharide chain of Vibrio fluvialis lipopolysaccharide. Bioorg.
Khim., 15, 1100-1106 [In Russian].
109. Vinogradov, E.V., Kaca, W., Shashkov, A.S., Pietrasik, D., Rozalski, A.,
Knirel, Y.A., Kochetkov, N.K. (1989) Structure of O-specific polysaccharide of
Proteus mirabilis O3 containing N-(2-hydroxyethyl)-D-alanine. Bioorg. Khim., 15, 1431-1434 [In Russian].
110. Knirel, Y.A., Zdorovenko, G.M., Veremeychenko, S.N., Shashkov, A.S.,
Zakharova, I.Y., Kochetkov, N.K. (1989) Antigenic polysaccharides of bacteria.
36. Structural study of O-specific polysaccharide chain of lipopolysaccharide
of Pseudomonas fluorescens IMV 2763 (biovar G). Bioorg. Khim.,
15, 1538-1545 [In Russian].
111. Soldatkina, M.A., Knirel, Y.A., Tanatar, N.V., Zakharova, I.Y. (1989)
Immunological and structural studies of Pseudomonas cepacia lipopolysaccharide
(a review). Mikrobiol. Zh., 51, 32-38 [In Russian].
1990
112. Knirel, Y.A. (1990) Polysaccharide antigens of Pseudomonas aeruginosa (a
review). CRC Crit. Rev. Microbiol., 17, 273-304.
113. Vinogradov, E.V., Kaca,W., Shashkov, A.S.,
Krajewska-Pietrasik, D., Rozalski,A., Knirel, Y.A., Kochetkov, N.K. (1990) The
structure of Proteus mirabilis O3 O-specific polysaccharide containing
N-(2-hydroxyethyl)-D-alanine. Eur. J. Biochem., 188, 645-651.
114. Katzenellenbogen, E., Romanowska, E., Kocharova, N.A., Shashkov, A.S.,
Lipkind, G.M., Knirel, Y.A., Kochetkov, N.K. (1990) The
structure of the biological repeating unit of the O-antigen of Hafnia alvei
O39. Carbohydr. Res., 203, 219-227.
115. Zdorovenko, G.M., Veremeychenko, S.N., Yakovleva, L.M., Knirel, Y.A.
(1990) Endotoxins of Pseudomonas fluorescens. Adv. Exp. Med. Biol., 256, 131-135.
116. Vinogradov, E.V., Kaca, W., Knirel, Y.A.,
Rozalski, A., Kotelko, K., Kochetkov, N.K. (1990) The
structure of O-specific polysaccharide of Proteus vulgaris O19
lipopolysaccharide. Adv. Exp. Med. Biol., 256, 127-130.
117. Shashkov, A.S., Zdorovenko, G.M., Daeva, E.D., Yakovleva, L.M., Solyanik,
L.P., Gvozdyak, R.I., Knirel, Y.A., Kochetkov, N.K. (1990) Antigenic
polysaccharides of bacteria. 37. Structure of polysaccharide chain of
lipopolysaccharide of Pseudomonas syringae pv. tabaci (serogroup VII). Bioorg. Khim.,
16, 90-97 [In Russian].
118. Vorob'eva, A.I., Vitovskaya, G.A., Shashkov, A.S., Knirel, Y.A.,
Paramonov, N.A. (1990) Structure of glucogalactan from kefir grains. Bioorg. Khim., 16, 808-815 [In Russian].
119. Nazarenko, E.L., Shashkov, A.S., Knirel, Y.A., Ivanova, E.P., Ovodov, Y.S.
(1990) Unusual acidic monosaccharides as components of the O-specific
polysaccharides of Vibrio. Bioorg. Khim., 16,
1426-1429 [In Russian].
120. Makarenko, T.A., Kocharova, N.A., Tsvetkov, Y.E., Edvabnaya, L.S., Knirel,
Y.A., Backinowsky, L.V., Kholodkova, E.V., Stanislavsky, E.S., Kochetkov, N.K.
(1990) Immune response to conjugate of a synthetic polysaccharide with protein.
Bull. Eksp. Biol. Med., 293-294 [In Russian].
121. Varbanets, L.D., Kocharova, N.A., Knirel, Y.A., Muras, V.A., Moskalenko,
N.V., Brovarskaya, O.S. (1990) Lipopolysaccharides of Pseudomonas solanacearum
and Pseudomonas cichorii. Mikrobiol. Zh., 52, 27-33
[In Russian].
1991
122. Vinogradov, E.V., Sidorczyk, Z., Swierzko, A., Rozalski, A., Daeva, E.D.,
Shashkov, A.S., Knirel, Y.A., Kochetkov, N.K. (1991) The structure of the
O-specific polysaccharide chain of Proteus penneri strain 16
lipopolysaccharide. Eur. J. Biochem., 197, 93-103.
123. Vinogradov, E.V., Kaca, W., Rozalski, A., Shashkov, A.S., Cedzynski, M.,
Knirel, Y.A., Kochetkov, N.K. (1991) Structural and immunochemical studies of
O-specific polysaccharide of Proteus vulgaris 5/43 belonging to OX19 group
(O-variants). Eur. J. Biochem., 200, 195-201.
124. Kocharova, N.A., Knirel, Y.A., Romanowska, A., Romanowska, E., Makarenko,
T.A., Edvabnaya, L.S., Stanislavsky, E.S., Zdorovenko, G.M., Yakovleva, L.M.
(1991) Detection of common polysaccharide antigen of Pseudomonas aeruginosa
with O-antiserum to Pseudomonas cerasi. FEMS Microbiol. Immunol.,
76, 69-74.
125. Vinogradov, E.V., Shashkov, A.S., Knirel, Y.A., Zdorovenko, G.M.,
Solyanic, L.P., Gvozdyak, R.I. (1991) Somatic antigens of pseudomonads:
structure of the O-specific polysaccharide chain of Pseudomonas syringae pv. syringae (cerasi) 435 lipopolysaccharide. Carbohydr. Res.,
212, 295-299.
126. Shashkov, A.S., Vinogradov, E.V., Daeva, E.D., Knirel, Y.A., Zdorovenko,
G.M., Gubanova, N.Y., Yakovleva, L.M., Zakharova, I.Y. (1991) Somatic antigens of
pseudomonads: structure of the O-specific polysaccharide chain of Pseudomonas
syringae pv. lachrymans 7591 (serogroup IX)
lipopolysaccharide. Carbohydr. Res., 212, 301-305.
127. Vinogradov, E.V., Shashkov, A.S., Knirel, Y.A., Zdorovenko, G.M.,
Solyanic, L.P., Gubanova, N.Y., Yakovleva, L.M. (1991) Somatic antigens of
pseudomonads: structure of the O-specific polysaccharide chain of Pseudomonas
syringae pv. tabaci 225 (serogroup VIII)
lipopolysaccharide. Carbohydr. Res., 212, 307-311.
128. Vinogradov, E.V., Daeva, E.D., Shashkov, A.S., Knirel, Y.A., Zdorovenko,
G.M., Yakovleva, L.M., Gubanova, N.Y., Solyanik, L.P. (1991) Somatic antigens
of pseudomonads: structure of the O-specific polysaccharide chain of
Pseudomonas gladioli pv. alliicola 8494 (serogroup X)
lipopolysaccharide. Carbohydr. Res., 212, 313-320.
129. Vinogradov, E.V., Shashkov, A.S., Knirel, Y.A., Kochetkov, N.K.,
Tochtamysheva, N.V., Averin, S.P., Goncharova, O.V., Khlebnikov, V.S. (1991)
Structure of the O-antigen of Francisella tularensis strain 15. Carbohydr.
Res., 214, 289-297.
130. Grimmecke, H.D., Mamat, U., Voges, M., Lauk, W., Shashkov, A.S., Knirel,
Y.A. (1991) Structure of the extracellular polysaccharide of Acetobacter
methanolicus MB 58/4 (IMET 10945). Carbohydr. Res., 218, 247-251.
131. Vinogradov, E.V., Shashkov, A.S., Knirel, Y.A., Kochetkov, N.K.,
Sidorczyk, Z., Swierzko, A. (1991) The structure of
the Proteus penneri strain 14 O-specific polysaccharide containing D- and
L-alanine. Carbohydr. Res., 219, C1-C3.
132. Grimmecke, H.D., Mamat, U., Lauk, W., Shashkov, A.S., Knirel, Y.A.,
Vinogradov, E.V., Kochetkov, N.K. (1991) Structure of the capsular
polysaccharide and the O-side chain of the lipopolysaccharide from Acetobacter
methanolicus MB 58/4 (IMET 10945), and of oligosaccharides resulting from their
degradation by the bacteriophage Acm1. Carbohydr. Res., 220, 165-172.
133. Zdorovenko, G.M., Gubanova, N.Y., Solyanik, L.P., Knirel, Y.A., Yakovleva,
L.M., Zakarova, I.Y. (1991) Composition and structure of lipopolysaccharides
from the strains of different pathovars of Pseudomonas syringae (a review). In
Pseudomonas syringae pathovars, Proc. 4th Intern. Working Group, Florence,
1991, pp. 391-401.
134. Kocharova, N.A., Varbanets, L.D., Shashkov, A.S., Muras, V.A., Knirel,
Y.A. (1991) Structure of an extracellular polysaccharide of Corynebacterium
sepedonicum possessing phytotoxic activity. Bioorg. Khim.,
17, 107-110 [In Russian].
135. Paramonov, N.A., Knirel, Y.A., Kochetkov, N.K. (1991) Synthesis and
properties of methyl 3-acetamidino-3,6-dideoxy-α-L-glucopyranoside.
Bioorg. Khim., 17, 1111-1115 [In Russian].
136. Antonov, Y.V., Popovtseva, L.D., Yarulin, R.G., Il'yukhin, V.I., Lozovaya,
N.A., Farber, S.M., Knirel, Y.A., Varbanets, L.D. (1991) Problems of resistance
of the causative agent of melioidosis to antibiotics. Antibiot. Khimioter., 36, 26-28 [In Russian].
1992
137. Rosner, H., Grimmecke, H.D., Knirel, Y.A., Shashkov, A.S. (1992)
Hyaluronic acid and a (1-->4)-β-xylan, extracellular
polysaccharides of Pasteurella multocida (Carter type A) strain 880. Carbohydr.
Res., 223, 329-333.
138. Kocharova, N.A., Knirel, Y.A., Shashkov, A.S., Kochetkov, N.K., Varbanets,
L.D. (1992) The structure of O-specific polysaccharide
from Pseudomonas solanacearum ICMP 4157. Carbohydr. Res., 228, 315-320.
139. Vinogradov, E.V., Shashkov, A.S., Knirel, Y.A., Kochetkov, N.K.,
Dabrowski, J., Grosskurth, H., Stanislavsky, E.S., Kholodkova, E.V. (1992) The
structure of the O-specific polysaccharide chain of the lipopolysaccharide of
Salmonella arizonae O61. Carbohydr. Res., 231, 1-11.
140. Katzenellenbogen, E., Romanowska, E., Kocharova, N.A., Knirel, Y.A.,
Shashkov, A.S., Kochetkov, N.K. (1992) The structure
of a glycerol teichoic acid-like O-specific polysaccharide of Hafnia alvei
1205. Carbohydr. Res., 231, 249-260.
141. Knirel, Y.A., Paramonov, N.A., Shashkov, A.S., Kochetkov, N.K., Yarullin,
R.G., Farber, S.M., Efremenko, V.I. (1992) Structure of the polysaccharide
chains of Pseudomonas pseudomallei lipopolysaccharides. Carbohydr. Res., 233,
185-193.
142. Knirel, Y.A., Paramonov, N.A., Vinogradov, E.V., Shashkov, A.S.,
Kochetkov, N.K., Sidorczyk, Z., Swierzko, A. (1992) Structure of the O-specific
polysaccharide chain of Proteus penneri 62 containing
2-acetamido-3-O-[(S)-1-carboxyethyl]-2-deoxy-D-glucose (N-acetylisomuramic
acid). Carbohydr. Res., 235, C19-C23.
143. Seltmann, G., Knirel, Y.A., Shashkov, A.S., Tschape, H. (1992)
Characterization of a lipopolysaccharide encoded by a recombinant Shigella
sonnei plasmid in Escherichia coli K-12. Zbl. Bakt.,
277, 419-428.
144. Knirel, Y.A., Vinogradov, E.V., Shashkov, A.S., Sidorczyk, Z., Kaca, W.,
Rozalski, A., Kotelko, K., Kochetkov, N.K. (1992) The structures of the
O-specific polysaccharides of Proteus. Dokl. Akad. Nauk.,
324, 333-338 [In Russian].
145. Kochetkov, N.K., Vinogradov, E.V., Knirel, Y.A., Shashkov, A.S., Lipkind,
G.M. (1992) A program SCAN for 13C-NMR-based structural analysis of
linear polysaccharides with using the personal computer. Bioorg. Khim., 18, 116-125 [In Russian].
1993
146. Makarenko, T.A., Kocharova, N.A., Edvabnaya, L.S., Tsvetkov, Y.E.,
Kholodkova, E.V., Knirel, Y.A., Backinowsky, L.V., Kochetkov, N.K.,
Stanislavsky, E.S. (1993) Immunological studies of an artificial antigen with
specificity of a common polysaccharide antigen of Pseudomonas aeruginosa. FEMS
Immunol. Med. Microbiol., 7, 251-256.
147. Knirel, Y.A., Vinogradov, E.V., Shashkov, A.S., Sidorczyk, Z., Rozalski,
A., Radziejewska-Lebrecht, I., Kaca, W. (1993) Structural study of O-specific
polysaccharides of Proteus (a review). J. Carbohydr. Chem., 12, 379-414.
148. Shashkov, A.S., Vinogradov, E.V., Knirel, Y.A., Nifant'ev, N.E.,
Kochetkov, N.K., Dabrowski, J., Kholodkova, E.V., Stanislavsky, E.S. (1993)
Structure of the O-specific polysaccharide of Salmonella arizonae O45. Carbohydr.
Res., 241, 177-188.
149. Bukharov, A.V., Skvortsov, I.M., Ignatov, V.V., Shashkov, A.S., Knirel,
Y.A., Dabrowski, J. (1993) Structure of the O-specific polysaccharide of
Xanthomonas campestris NCPPB 45 lipopolysaccharide. Carbohydr. Res., 241, 309-316.
150. Vinogradov, E.V., Paramonov, N.A., Knirel, Y.A., Shashkov, A.S.,
Kochetkov, N.K. (1993) Structural study of a new sialic acid-containing
O-specific polysaccharide of Salmonella arizonae O21; formation of anhydro
derivatives of neuraminic acid upon treatment with anhydrous hydrogen fluoride.
Carbohydr. Res., 242, C11-C14.
151. Knirel, Y.A., Shashkov, A.S., Paramonov, N.A., Zdorovenko, G.M., Solyanik,
L.P., Yakovleva, L.M. (1993) Somatic antigens of pseudomonads: structure of the
O-specific polysaccharide of Pseudomonas syringae pv. tomato
140(R). Carbohydr. Res., 243, 199-204.
152. Knirel, Y.A., Paramonov, N.A., Shashkov, A.S., Kochetkov, N.K.,
Zdorovenko, G.M., Veremeychenko, S.N., Zakharova, I.Y. (1993) Somatic antigens
of pseudomonads: structure of the O-specific polysaccharide of Pseudomonas
fluorescens biovar A strain IMV 1152. Carbohydr. Res.,
243, 205-210.
153. Kocharova, N.A., Knirel, Y.A., Shashkov, A.S., Nifant'ev, N.E., Kochetkov,
N.K., Varbanets, L.D., Moskalenko, N.V., Brovarskaya, O.S., Muras, V.A., Young,
J.M. (1993) Studies of O-specific polysaccharide chains of Pseudomonas
solanacearum lipopolysaccharides consisting of structurally different repeating
units. Carbohydr. Res., 250, 275-287.
154. Knirel, Y.A., Kochetkov, N.K. (1993) The
structure of lipopolysaccharides of Gram-negative bacteria. I. General
characterization of the lipopolysaccharides and the structure of lipid A (a
review). Biokhimiya, 58, 166-181 [In Russian; English translation: pp. 73-84].
155. Knirel, Y.A., Kochetkov, N.K. (1993) The
structure of lipopolysaccharides of Gram-negative bacteria. II. The structure
of the core region (a review). Biokhimiya, 58, 182-201 [In Russian; English
translation: pp. 84-99].
156. Gorshkova, R.P., Nazarenko, E.L., Zubkov, V.A., Ivanova, E.P., Ovodov,
Y.S., Shashkov, A.S., Knirel, Y.A. (1993) Structure of the repeating unit of
the acidic polysaccharide of Alteromonas haloplanktis KMM 156. Bioorg. Khim., 19, 327-336 [In Russian].
157. Nazarenko, E.L., Zubkov, V.A., Shashkov, A.S., Knirel, Y.A., Gorshkova,
R.P., Ivanova, E.P., Ovodov, Y.S. (1993) The structure of the repeating unit of
the acidic polysaccharide of Alteromonas macleodii 2MM6. Bioorg. Khim., 19, 740-751 [In Russian].
158. Nazarenko, E.L., Zubkov, V.A., Shashkov, A.S., Knirel, Y.A., Komandrova,
N.A., Gorshkova, R.P., Ovodov, Y.S. (1993) Structure of the repeating unit of
the O-specific polysaccharide from Vibrio fluvialis. Bioorg. Khim.,
19, 989-1000 [In Russian].
159. Shashkov, A.S., Kocharova, N.A., Knirel, Y.A., Varbanets, L.D.,
Moskalenko, N.V., Zdokhlii, A.V. (1993) Antigenic polysaccharides of bacteria.
38. Structure of the O- antigens of Pseudomonas solanacearum ICMP 7942 and ICMP
8169. Bioorg. Khim., 19, 1089-1094 [In Russian].
160. Vinogradov, E.V., Knirel, Y.A., Kochetkov, N.K., Radziejewska-Lebrecht,
J., Kaca, W. (1993) Structural study of the O-specific polysaccharides of
Proteus mirabilis O28 and 3/6 containing amides of D-galacturonic acid with
L-amino acids; C-methylation and β-elimination in L-serine and
L-threonine in methylation analysis. Bioorg. Khim.,
19, 1132-1136 [In Russian].
161. Sidorczyk, Z., Swierzko, A., Lipinska, M., Vinogradov, E.V., Shashkov,
A.S., Knirel, Y.A. (1993) Immunochemical studies of O-specific polysaccharide
of lipopolysaccharide of Proteus penneri 14. Med. Dosw. Mikrobiol.,
45, 85-87 [In Polish].
162. Sidorczyk, Z., Swierzko, A., Zych, K., Shashkov, A.S., Vinogradov, E.V.,
Knirel, Y.A. (1993) Immunochemical studies of O-specific polysaccharide of
lipopolysaccharide of Proteus penneri 42. Med. Dosw. Mikrobiol.,
45, 89-92 [In Polish].
163. Cedzynski, M., Rozalski, A., Kotelko, K., Kaca, W., Vinogradov, E.V.,
Knirel, Y.A., Kochetkov, N.K. (1993) Structural and immunological studies of
Proteus mirabilis O33 O-specific polysaccharide. Med. Dosw. Mikrobiol.,
45, 93-97 [In Polish].
1994
164. Kocharova, N.A., Thomas-Oates, J.E., Knirel, Y.A., Shashkov, A.S.,
Dabrowski, U., Kochetkov, N.K., Stanislavsky, E.S., Kholodkova, E.V. (1994) The structure of the O-specific polysaccharide of
Citrobacter O16 containing glycerol phosphate. Eur. J. Biochem., 219, 653-661.
165. Knirel, Y.A., Rietschel, E.T., Marre, R., Zähringer, U. (1994) The structure of the O-specific chain of Legionella
pneumophila serogroup 1 lipopolysaccharide. Eur. J. Biochem., 221, 239-245.
166. Grimmecke, H.D., Mamat, U., Kuhn, I., Shashkov, A.S., Knirel, Y.A. (1994)
Structure of the capsular polysaccharide and the O-side chain of the
lipopolysaccharide from Acetobacter methanolicus MB 58 (IMET B346). Carbohydr.
Res., 252, 309-316.
167. Vinogradov, E.V., Knirel, Y.A., Kochetkov, N.K., Schlecht, S., Mayer, H.
(1994) The structure of the O-specific polysaccharide
of Salmonella arizonae O62. Carbohydr. Res., 253, 101-110.
168. Grimmecke, H.D., Knirel, Y.A., Shashkov, A.S., Kiesel, B., Lauk, W.,
Voges, M. (1994) Structure of the capsular polysaccharide and the O-side-chain
of the lipopolysaccharide from Acetobacter methanolicus MB 70, and of
oligosaccharides resulting from their degradation by the bacteriophage Acm6.
Carbohydr. Res., 253, 277-282.
169. Grimmecke, H.D., Voges, M., Knirel, Y.A., Shashkov, A.S., Lauk, W.,
Kiesel, B. (1994) Structure of the capsular polysaccharide and the O-side-chain
of the lipopolysaccharide from Acetobacter methanolicus MB 135 (IMET 11402).
Carbohydr. Res., 253, 283-286.
170. Vinogradov, E.V., Knirel, Y.A., Thomas-Oates, J.E., Shashkov, A.S., L'vov,
V.L. (1994) The structure of the cyclic
enterobacterial common antigen (ECA) from Yersinia pestis. Carbohydr. Res.,
258, 223-232.
171. Grimmecke, H.D., Knirel, Y.A., Kiesel, B., Voges, M., Rietschel, E.T.
(1994) Structure of the Acetobacter methanolicus MB 129 capsular
polysaccharide, and of oligosaccharides resulting from degradation by
bacteriophage Acm7. Carbohydr. Res., 259, 45-58.
172. Vinogradov, E.V., Knirel, Y.A., Shashkov, A.S., Paramonov, N.A.,
Kochetkov, N.K., Stanislavsky, E.S., Kholodkova, E.V. (1994) The structure of
the O-specific polysaccharide of Salmonella arizonae O21 (Arizona 22)
containing N-acetylneuraminic acid. Carbohydr. Res., 259, 59-65.
173. Katzenellenbogen, E., Romanowska, E., Shashkov, A.S., Kocharova, N.A.,
Knirel, Y.A., Kochetkov, N.K. (1994) The structure of
the O-specific polysaccharide of Hafnia alvei strain 1216. Carbohydr. Res.,
259, 67-76.
174. Knirel, Y.A., Veremeychenko, S.N., Zdorovenko, G.M., Shashkov, A.S.,
Paramonov, N.A., Zakharova, I.Y., Kochetkov, N.K. (1994) Somatic antigens of
pseudomonads: structure of the O-specific polysaccharide of Pseudomonas
fluorescens biovar A strain IMV 472. Carbohydr. Res.,
259, 147-151.
175. Kocharova, N.A., Shashkov, A.S., Knirel, Y.A., Varbanets, L.D.,
Moskalenko, N.V. (1994) Structure of the O-specific polysaccharide of
Pseudomonas solanacearum strain 8089. Carbohydr. Res., 259, 153-157.
176. Knirel, Y.A., Paramonov, N.A., Vinogradov, E.V., Kochetkov, N.K.,
Sidorczyk, Z., Zych, K. (1994)
2-Acetamido-4-O-[(S)-1-carboxyethyl]-2-deoxy-D-glucose, a new natural isomer of
N-acetylmuramic acid from the O-specific polysaccharide of Proteus penneri 35.
Carbohydr. Res., 259, C1-C3.
177. Kocharova, N.A., Knirel, Y.A., Shashkov, A.S., Kochetkov, N.K.,
Kholodkova, E.V., Stanislavsky, E.S. (1994) The structure of the Citrobacter
freundii O8a,8b O-specific polysaccharide containing
D-xylofuranose. Carbohydr. Res., 263, 327-331.
178. Kocharova, N.A., Knirel, Y.A., Shashkov, A.S., Kochetkov, N.K.,
Kholodkova, E.V., Stanislavsky, E.S. (1994) The structure of the O-specific
polysaccharide of Citrobacter freundii O32, a partially O-acetylated
homopolymer of 3,6-dideoxy-3-(L-glyceroylamino)-α-D-galactopyranose. Carbohydr. Res.,
264, 123-128.
179. Knirel, Y.A., Kochetkov, N.K. (1994) The
structure of lipopolysaccharides of Gram-negative bacteria. III. The structure
of O-antigens (a review). Biokhimiya, 59, 1784-1851 [In Russian; English
translation: Biochemistry (Moscow), 59, 1325-1383].
180. Sidorczyk, Z., Swierzko, A., Vinogradov, E.V., Knirel, Y.A., Shashkov,
A.S. (1994) Structural and immunochemical studies of the O-specific
polysaccharide of Proteus penneri strain 14. Arch. Immunol. Ther. Exp., 42,
209-215.
181. Amano, K., Kyohno, K., Knirel, Y.A., Kaca, W. (1994) Chemical and
serological comparison of lipopolysaccharides from Proteus species related to
Weil-Felix antigens. Japan. J. Med. Sci. Biol., 47, 308-309; Proc. 41st Symp. on Toxins, Tokyo, July 19-21, 1994.
182. El'kin, Y.N., Knirel, Y.A., Kocharova, N.A., Vinogradov, E.V., Capek, K.
(1994) Mass spectra of methyl pyranosides of N-acetylmonoamino and
N-acetyldiamino sugar acetates. Bioorg. Khim., 20,
790-797 [In Russian].
183. Paramonov, N.A., Shashkov, A.S., Knirel, Y.A., Soldatkina, M.A.,
Zakharova, I.Y. (1994) Antigenic polysaccharides of bacteria. 39. Structure of
the O-specific polysaccharides of Pseudomonas cepacia serogroups C, I, O1, and O4. Bioorg. Khim., 20,
984-993 [In Russian].
1995
184. Likhosherstov, L.M., Senchenkova, S.N., Knirel, Y.A., Shashkov, A.S.,
Shibaev, V.N., Stepnaya, O.A., Kulaev, I.M. (1995) Structure of an acidic
polysaccharide present in the bacteriolytic complex lysoamidase. FEBS Lett., 368, 113-116.
185. Radziejewska-Lebrecht, J., Shashkov, A.S., Grosskurth, H., Bartodziejska,
B., Knirel, Y.A., Vinogradov, E.V., Rozalski, A., Kaca, W., Kononov, L.O.,
Chernyak, A.Y., Mayer, H., Kochetkov, N.K. (1995) Structure and epitope
characteristic of O-specific polysaccharide of Proteus mirabilis O28 containing
amides of D-galacturonic acid with L-serine and L-lysine. Eur. J. Biochem.,
230, 705-712.
186. Sidorczyk, Z., Swierzko, A., Knirel, Y.A., Vinogradov, E.V., Chernyak,
A.Y., Kononov, L.O., Cedzynski, M., Rozalski, A., Kaca, W., Shashkov, A.S.,
Kochetkov, N.K. (1995) Structure and epitope specificity of the O-specific
polysaccharide of Proteus penneri strain 12 (ATCC 33519) containing the amide
of D-galacturonic acid with L-threonine. Eur. J. Biochem., 230, 713-721.
187. Knirel, Y.A., Paredes, L., Jansson, P.-E., Weintraub, A., Widmalm, G.,
Albert, M.J. (1995) Structure of the capsular polysaccharide of Vibrio cholerae
O139 synonym Bengal containing D-galactose-4,6-cyclophosphate. Eur. J.
Biochem., 232, 391-396.
188. Senchenkova, S.N., Shashkov, A.S., Moran, A.P., Helander, I., Knirel, Y.A. (1995) Structures of the O-specific polysaccharide
chains of Pectinatus cerevisiiphilus and Pectinatus frisingensis
lipopolysaccharides. Eur. J. Biochem., 232, 552-557.
189. Cedzynski, M., Knirel, Y.A., Rozalski, A., Shashkov, A.S., Vinogradov,
E.V., Kaca, W. (1995) The structure and serological
specificity of Proteus mirabilis O43 O-antigen. Eur. J. Biochem., 232, 558-562.
190. Helbig, J.H., Luck, P.C., Knirel, Y.A., Zähringer, U. (1995) Molecular
characterization of the virulence-associated lipopolysaccharide epitope of
Legionella pneumophila serogroup 1 strains. Epidemiol. Infect.,
115, 71-78.
191. Senchenkova, S.N., Knirel, Y.A., Likhosherstov, L.M., Shashkov, A.S.,
Shibaev, V.N., Starukhina, L.A., Deryabin, V.V. (1995) Structure of simusan, a
new acidic exopolysaccharide from Arthrobacter sp. Carbohydr. Res., 266,
103-113.
192. Katzenellenbogen, E., Romanowska, E., Kocharova, N.A., Shashkov, A.S.,
Knirel, Y.A., Kochetkov, N.K. (1995) Structure of the O-specific polysaccharide
of Hafnia alvei 1204 containing 3,6-dideoxy-3-formamido-D-glucose. Carbohydr.
Res., 273, 187-195.
193. Zubkov, V.A., Nazarenko, E.L., Gorshkova, R.P., Ivanova, E.P., Shashkov,
A.S., Knirel, Y.A., Paramonov, N.A., Ovodov, Y.S. (1995) Structure of the
capsular polysaccharide from Alteromonas sp. CMM 155. Carbohydr. Res., 275,
147-154.
194. Knirel, Y.A., Shashkov, A.S., Vinogradov, E.V., Kochetkov, N.K., Swierzko,
A., Sidorczyk, Z. (1995) The structure of the O-specific polysaccharide chain
of Proteus penneri strain 42 lipopolysaccharide. Carbohydr. Res., 275, 201-206.
195. L'vov, V.L., Shashkov, A.S., Knirel, Y.A., Arifulina, A.E., Senchenkova,
S.N., Yakovlev, A.V., Dmitriev, B.A. (1995) Structure of the O-specific
polysaccharide chain of Shigella boydii type 5 lipopolysaccharide: A repeated
study. Carbohydr. Res., 279, 183-192.
196. Knirel, Y.A., Grosskurth, H., Helbig, J.H., Zähringer, U. (1995)
Structures of decasaccharide and tridecasaccharide tetraphosphates isolated by
strong alkaline degradation of O- deacylated lipopolysaccharide of Pseudomonas
fluorescens strain ATCC 49271. Carbohydr. Res., 279, 215-226.
197. Kocharova, N.A., Knirel, Y.A., Kholodkova, E.V., Stanislavsky, E.S. (1995)
Structure of the O-specific polysaccharide chain of Citrobacter freundii O28,1c lipopolysaccharide. Carbohydr. Res., 279, 327-330.
198. Zähringer, U., Knirel, Y.A., Lindner, B., Helbig, J.H., Sonesson, A.,
Marre, R., Rietschel, E.T. (1995) The
lipopolysaccharide of Legionella pneumophila serogroup 1 (strain Philadelphia
1): chemical structure and biological significance. Prog. Clin. Biol. Res.,
392, 113-139; Bacterial endotoxins: Lipopolysaccharides from genes to therapy,
Proc. 3rd Conf. of the International Endotoxin Society, Helsinki, August 15-18,
1994 (Levin,J., Alving,C.R., Munford,R.S., Redl,H.,
eds.) Wiley-Liss, New York.
199. Likhosherstov, L.M., Senchenkova, S.N., Knirel, Y.A., Shashkov, A.S.,
Shibaev, V.N., Stepnaya, O.A., Kulaev, I.S. (1995) Structure of an acidic
polysaccharide from the lysoamidase bacteriolytic complex. Biokhimiya, 60,
827-836 [In Russian; English translation: Biochemistry (Moscow), 60, 617-624].
200. Knirel, Y.A., Kocharova, N.A. (1995) Structure and properties of the
common polysaccharide antigen of Pseudomonas aeruginosa (a review). Biokhimiya,
60, 1964-1976 [In Russian; English translation: Biochemistry (Moscow), 60,
1499-1507].
1996
201. Ovod, V., Rudolph, K., Knirel, Y.A., Krohn, K. (1996) Immunochemical
characterization of O polysaccharides composing the α-D-rhamnose
backbone of lipopolysaccharide of Pseudomonas syringae and classification of
bacteria into serogroups O1 and O2 with monoclonal antibodies. J. Bacteriol.,
178, 6459-6465.
202. Shashkov, A.S., Toukach, F.V., Paramonov, N.A., Ziolkowski, A.,
Senchenkova, S.N., Kaca, W., Knirel, Y.A. (1996) Structures of new acidic
O-specific polysaccharides of the bacterium Proteus mirabilis serogroups O26
and O30. FEBS Lett., 386, 247-251.
203. Swierzko,A., Shashkov, A.S., Senchenkova, S.N., Toukach, F.V., Ziolkowski,
A., Cedzynski, M., Paramonov, N.A., Kaca, W., Knirel, Y.A. (1996) Structural
and serological studies of the O-specific polysaccharide of the bacterium
Proteus mirabilis O10 containing L-altruronic acid, a new component of
O-antigens. FEBS Lett., 398, 297-302.
204. Knirel, Y.A., Senchenkova, S.N., Jansson, P.-E., Weintraub, A.,
Ansaruzzaman, M., Albert, M.J. (1996) Structure of the O-specific
polysaccharide of an Aeromonas trota strain cross-reactive with Vibrio cholerae
O139 Bengal. Eur. J. Biochem., 238, 160-165.
205. Senchenkova, S.N., Knirel, Y.A., Shashkov, A.S., McGovern, J.J., Moran,
A.P. (1996) The O-specific polysaccharide chain of Campylobacter fetus serotype
B lipopolysaccharide is a linear D-rhamnan terminated with
3-O-methyl-D-rhamnose (D-acofriose). Eur. J. Biochem., 239, 434-438.
206. Sidorczyk, Z., Zych, K., Swierzko, A., Vinogradov, E.V., Knirel, Y.A.
(1996) The structure of the O-specific polysaccharide
of Proteus penneri 52. Eur. J. Biochem., 240, 245-251.
207. Kocharova, N.A., Knirel, Y.A., Stanislavsky, E.S., Kholodkova, E.V.,
Lugowski, C., Jachymek, W., Romanowska, E. (1996) Structural and serological
studies of lipopolysaccharides of Citrobacter O35 and O38 antigenically related
to Salmonella. FEMS Immunol. Med. Microbiol., 13, 1-8.
208. Bartodziejska, B., Radziejewska-Lebrecht, J., Lipinska, M., Knirel, Y.A.,
Kononov, L.O., Chernyak, A.Y., Mayer, H., Rozalski, A. (1996) Structural and
immunochemical studies on the lipopolysaccharide of the 'T-antigen'-containing
mutant Proteus mirabilis R14/1959. FEMS Immunol. Med. Microbiol., 13, 113-121.
209. Knirel, Y.A., Helbig, J.H., Zähringer, U. (1996) Structure of a
decasaccharide isolated by mild acid degradation and dephosphorylation of the
lipopolysaccharide of Pseudomonas fluorescens strain ATCC 49271. Carbohydr.
Res., 283, 129-139.
210. Knirel, Y.A., Zdorovenko, G.M., Paramonov, N.A., Veremeychenko, S.N.,
Toukach, F.V., Shashkov, A.S. (1996) Somatic antigens of pseudomonads:
Structure of the O-specific polysaccharide of the reference strain for
Pseudomonas fluorescens (IMV 4125, ATCC 13525, biovar A). Carbohydr. Res., 291,
217-224.
211. Katzenellenbogen, E., Kubler, J., Gamian, A., Romanowska, E., Shashkov,
A.S., Kocharova, N.A., Knirel, Y.A., Kochetkov, N.K. (1996) Structure and
serological characterization of the O-specific polysaccharide of Hafnia alvei
PCM 1185, another Hafnia O-antigen that contains
3-[(R)-3-hydroxybutyramido]-3,6-dideoxy-D-glucose. Carbohydr. Res., 293, 61-70.
212. Senchenkova, S.N., Shashkov, A.S., Knirel, Y.A., Kochetkov, N.K., Zych,
K., Sidorczyk, Z. (1996) Structure of a new N-acetylisomuramic acid-containing
O-specific polysaccharide from Proteus penneri 19 and 35. Carbohydr. Res., 293,
71-78.
213. Knirel, Y.A., Moll, H., Zähringer, U. (1996) Structural study on a highly
O-acetylated core of Legionella pneumophila serogroup 1 lipopolysaccharide.
Carbohydr. Res., 293, 223-234.
214. Toukach, F.V., Shashkov, A.S., Katzenellenbogen, E., Kocharova, N.A.,
Czarny, A., Knirel, Y.A., Romanowska, E., Kochetkov, N.K. (1996) Structure of
the O-specific polysaccharide of Hafnia alvei strain 1222 containing
2-aminoethyl phosphate. Carbohydr. Res., 295, 117-126.
215. Sidorczyk, Z., Swierzko, A., Zych, K., Paramonov, N.A., Vinogradov, E.V.,
Shashkov, A.S., Knirel, Y.A. (1996) Structure of the O-specific polysaccharide
chain and serological characterization of the Proteus penneri 62
lipopolysaccharide compared with the lipopolysaccharides of the related P.
penneri strains. Arch. Immunol. Ther. Exp., 44, 179-185.
216. Swierzko, A.S., Cedzynski, M., Amano, K.-I., Knirel, Y.A., Ziolkowski, A.,
Kaca, W. (1996) The serological reactivity of Proteus
mirabilis OXK lipopolysaccharides and Orientia tsutsugamushi surface antigens.
In Rickettsiae and rickettsial diseases, Proc. Vth Intern. Symp. (Kazar,J., Toman,R., eds.), pp. 97-102. Veda, Bratislava.
217. Cedzynski, M., Ziolkowski, A., Swierzko, A.S., Knirel, Y.A., Amano, K.-I.,
Rozalski, A., Kaca, W. (1996) The serological
specificity of Proteus vulgaris OX2 and Rickettsia japonica surface antigens.
In Rickettsiae and rickettsial diseases, Proc. Vth Intern. Symp.,
Veda, Bratislava (Kazar, J., Toman, R., eds.) pp. 261-265. .
218. Shashkov, A.S., Toukach, F.V., Paramonov, N.A., Senchenkova, S.N., Kaca,
W., Knirel, Y.A. (1996) Structure of a new lysine-containing O-specific
polysaccharide of the bacterium Proteus mirabilis O26. Biokhimiya, 61, 24-33
[In Russian; English translation: Biochemistry (Moscow), 61, 15-22].
219. Shashkov, A.S., Toukach, F.V., Ziolkowski, A., Paramonov, N.A.,
Senchenkova, S.N., Kaca, W., Knirel, Y.A. (1996) Structure of the O-specific
polysaccharide of the bacterium Proteus mirabilis O30. Biokhimiya, 61, 800-806
[In Russian; English translation: Biochemistry (Moscow), 61, 575-579].
220. Varbanets, L.D., Kocharova, N.A., Knirel, Y.A., Moskalenko, N.V. (1996)
Structure of the O-specific polysaccharide chains of the lipopolysaccharides of
Burkholderia (Pseudomonas) solanacearum ICMP 750, 8093, 8115, 7864, and 7945.
Biokhimiya, 61, 807-814 [In Russian; English translation: Biochemistry (Moscow),
61, 580-585].
221. Shashkov, A.S., Senchenkova, S.N., Toukach, F.V., Ziolkowski, A.,
Paramonov, N.A., Kaca, W., Knirel, Y.A., Kochetkov, N.K. (1996) Structure of
the O-specific polysaccharide of the bacterium Proteus mirabilis O10 containing
L-altruronic acid, a new component of O-antigens. Biokhimiya, 61, 1554-1562 [In
Russian; English translation: Biochemistry (Moscow), 61, 1100-1105].
1997
222. Ziolkowski, A., Shashkov, A.S., Swierzko, A., Senchenkova, S.N., Toukach,
F.V., Cedzynski, M., Amano, K.-I., Kaca, W., Knirel, Y.A. (1997) Structures of
the O-antigens of Proteus bacilli belonging to OX group (serogroups O1-O3) used
in Weil-Felix test. FEBS Lett., 411, 221-224.
223. Senchenkova, S.N., Shashkov, A.S., Knirel, Y.A., McGovern, J.J., Moran,
A.P. (1997) The O-specific polysaccharide chain of Campylobacter fetus serotype
A lipopolysaccharide is a partially O-acetylated 1,3-linked α-D-mannan.
Eur. J. Biochem., 245, 637-641.
224. Knirel, Y.A., Widmalm, G., Senchenkova, S.N., Jansson, P.-E., Weintraub,
A. (1997) Structural studies on the short-chain lipopolysaccharide of Vibrio
cholerae O139 Bengal. Eur. J. Biochem., 247, 402-410.
225. Knirel, Y.A., Kaca, W., Paramonov, N.A., Cedzynski, M., Vinogradov, E.V.,
Ziolkowski, A., Shashkov, A.S., Rozalski, A. (1997) Structure of the O-specific
polysaccharide of Proteus vulgaris O25 containing
3-O-[(R)-1-carboxyethyl]-D-glucose. Eur. J. Biochem., 247, 951-954.
226. Fukuoka, S., Knirel, Y.A., Lindner, B., Moll, H., Seydel, U., Zähringer,
U. (1997) Elucidation of the structure of the core region and the complete
structure of the R-type lipopolysaccharide of Erwinia carotovora FERM P-7576.
Eur. J. Biochem., 250, 55-62.
227. Arbatsky, N.P., Shashkov, A.S., Widmalm, G., Knirel, Y.A., Zych, K.,
Sidorczyk, Z. (1997) Structure of the O-specific polysaccharide of Proteus
penneri strain 25 containing N-(L-alanyl) and multiple O-acetyl groups in a
tetrasaccharide repeating unit. Carbohydr. Res., 298, 229-235.
228. Gorshkova, R.P., Nazarenko, E.L., Zubkov, V.A., Shashkov, A.S., Knirel,
Y.A., Paramonov, N.A., Meshkov, S.V., Ivanova, E.P. (1997) Structure of the
capsular polysaccharide from Alteromonas nigrifaciens IAM 13010T containing
2-acetamido-2,6-dideoxy-L-talose and 3-deoxy-D-manno-octulosonic acid.
Carbohydr. Res., 299, 69-76.
229. Zähringer, U., Rettenmaier, H., Senchenkova, S.N., Knirel, Y.A. (1997)
Structure of a new 6-deoxy-α-D-talan from Burkholderia (Pseudomonas) plantarii strain DSM 6535,
which is different from the O-chain of the lipopolysaccharide. Carbohydr. Res.,
300, 143-151.
230. Senchenkova, S.N., Shashkov, A.S., Knirel, Y.A., Schwarzmuller, E., Mayer,
H. (1997) Structure of the O-specific polysaccharide of Salmonella enterica
ssp. arizonae O50 (Arizona O9a,9b). Carbohydr. Res.,
301, 61-67.
231. Shashkov, A.S., Senchenkova, S.N., Nazarenko, E.L., Zubkov, V.A.,
Gorshkova, N.M., Knirel, Y.A., Gorshkova, R.P. (1997) Structure of a
phosphorylated polysaccharide from Shewanella putrefaciens strain S29.
Carbohydr. Res., 303, 333-338.
232. Knirel, Y.A., Moll, H., Helbig, J.H., Zähringer, U. (1997) Chemical
characterization of a new 5,7-diamino-3,5,7,9-tetradeoxynonulosonic acid
released by mild acid hydrolysis of the Legionella pneumophila serogroup 1
lipopolysaccharide. Carbohydr. Res., 304, 77-79.
233. Moll, H., Knirel, Y.A., Helbig, J.H., Zähringer, U. (1997) Identification
of an α-D-Manp-(1-->8)-Kdo
disaccharide in the inner core region and the structure of the complete core
region of the Legionella pneumophila serogroup 1 lipopolysaccharide. Carbohydr.
Res., 304, 91-95.
234. Kocharova, N.A., Bystrova, O.V., Borisova, S.A., Shashkov, A.S., Knirel,
Y.A., Kholodkova, E.V., Stanislavsky, E.S. (1997) Structures of two O-specific
polysaccharides of Citrobacter O29. Carbohydr. Lett.,
2, 287-292.
235. Gamzazade, A., Sklyar, A., Nasibov, A., Sushkov, I., Shashkov, A., Knirel,
Y. (1997) Structural features of sulfated chitosans. Carbohydr. Polym., 34, 113-116.
236. Zych, K., Kowalczyk, M., Toukach, F.V., Paramonov, N.A., Shashkov, A.S.,
Knirel, Y.A., Sidorczyk, Z. (1997) Structural and immunochemical studies of
O-specific polysaccharide of Proteus penneri strain 15. Arch. Immunol. Ther.
Exp., 45, 435-441.
237. Zdorovenko, G., Knirel, Y., Solyanik, L., Yakovleva, L., Vassilev, V.
(1997) Macromolecular characteristics and structure of the O-specific
polysaccharide chain of Pseudomonas syringae pv. tomato
O-antigen. In Pseudomonas syringae pathovars and related pathogens, Proc. 5th
Intern. Working Group, Berlin, September 3-8, 1995 (Rudolph, K., Burr, T.J.,
Mansfield, J.W., Stead, D., Vivian, A., von Kietzell, J., eds.) pp. 300-304.
Kluwer Academic Publishers, Dordrecht, Boston, London.
238. Varbanets, L., Moskalenko, N., Knirel, Y., Kocharova, N., Muras, V.,
Chitchevitch, N. (1997) Studies on the structure and activity of Burkholderia
solanacearum lipopolysaccharides (a review). In Pseudomonas syringae pathovars
and related pathogens, Proc. 5th Intern. Working Group, Berlin, September 3-8,
1995 (Rudolph,K., Burr,T.J., Mansfield,J.W., Stead,D.,
Vivian,A., von Kietzell,J., eds.) pp. 484-489. Kluwer Academic Publishers,
Dordrecht, Boston, London.
239. Ovod, V., Knirel, Y., Krohn, K. (1997) Demonstration of the immunochemical
diversity of O-chains of lipopolysaccharide of Pseudomonas syringae and
inferring of the serogroup- and serotype-specific epitopes with monoclonal
antibodies. In Pseudomonas syringae pathovars and related pathogens, Proc. 5th
Intern. Working Group, Berlin, September 3-8, 1995 (Rudolph, K., Burr, T.J.,
Mansfield, J.W., Stead, D., Vivian, A., von Kietzell, J., eds.) pp. 532-537.
Kluwer Academic Publishers, Dordrecht, Boston, London.
240. Knirel, Y.A., Zdorovenko, G.M. (1997) Structures of O-polysaccharide
chains of lipopolysaccharides as the basis for classification of Pseudomonas
syringae and related strains (a review). In Pseudomonas syringae pathovars and
related pathogens, Proc. 5th Intern. Working Group, Berlin, September 3-8, 1995
(Rudolph,K., Burr,T.J., Mansfield,J.W., Stead,D.,
Vivian,A., von Kietzell,J., eds.) pp. 475-480. Kluwer Academic Publishers,
Dordrecht, Boston, London.
241. Cedzynski, M., Knirel, Y.A., Amano, K.-I., Swierzko, A., Paramonov, N.A.,
Senchenkova, S.N., Kaca, W. (1997) Structural and serological studies of the
O-antigen of Proteus vulgaris OX2 (serogroup O2) used in the Weil-Felix test.
Biokhimiya, 62, 20-27 [In Russian; English translation: Biochemistry (Moscow),
62, 15-20].
242. Swierzko, A., Cedzynski, M., Knirel, Y.A., Senchenkova, S.N., Kocharova,
N.A., Shashkov, A.S., Amano, K.-I., Kyohno, K., Kaca, W. (1997) Structural and
serological studies of the O-antigen of the bacterium Proteus mirabilis OXK
(serogroup O3) used in the Weil-Felix text. Biokhimiya, 62, 28-35 [In Russian;
English translation: Biochemistry (Moscow), 62, 21-27].
243. Senchenkova, S.N., Shashkov, A.S., Toukach, F.V., Ziolkowski, A.,
Swierzko, A., Amano, K.-I., Kaca, W., Knirel, Y.A., Kochetkov, N.K. (1997)
Structure of the acid-labile galactosyl phosphate-containing O-antigen of
Proteus vulgaris OX19 (serogroup O1) used in the Weil-Felix test. Biokhimiya,
62, 541-549 [In Russian; English translation: Biochemistry (Moscow), 62,
461-468].
244. Shashkov, A.S., Toukach, F.V., Senchenkova, S.N., Ziolkowski, A.,
Paramonov, N.A., Kaca, W., Knirel, Y.A., Kochetkov, N.K. (1997) Structure of
the O-specific polysaccharide of the bacterium Proteus mirabilis O13 containing
a novel amide of D-galacturonic acid with Nε-(1-carboxyethyl)lysine. Biokhimiya,
62, 597-602 [In Russian; English translation: Biochemistry (Moscow), 62,
509-513].
245. Kocharova, N.A., Shcherbakova, O.V., Shashkov, A.S., Knirel, Y.A.,
Kochetkov, N.K., Kholodkova, E.V., Stanislavsky, E.S. (1997) Structure of the
O-specific polysaccharide of the bacterium Providencia alcalifaciens serogroup
O23 containing a novel amide of D-glucuronic acid with Nε-(1-carboxyethyl)lysine. Biokhimiya, 62, 588-596 [In Russian; English
translation: Biochemistry (Moscow), 62, 501-508].
246. Zatonsky, G.V., Kocharova, N.A., Katzenellenbogen, E., Shashkov, A.S.,
Knirel, Y.A. (1997) NMR spectroscopic elucidation of the structure of a
glycerol teichoic acid-like O-specific polysaccharide of the bacterium Hafnia
alvei strain PCM 1199. Biokhimiya, 62, 1692-1698 [In Russian; English
translation: Biochemistry (Moscow), 62, 1448-1453].
247. Senchenkova, S.N., Zatonsky, G.V., Ujazda, E., Shashkov, A.S., Kaca, W.,
Knirel, Y.A. (1997) Structure of the neutral O-specific polysaccharide of the
bacterium Proteus mirabilis O24. Biokhimiya, 62, 1688-1691 [In Russian; English
translation: pp. 1444-1447].
1998
248. Lüneberg, E., Zähringer, U., Knirel, Y.A., Steinmann, D., Hartmann, M.,
Steinmetz, I., Rohde, M., Kohl, J., Frosch, M. (1998) Phase-variable expression
of lipopolysaccharide contributes to the virulence of Legionella pneumophila.
J. Exp. Med., 188, 49-60.
249. Katzenellenbogen, E., Kocharova, N.A., Zatonsky, G.V., Mieszala, M.,
Gamian, A., Bogulska, M., Shashkov, A.S., Romanowska, E., Knirel, Y.A. (1998)
Immunochemical studies of the O-specific polysaccharide of lipopolysaccharide
of Hafnia alvei PCM 1199 related to H. alvei PCM 1205. Eur. J. Biochem., 251,
980-985.
250. Shashkov, A.S., Arbatsky, N.P., Widmalm, G., Knirel, Y.A., Zych, K.,
Sidorczyk, Z. (1998) Structure and serological specificity of the O-specific
polysaccharide of Proteus penneri strain 26. Eur. J. Biochem., 253, 730-733.
251. Senchenkova, S.N., Zatonsky, G.V., Shashkov, A.S., Knirel, Y.A., Jansson,
P.-E., Weintraub, A., Albert, M.J. (1998) Structure of the O-antigen of Vibrio
cholerae O155 that shares a putative D-galactose-4,6-cyclophosphate-associated
epitope with V. cholerae O139 Bengal. Eur. J. Biochem., 254, 58-62.
252. Bartodziejska, B., Shashkov, A.S., Babicka, D., Grachev, A.A., Torzewska,
A., Paramonov, N.A., Chernyak, A.Y., Rozalski, A., Knirel, Y.A. (1998)
Structural and serological studies on a new acidic O-specific polysaccharide of
Proteus vulgaris O32. Eur. J. Biochem., 256, 488-493.
253. Knirel, Y.A., Ovod, V.V., Zdorovenko, G.M., Gvozdyak, R.I., Krohn, K.
(1998) Structure of the O polysaccharide and immunochemical relationships
between the lipopolysaccharides of Pseudomonas syringae pathovar tomato and
pathovar maculicola. Eur. J. Biochem., 258, 657-661.
254. Knirel, Y.A., Ovod, V.V., Paramonov, N.A., Krohn, K. (1998) Structural
heterogeneity in the O polysaccharide of Pseudomonas syringae pv. coriandricola GSPB 2028 (NCPPB
3780, W-43). Eur. J. Biochem., 258, 716-721.
255. Zych, K., Knirel, Y.A., Paramonov, N.A., Vinogradov, E.V., Arbatsky, N.P.,
Senchenkova, S.N., Shashkov, A.S., Sidorczyk, Z. (1998) Structure of the
O-specific polysaccharide of Proteus penneri strain 41 from a new proposed
serogroup O62. FEMS Immunol. Med. Microbiol., 21, 1-9.
256. Cedzynski, M., Swierzko, A.S., Ziolkowski, A., Rozalski, A., Kaca, W.,
Paramonov, N.A., Vinogradov, E.V., Knirel, Y.A. (1998) Structural and
immunochemical studies of two cross-reactive Proteus mirabilis O-antigens, O6
and O23, containing β1-->3-linked 2-acetamido-2-deoxy-D-glucopyranose residues. Microbiol.
Immunol., 42, 7-14.
257. Kaca, W., Swierzko, A.S., Ziolkowski, A., Amano, K.-I., Senchenkova, S.N.,
Knirel, Y.A. (1998) Serological studies of an acid-labile O-polysaccharide of
Proteus vulgars OX19 lipopolysaccharide using human and rabbit antibodies.
Microbiol. Immunol., 42, 669-675.
258. Velasco, J., Moll, H., Knirel, Y.A., Sinnwell, V., Moriyon, I., Zähringer,
U. (1998) Structural studies on the lipopolysaccharide from a rough strain of
Ochrobactrum anthropi containing a 2,3-diamino-2,3-dideoxy-D-glucose
disaccharide lipid A backbone. Carbohydr. Res., 306, 283-290.
259. Shashkov, A.S., Paramonov, N.A., Veremeychenko, S.N., Grosskurth, H.,
Zdorovenko, G.M., Knirel, Y.A., Kochetkov, N.K. (1998) Somatic antigens of
pseudomonads: structure of the O-specific polysaccharide of Pseudomonas
fluorescens biovar B, strain IMV 247. Carbohydr. Res., 306, 297-303.
260. Kocharova, N.A., Borisova, S.A., Zatonsky, G.V., Shashkov, A.S., Knirel,
Y.A., Kholodkova, E.V., Stanislavsky, E.S. (1998) Structure of the O-specific
polysaccharide of Citrobacter O3a,1b,1c. Carbohydr. Res., 306, 331-333.
261. Hanniffy, O., Shashkov, A.S., Senchenkova, S.N., Tomshich, S.V.,
Komandrova, N.A., Romanenko, L.A., Knirel, Y.A., Savage, A.V. (1998) Structure
of a highly acidic O-specific polysaccharide from Pseudoalteromonas
haloplanktis KMM 223 (44-1) containing L-iduronic acid. Carbohydr. Res., 307,
291-298.
262. Shashkov, A.S., Senchenkova, S.N., Nazarenko, E.L., Zubkov, V.A.,
Gorshkova, N.M., Knirel, Y.A., Gorshkova, R.P. (1998) Structure of the acidic
polysaccharide chain of the lipopolysaccharide of Shewanella alga 48055.
Carbohydr. Res., 309, 103-108.
263. Kocharova, N.A., Vinogradov, E.V., Borisova, S.A., Shashkov, A.S., Knirel,
Y.A. (1998) Identification of Nε-[(R)-1-carboxyethyl]-L-lysine in,
and the complete structure of, the repeating unit of the O-specific
polysaccharide of Providencia alcalifaciens O23. Carbohydr. Res., 309, 131-133.
264. Arbatsky, N.P., Mamyan, S.S., Shashkov, A.S., Knirel, Y.A., Kochetkov,
N.K., Zych, K., Sidorczyk, Z. (1998) Structure of the O-specific polysaccharide
of a serologically separate Proteus penneri strain 22. Carbohydr. Res., 310,
85-90.
265. Knirel, Y.A., Senchenkova, S.N., Jansson, P.-E., Weintraub,A. (1998) More on the structure of Vibrio cholerae O22
lipopolysaccharide. Carbohydr. Res., 310, 117-119.
266. Toukach, F.V., Arbatsky, N.P., Shashkov, A.S., Knirel, Y.A., Zych, K.,
Sidorczyk, Z. (1998) Structure of a neutral O-specific polysaccharide of
Proteus penneri 34. Carbohydr. Res., 312, 97-101.
1999
267. Zou, C.H., Knirel, Y.A., Helbig, J.H., Zähringer, U., Mintz, C.S. (1999)
Molecular cloning and characterization of a locus responsible for O-acetylation
of the O-polysaccharide of Legionella pneumophila serogroup 1
lipopolysaccharide. J. Bacteriol., 181, 4137-4141.
268. Ovod, V., Knirel, Y.A., Samson, R., Krohn, K. (1999) Immunochemical
characterization and taxonomic evaluation of the O polysaccharides of the
lipopolysaccharides of Pseudomonas syringae serogroup O1 strains. J.
Bacteriol., 181, 6937-6947.
269. Literacka, E., Perepelov, A.V., Senchenkova, S.N., Zatonsky, G.V.,
Shashkov, A.S., Knirel, Y.A., Kaca, W. (1999) Structures of the O-specific
polysaccharides and a serological cross-reactivity of the lipopolysaccharides
of Proteus mirabilis O24 and O29. FEBS Lett., 456,
227-231.
270. Bartodziejska, B., Shashkov, A.S., Torzewska, A., Grachev, A.A.,
Ziolkowski, A., Paramonov, N.A., Rozalski, A., Knirel, Y.A. (1999) Structure
and serological specificity of a new acidic O-specific polysaccharide of
Proteus vulgaris O45. Eur. J. Biochem., 259, 212-217.
271. Perepelov, A.V., Ujazda, E., Senchenkova, S.N., Shashkov, A.S., Kaca, W.,
Knirel, Y.A. (1999) Structural and serological studies on the O-antigen of
Proteus mirabilis O14, a new polysaccharide containing
2-[(R)-1-carboxyethylamino]ethyl phosphate. Eur. J.
Biochem., 261, 347-353.
272. Shashkov, A.S., Arbatsky, N.P., Toukach, F.V., Knirel, Y.A., Moll, H.,
Zähringer, U., Zych, K., Sidorczyk, Z. (1999) Structure of the O-specific
polysaccharide of a serologically separate strain of Proteus penneri 2 from a
new proposed serogroup O66. Eur. J. Biochem., 261, 392-397.
273. Knirel, Y.A., Kocharova, N.A., Hynes, S.O., Widmalm, G., Andersen, L.P.,
Jansson, P.-E., Moran, A.P. (1999) Structural studies on lipopolysaccharides of
serologically non-typable strains of Helicobacter pylori, AFI and 007,
expressing Lewis antigenic determinants. Eur. J. Biochem., 266, 123-131.
274. Katzenellenbogen, E., Kocharova, N.A., Zatonsky, G.V., Bogulska, M.,
Witkowska, D., Shashkov, A.S., Romanowska, E., Knirel, Y.A. (1999) Structure of
the O-specific polysaccharide of Hafnia alvei strain 23 having an oligosaccharide-phosphate
repeating unit. J. Carbohydr. Chem., 18, 545-558.
275. Toukach, F.V., Bartodziejska, B., Senchenkova, S.N., Wykrota, M.,
Shashkov, A.S., Rozalski, A., Knirel, Y.A. (1999) Structure of a new acidic
O-antigen of Proteus vulgaris O22 containing O-acetylated 3-acetamido-3,6-dideoxy-D-glucose. Carbohydr. Res., 318, 146-153.
276. Perepelov, A.V., Babicka, D., Shashkov, A.S., Arbatsky, N.P., Senchenkova,
S.N., Rozalski, A., Knirel, Y.A. (1999) Structure and cross-reactivity of the
O-antigen of Proteus vulgaris O8. Carbohydr. Res., 318, 186-192.
277. Hanniffy, O., Shashkov, A.S., Moran, A.P., Prendergast, M.M., Senchenkova,
S.N., Knirel, Y.A., Savage, A.V. (1999) Chemical structure of a polysaccharide
from Campylobacter jejuni 176.83 (serotype O:41) containing only furanose
sugars. Carbohydr. Res., 319, 124-132.
278. Senchenkova, S.N., Shashkov, A.S., Laux, P., Knirel, Y.A., Rudolph, K.
(1999) The O-chain polysaccharide of the lipopolysaccharide of Xanthomonas
campestris pv. begoniae GSPB
525 is a partially L-xylosylated L-rhamnan. Carbohydr. Res., 319, 148-153.
279. Shashkov, A.S., Arbatsky, N.P., Cedzynski, M., Kaca, W., Knirel, Y.A.
(1999) Structure of an acidic O-specific polysaccharide of Proteus mirabilis
O5. Carbohydr. Res., 319, 199-203.
280. Hanniffy, O., Shashkov, A.S., Senchenkova, S.N., Tomshich, S.V.,
Komandrova, N.A., Romanenko, L.A., Knirel, Y.A., Savage, A.V. (1999) Structure
of an acidic O-specific polysaccharide of Pseudoalteromonas haloplanktis type
strain ATCC 14393 containing 2-acetamido-2-deoxy-D- and -L-galacturonic acids
and 3-(N-acetyl-D-alanyl)amino-3,6-dideoxy-D-glucose. Carbohydr. Res., 321,
132-138.
281. Knirel, Y.A., Kaca, W., Rozalski, A., Sidorczyk, Z. (1999) Structure of
the O-antigenic polysaccharides of Proteus bacteria (a review). Polish J.
Chem., 73, 895-907.
282. Zatonsky, G.V., Bystrova, O.V., Kocharova, N.A., Shashkov, A.S., Knirel,
Y.A., Kholodkova, E.V., Stanislavsky, E.S. (1999) Structure of a neutral
O-specific polysaccharide of the bacterium Providencia alcalifaciens O5.
Biokhimiya, 64, 628-633 [In Russian; English translation: Biochemistry
(Moscow), 64, 523-527].
283. Zdorovenko, E.L., Ovod, V., Shashkov, A.S., Kocharova, N.A., Knirel, Y.A.,
Krohn, K. (1999) Structure of the O-polysaccharide of the lipopolysaccharide of
Pseudomonas syringae pv. garcae ICMP 8047. Biokhimiya,
64, 914-923 [In Russian; English translation: Biochemistry (Moscow), 64,
765-773].
2000
284. Kocharova, N.A., Knirel, Y.A., Widmalm, G., Jansson, P.-E., Moran, A.P.
(2000) Structure of an atypical O-antigen polysaccharide of Helicobacter pylori
containing a novel monosaccharide 3-C-methyl-D-mannose. Biochemistry, 39,
4755-4760.
285. Shashkov, A.S., Kondakova, A.N., Senchenkova, S.N., Zych, K., Toukach,
F.V., Knirel, Y.A., Sidorczyk, Z. (2000) Structure of a 2-aminoethyl
phosphate-containing O-specific polysaccharide of Proteus penneri 63 from a new
serogroup O68. Eur. J. Biochem., 267, 601-605.
286. Perepelov, A.V., Torzewska, A., Shashkov, A.S., Senchenkova, S.N.,
Rozalski, A., Knirel, Y.A. (2000) Structure of a glycerol teichoic acid-like
O-specific polysaccharide of Proteus vulgaris O12. Eur. J. Biochem., 267,
788-793.
287. Zych, K., Kocharova, N.A., Kowalczyk, M., Toukach, F.V., Kaminska, D.,
Shashkov, A.S., Knirel, Y.A., Sidorczyk, Z. (2000) Structure of the O-specific
polysaccharide of Proteus penneri 71 and classification of cross-reactive P.
penneri strains to a new proposed serogroup O64. Eur. J. Biochem., 267,
808-814.
288. Knirel, Y.A., Zych, K., Vinogradov, E.V., Shashkov, A.S., Sidorczyk, Z.
(2000) Structure of a 2-aminoethyl phosphate-containing O-specific
polysaccharide of Proteus penneri 8 from a new serogroup O67. Eur. J. Biochem.,
267, 815-820.
289. Kawahara, K., Moll, H., Knirel, Y.A., Seydel, U., Zähringer, U. (2000) Structural
analysis of two glycosphingolipids from the lipopolysaccharide-lacking
bacterium Sphingomonas capsulata. Eur. J. Biochem., 267, 1837-1846.
290. Ovod, V., Zdorovenko, E.L., Shashkov, A.S., Kocharova, N.A., Knirel, Y.A.
(2000) Structure of the O polysaccharide and serological classification of
Pseudomonas syringae pv. ribicola
NCPPB 1010. Eur. J. Biochem., 267, 2372-2379.
291. Zähringer, U., Moll, H., Hettmann, T., Knirel, Y.A., Schafer, G. (2000)
Cytochrome b558/566 from the archaeon Sulfolobus acidocaldarius has a unique
Asn-linked highly branched hexasaccharide chain containing 6-sulfoquinovose.
Eur. J. Biochem., 267, 4144-4149.
292. Bartodziejska, B., Toukach, F.V., Vinogradov, E.V., Senchenkova, S.N.,
Shashkov, A.S., Ziolkowski, A., Czaja, J., Perry, M.B., Knirel, Y.A., Rozalski,
A. (2000) Structural and serological studies of two related O-specific
polysaccharides of Proteus vulgaris O21 and Proteus mirabilis O48 having
oligosaccharide-phosphate repeating units. Eur. J. Biochem., 267, 6888-6896.
293. Lüneberg, E., Zetzmann, N., Alber, D., Knirel, Y.A., Kooistra, O.,
Zähringer, U., Frosch, M. (2000) Cloning and functional characterization of a
30 kb gene locus required for lipopolysaccharide biosynthesis in Legionella
pneumophila. Int. J. Microbiol. Med., 290, 37-49.
294. Kaca, W., Amano, K.-I., Chernyak, A.Y., Knirel, Y.A. (2000) Human
anti-scrub typhus rickettsia antibodies and rabbit anti- Proteus antibodies
recognize similar epitopes in the O-polysaccharide part of Proteus mirabilis
OXK lipopolysaccharide. Microbios, 130, 151-161.
295. Perepelov, A.V., Senchenkova, S.N., Shashkov, A.S., Komandrova, N.A.,
Tomshich, S.V., Shevchenko, L.S., Knirel, Y.A., Kochetkov, N.K. (2000) First
application of triflic acid for selective cleavage of glycosidic linkages in
structural studies of a bacterial polysaccharide from Pseudoalteromonas sp. KMM
634. J. Chem. Soc., Perkin Trans. 1, 363-366.
296. Arbatsky, N.P., Shashkov, A.S., Literacka, E., Widmalm, G., Kaca, W.,
Knirel, Y.A. (2000) Structure of the O-specific polysaccharide of Proteus
mirabilis O11, another Proteus O-antigen containing an amide of D-galacturonic
acid with L-threonine. Carbohydr. Res., 323, 81-86.
297. Shashkov, A.S., Senchenkova, S.N., Laux, P., Ahohuendo, B.C., Kecskes,
M.L., Rudolph, K., Knirel, Y.A. (2000) Structure of the O-chain polysaccharide
of the lipopolysaccharide of Xanthomonas campestris pv. manihotis
GSPB 2755 and GSPB 2364. Carbohydr. Res., 323, 235-239.
298. Perepelov, A.V., Babicka, D., Shashkov, A.S., Senchenkova, S.N., Rozalski,
A., Knirel, Y.A. (2000) Structure of the O-specific polysaccharide of the
bacterium Proteus vulgaris O46. Carbohydr. Res., 328, 229-234.
299. Perepelov, A.V., Senchenkova, S.N., Cedzynski, M., Ziolkowski, A.,
Vinogradov, E.V., Kaca, W., Shashkov, A.S., Knirel, Y.A. (2000) Isolation using
triflic acid solvolysis and identification of Nε-[(R)-1-carboxyethyl]-Nα-(D-galacturonoyl)-L-lysine as a
component of the O-specific polysaccharide of Proteus mirabilis O13. Carbohydr.
Res., 328, 441-444.
300. Shashkov, A.S., Senchenkova, S.N., Vinogradov, E.V., Zatonsky, G.V.,
Knirel, Y.A., Literacka, E., Kaca, W. (2000) Full structure of the O-specific
polysaccharide of Proteus mirabilis O24 containing
3,4-O-[(S)-1-carboxyethylidene]-D-galactose. Carbohydr. Res., 329, 453-457.
301. Senchenkova, S.N., Shashkov, A.S., Kecskes, M.L., Ahohuendo, B.C., Knirel,
Y.A., Rudolph, K. (2000) Structure of the O-specific polysaccharides of the
lipopolysaccharides of Xanthomonas campestris pv. vignicola
GSPB 2795 and GSPB 2796. Carbohydr. Res., 329, 831-838.
302. Tsvetkov, Y.E., Shashkov, A.S., Knirel, Y.A., Backinowsky, L.V.,
Zähringer, U. (2000) Synthesis of
5,7-diacetamido-3,5,7,9-tetradeoxy-L-glycero-D-galacto- and
-L-glycero-D-talo-nonulosonic acids, putative components of bacterial
lipopolysaccharide. Mendeleev Commun., 90-92.
303. Bartodziejska, B., Torzewska, A., Babicka, D., Wykrota, M., Rozalski, A.,
Perepelov, A.V., Toukach, F.V., Knirel, Y.A. (2000) Epitope specificity of
polyclonal rabbit antisera against Proteus vulgaris O-antigens. Adv. Exp. Med. Biol., 485,
243-247; Proc. FEMS Symp. Genes and Proteins Underlying
Microbial Urinary Tract Virulence: Basic Aspects and Applications, September
16-19, 1999, Pecs, Hungary. Kluwer Academic/Plenum Publishers, New York.
304. Zych, K., Kowalczyk, M., Knirel, Y.A., Sidorczyk, Z. (2000) New serogroups
of the genus Proteus consisting of Protreus penneri strains only. Adv. Exp. Med. Biol., 485,
339-344; Proc. FEMS Symp. Genes and Proteins Underlying
Microbial Urinary Tract Virulence: Basic Aspects and Applications, September
16-19, 1999, Pecs, Hungary. Kluwer Academic/Plenum Publishers, New York.
305. Perepelov, A.V., Shashkov, A.S., Senchenkova, S.N., Knirel, Y.A.,
Literacka, E., Kaca, W. (2000) Structure of the O-specific polysaccharide of
the bacterium Proteus mirabilis O29. Biokhimiya, 65, 213-217 [In Russian;
English translation: Biochemistry (Moscow), 65, 176-179].
306. Bystrova, O.V., Zatonsky, G.V., Borisova, S.A., Kocharova, N.A., Shashkov,
A.S., Knirel, Y.A., Kholodkova, E.V., Stanislavsky, E.S. (2000) Structure of an
acidic O-specific polysaccharide of the bacterium Providencia alcalifaciens O7.
Biokhimiya, 65, 795-803 [In Russian; English translation: Biochemistry
(Moscow), 65, 677-684].
307. Perepelov, A.V., Shashkov, A.S., Babicka, D., Senchenkova, S.N.,
Bartodziejska, B., Rozalski, A., Knirel, Y.A. (2000) Structure of the
O-specific polysaccharide of the bacterium Proteus vulgaris O23. Biokhimiya,
65, 1247-1252 [In Russian; English translation: Biochemistry (Moscow), 65, 1055-1059].
308. Komandrova, N.A., Tomshich, S.V., Shevchenko, L.S., Perepelov, A.V.,
Senchenkova, S.N., Shashkov, A.S., Knirel, Y.A. (2000) Structure of an acidic
O-specific polysaccharide of the marine bacterium Pseudoalteromonas sp. KMM 634. Biokhimiya, 65, 1253-1261
[In Russian; English translation: Biochemistry (Moscow), 65, 1060-1067].
2001
309. Kooistra, O., Lüneberg, E., Lindner, B., Knirel, Y.
A., Frosch, M., Zähringer, U. (2001) Complex O-acetylation in Legionella
pneumophila serogroup 1 lipopolysaccharide. Evidence for two genes involved in
8-O-acetylation of legionaminic acid. Biochemistry, 40, 7630-7640.
310. Zych, K., Toukach, F. V., Arbatsky, N. P., Kolodziejska, K., Senchenkova,
S. N., Shashkov, A. S., Knirel, Y. A., Sidorczyk, Z. (2001) Structure of the
O-specific polysaccharide of Proteus mirabilis D52 and typing of this strain to
Proteus serogroup O33. Eur. J. Biochem., 268, 4346-4351.
311. Knirel, Y. A., Bystrova, O. V., Shashkov, A. S., Kocharova, N. A.,
Senchenkova, S. N., Moll, H., Lindner, B., Zähringer, U., Hatano, K., Pier, G.
B. (2001) Structural analysis of the lipopolysaccharide core of a rough, cystic
fibrosis isolate of Pseudomonas aeruginosa. Eur. J. Biochem., 268, 4708-4719.
312. Katzenellenbogen, E., Kocharova, N. A., Zatonsky, G. V., Kubler-Kielb, J.,
Gamian, A., Shashkov, A. S., Knirel, Y. A., Romanowska, E. (2001) Structural
and serological studies on Hafnia alvei O-specific polysaccharide of α-D-mannan
type isolated from the lipopolysaccharide of strain PCM 1223. FEMS Immunol. Med.
Microbiol., 30, 223-227.
313. Torzewska, A., Kondakova, A. N., Perepelov, A. V., Senchenkova, S. N.,
Shashkov, A. S., Rozalski, A., Knirel, Y. A. (2001) Structure of the O-specific
polysaccharide of Proteus vulgaris O37 and close serological relatedness of the
lipopolysaccharides of P. vulgaris O37 and P. vulgaris O46. FEMS Immunol. Med.
Microbiol., 31, 227-234.
314. Luck, P. C., Freier, T., Steudel, C., Knirel, Y. A., Lüneberg, E.,
Zähringer, U., Helbig, J. H. (2001) A point mutation in the active site of
Leginella pneumophila O-acetyltransferase resulted in modified
lipopolysaccharide but does not influence virulence. Int. J. Med. Microbiol.,
291, 345-352.
315. Kocharova, N.A., Perepelov, A.V., Zatonsky, G.V., Shashkov, A.S., Knirel,
Y.A., Jansson, P.-E., Weintraub, A. (2001) Structural studies of the O-specific
polysaccharide of Vibrio cholerae O8 using solvolysis with triflic acid.
Carbohydr. Res., 330, 83-92.
316. Muldoon, J., Shashkov, A.S., Senchenkova, S.N., Tomshich, S.V.,
Komandrova, N.A., Romanenko, L.A., Knirel, Y.A., Savage, A.V. (2001) Structure
of an acidic polysaccharide from a marine bacterium Pseudoalteromonas distincta
KMM 638 containing
5-acetamido-3,5,7,9-tetradeoxy-7-formamido-L-glycero-L-manno-nonulosonic acid.
Carbohydr. Res., 330, 231-239.
317. Zdorovenko, E.L., Ovod, V., Zatonsky, G.V., Shashkov, A.S., Kocharova,
N.A., Knirel, Y.A. (2001) Location of the O-methyl groups in the O
polysaccharide of Pseudomonas syringae pv. phaseolicola.
Carbohydr. Res., 330, 505-510.
318. Katzenellenbogen, E., Zatonsky, G.V., Kocharova, N.A., Mieszala, M.,
Gamian, A., Shashkov, A.S., Romanowska, E., Knirel, Y.A. (2001) Structue of the
O-specific polysaccharide of Hafnia alvei PCM 1196. Carbohydr. Res., 330,
523-528.
319. Muldoon, J., Perepelov, A. V., Shashkov, A. S., Gorshkova, R. P.,
Nazarenko, E. L., Zubkov, V. A., Ivanova, E. P., Knirel, Y. A., Savage, A. V.
(2001) Structure of a colitose-containing O-specific polysaccharide of the
marine bacterium Pseudoalteromonas tetraodonis IAM14160T. Carbohydr. Res., 331,
41-56.
320. Kawahara, K., Lindner,B., Isshiki,Y., Jacob,K., Knirel, Y. A., Zähringer,
U. (2001) Structural analysis of a new glycosphingolipid from the
lipopolysaccharide-lacking bacterium Sphingomonas adhaesiva. Carbohydr. Res.,
331, 87-93.
321. Perepelov, A.V., Babicka, D., Senchenkova, S.N., Shashkov, A.S., Moll, H.,
Rozalski, A., Zähringer, U., Knirel, Y.A. (2001) Structure of the O-specific
polysaccharide of Proteus vulgaris O4 containing a new component of bacterial
polysaccharides, 4,6-dideoxy-4-{N-[(R)-3-hydroxybutyryl]-L-alanyl}amino-D-glucose.
Carbohydr. Res., 331, 195-202.
322. Toukach, F.V., Arbatsky, N.P., Shashkov, A.S., Knirel, Y.A., Zych, K.,
Sidorczyk, Z. (2001) Structure of the O-specific polysaccharide of Proteus
mirabilis O16 containing ethanolamine phosphate and ribitol phosphate.
Carbohydr. Res., 331, 213-218.
323. Senchenkova, S.N., Zatonsky, G.V., Hynes, S.O., Widmalm, G., Andersen,
L.P., Knirel, Y.A., Jansson, P.-E., Moran, A.P. (2001) Structure of
D-glycero-D-manno-heptan from the lipopolysaccharide of Helicobacter pylori.
Carbohydr. Res., 331, 219-224.
324. Tsvetkov, Y. E., Shashkov, A. S., Knirel, Y. A., Zähringer, U. (2001)
Synthesis and identification in bacterial lipopolysaccharides of
5,7-diacetamido-3,5,7,9-tetradeoxy-D-glycero-D-galacto- and
-D-glycero-D-talo-nonulosonic acids. Carbohydr. Res., 331, 233-237.
325. Kubler-Kielb, J., Zatonsky, G. V., Katzenellenbogen, E., Kocharova, N. A.,
Szostko, B., Gamian, A., Shashkov, A. S., Knirel, Y. A. (2001) Structure of the
O-specific polysaccharide isolated from the lipopolysaccharide of Citrobacter
gillenii serotype O12a,12b strain PCM 1544. Carbohydr. Res., 331, 331-336.
326. Kocharova, N.A., Knirel, Y.A., Jansson, P.-E., Weintraub, A. (2001)
Structure of the O-specific polysaccharide of Vibrio cholerae O9 containing
2-acetamido-2-deoxy-D-galacturonic acid. Carbohydr. Res., 332, 279-284.
327. Kondakova, A.N., Perepelov, A.V., Bartodziejska, B., Shashkov, A.S.,
Senchenkova, S.N., Wykrota, M., Knirel, Y.A., Rozalski, A. (2001) Structure of
the acidic O-specific polysaccharide from Proteus vulgaris O39 containing
5,7-diacetamido-3,5,7,9-tetradeoxy-L-glycero-L-manno-non-2-ulosonic acid.
Carbohydr. Res., 333, 241-249.
328. Kocharova, N.A., Zatonsky, G.V., Bystrova, O.V., Knirel, Y.A., Kholodkova,
E.V., Stanislavsky, E.S. (2001) Structure of the O-specific polysaccharide of
Citrobacter braakii O7a,3b,1c. Carbohydr. Res., 333, 335-338.
329. Tsvetkov, Y.E., Shashkov, A.S., Knirel, Y.A., Zähringer, U. (2001)
Synthesis and NMR spectroscopy of nine stereoisomeric
5,7-diacetamido-3,5,7,9-tetradeoxynon-2-ulosonic acids. Carbohydr. Res., 335,
221-243.
330. Zdorovenko, E.L., Zatonsky, G. V., Zdorovenko, G. M., Pasichnik, L. A.,
Shashkov, A. S., Knirel, Y. A. (2001) Structural heterogeneity in the
lipopolysaccharides of Pseudomonas syringae with O-polysaccharide chains having
different repeating units. Carbohydr. Res., 336, 329-336.
331. Swierzko, A.S., Cedzynski, M., Ziolkowski, A., Senchenkova, S.N.,
Perepelov, A.V., Knirel, Y.A., Kaca, W. (2001) Structure and serological
characterization of an Nε-(1-carboxyethyl)lysine-containing O-chain of
the lipopolysaccharide of Proteus mirabilis O13. Arch. Immunol. Ther. Exp., 49,
163-169.
332. Jansson, P.-E., Albert, M.J., Knirel, Y.A., Moran, A.P., Kocharova, N.A.,
Senchenkova, S.N., Weintraub, A., Widmalm, G. (2001) Bacterial polysaccharides
- biologically active surface polymers (a review). In Medicinal chemistry into
the millennium (Campbell, M. M., Blagbrough, I. S., eds.) pp. 266-283. Royal Society
of Chemistry, Cambridge, UK.
333. Kooistra, O., Knirel, Y. A., Lüneberg, E., Frosch, M., and Zähringer, U.
(2001) Phase variation in Legionella pneumophila serogroup 1, subgroup OLDA,
strain RC1 influences lipid A structure. In
Legionella, Proc. 5th Intern. Conf. (Marre, R., Abu Kwaik, Y., Bartlett, C.,
Cianciotto, N., Fields, B. S., Frosch, M., Hacker, J., Luck, P. C., eds.) pp.
68-73. American
Society for Microbiology, Washington, DC.
334. Zdorovenko, G.M., Shashkov, A.S., Zdorovenko,
E.L., Kocharova, N.A., Yakovleva, L.M., Knirel, Y.A., Rudolph, K. (2001)
Characterization of the lipopolysaccharide and structure of the O-specific
polysaccharide of the bacterium Pseudomonas syringae pv. atrofaciens
IMV 948. Biokhimiya, 66, 457-466 [In Russian; English translation: Biochemistry
(Moscow), 66, 369-377].
335. Knirel, Y. A., Senchenkova, S. N., Kocharova, N. A., Shashkov, A. S.,
Helbig, J. H., Zähringer, U. (2001) Identification of a homopolymer of
5-acetamidino-7-acetamido-3,5,7,9-tetradeoxy-D-glycero-D-talo-non-2-ulosonic
acid in lipopolysaccharides of Legionella pneumophila non-1 serogroups. Biokhimiya, 66, 1271-1279.
[In Russian; English translation: Biochemistry (Moscow), 66, 1035-1041].
2002
335. Moran, A.P., Knirel, Y.A., Senchenkova, S.N., Widmalm,
G., Hynes, S.O., Jansson, P.-E. (2002) Phenotypic
variation in molecular mimicry between Helicobacter pylori lipopolysaccharides
and human gastric epithelial cell surface glycoforms. Acid-induced phase
variation in Lewis(x) and Lewis(y) expression by H. pylori lipopolysaccharides.
J. Biol. Chem., 277, 5785-5795.
336. Lipinski, T., Zatonsky, G. V., Kocharova, N. A., Jaquinod, M., Forest, E.,
Shashkov, A. S., Gamian, A., Knirel, Y. A.. (2002)
Structures of two O-chain polysaccharides of Citrobacter gillenii O9a,9b lipopolysaccharide. A new homopolymer of 4-amino-4,6-dideoxy-D-mannose (perosamine). Eur. J. Biochem., 269,
93-99.
337. Sidorczyk, Z., Toukach, F. V., Zych, K., Drzewiecka, D., Arbatsky, N. P.
Shashkov, A. S., Knirel, Y. A. (2002) Structural and serological relatedness of
the O-antigens of Proteus penneri 1 and 4 from a novel Proteus serogroup O72.
Eur. J. Biochem., 269, 358-363.
338. Kooistra, O., Lüneberg, E., Knirel, Y. A., Frosch, M., Zähringer, U.
(2002) N-Methylation in polylegionaminic acid is associated with the
phase-variable epitope of Legionella pneumophila serogroup 1
lipopolysaccharide. Eur. J. Biochem., 269, 560-572.
339. Sidorczyk, Z., Zych, K., Toukach, F. V., Arbatsky, N. P., Shashkov, A. S.,
Zablotni, A., Knirel, Y. A. (2002) Structure of the O-polysaccharide and
classification of Proteus mirabilis strain G1 in Proteus serogroup O3. Eur. J.
Biochem., 269, 1406-1412.
340. Bystrova, O.V., Shashkov, A. S., Kocharova, N. A., Knirel, Y. A., Lindner,
B., Zähringer, U., Pier, G. B. (2002) Structural studies on the core and the
O-polysaccharide repeating unit of Pseudomonas aeruginosa immunotype 1
lipopolysaccharide. Eur. J. Biochem., 269, 2194-2203.
341. Toukach, F. V., Kondakova, A. N., Arbatsky, N. P., Senchenkova, S. N.,
Shashkov, A. S., Knirel, Y. A., Zych, K., Rozalski, A., Sidorczyk, Z. (2002)
New structures of the O-specific polysaccharides of bacteria of the genus
Proteus. Part 1. Phosphate-containing polysaccharides. Biokhimiya, 67, 318-331
[In Russian; English translation: Biochemistry (Moscow), 67, 265-276].
342. Kondakova, A. N., Toukach, F. V., Senchenkova, S. N., Arbatsky, N. P.,
Shashkov, A. S., Knirel, Y. A., Zych, K., Torzewska, A., Kolodziejska, K.,
Rozalski, A., Sidorczyk, Z. (2002) New structures of the O-specific polysaccharides
of Proteus. Part 2. O-Acetylated polysaccharides. Biokhimiya, 67, 240-252 [In
Russian; English translation: Biochemistry (Moscow), 67, 201-211].
343. Zdorovenko, E. L., Ovod, V., Zatonsky, G. V., Shashkov, A. S., Kocharova,
N. A., Knirel, Y. A. (2002) Structure of the O-polysaccharide of Pseudomonas
syringae pv. delphinii NCPPB 1879T having
side chains of 3-acetamido-3,6-dideoxy-D-galactose residues. Biokhimiya, 67,
669-678 [In Russian; English translation: Biochemistry (Moscow), 67, 558-565].
344. Vinogradov, E. V., Sidorczyk, Z., Knirel, Y. A. (2002) Structure of the
core part of the lipopolysaccharides from Proteus penneri strains 7, 8, 14, 15,
and 21. Carbohydr. Res., 337, 643-649.
345. Vinogradov, E. V., Lindner, B., Kocharova, N. A., Senchenkova, S. N.,
Shashkov, A. S., Knirel, Y. A., Holst, O., Gremyakova, T. A., Shaikhutdinova,
R. Z., Anisimov, A. P. (2002) The core structure of the lipopolysaccharide from
the causative agent of plague, Yersinia pestis. Carbohydr. Res., 337, 775-777.
346. Knirel, Y. A., Shashkov, A. S., Senchenkova, S. N., Merino, S., Tomas, J.
M. (2002) Structure of the O-polysaccharide of Aeromonas hydrophila
O:34; a case of random O-acetylation of 6-deoxy-L-talose. Carbohydr. Res., 337,
1381-1386.
347. Drzewiecka, D., Toukach, F. V., Arbatsky, N. P., Zych, K., Shashkov, A.
S., Knirel, Y. A., Sidorczyk, Z. (2002) Structure of the O-specific
polysaccharide of the bacterium Proteus penneri 103, containing ribitol and
2-aminoethyl phosphates. Carbohydr. Res., 337, 1535-1540.
348. Katzenellenbogen, E., Zatonsky, G. V., Kocharova, N. A., Bogulska, M.,
Korzeniowska-Kowal, A., Shashkov, A. S., Gamian, A., Knirel, Y. A. (2002)
Structure of a new 2-deoxy-2-[(R)-3-hydroxybutyramido]-D-glucose-containing
O-specific polysaccharide from the lipopolysaccharide of Citrobacter gillenii
PCM 1542. Carbohydr. Res., 337, 1541-1546.
349. Knirel, Y. A., Shashkov, A. S., Senchenkova, S. N., Ajiki, Y., Fukuoka, S.
(2002) Structure of the O-polysaccharide of Pseudomonas putida FERM P-18867. Carbohydr.
Res., 337, 1589-1591.
350. Kocharova, N. A., Zatonsky, G. V., Bystrova, O. V., Ziolkowski, A.,
Wykrota, M., Shashkov, A. S., Knirel, Y. A., Rozalski, A. (2002) Structure of
the O-specific polysaccharide of Providencia alcalifaciens O16 containing
N-acetylmuramic acid. Carbohydr. Res., 337, 1667-1671.
351. Kilcoyne, M., Shashkov, A. S., Senchenkova, S. N., Knirel, Y. A.,
Vinogradov, E. V., Radziejewska-Lebrecht, J., Galimska-Stypa, R., Savage, A. V.
(2002) Structural investigation of the O-specific polysaccharides of Morganella
morganii consisting of two higher sugars. Carbohydr. Res., 337, 1697-1702.
352. Senchenkova, S. N., Huang, X., Laux, P., Knirel, Y. A., Shashkov, A. S.,
Rudolph, K. (2002) Structures of the O-polysaccharide chains of the lipopolysaccharides
of Xanthomonas campestris pv. phaseoli var. fuscans
GSPB 271 and Xanthomonas campestris pv. malvacearum
GSPB 1386 and GSPB 2388. Carbohydr. Res., 337, 1723-1728.
353. Zatonsky, G. V., Kocharova, N. A., Veremeychenko, S. N., Zdorovenko, E. L.,
Shapovalova, V. Y., Shashkov, A. S., Zdorovenko, G. M., Knirel, Y. A. (2002)
Somatic antigens of pseudomonads: structure of the O-specific polysaccharide of
Pseudomonas fluorescens IMV 2366 from (biovar C). Carbohydr. Res., 337,
2365-2370.
354. Perepelov, A. V., Senchenkova, S. N., Shashkov, A. S., Rozalski, A.,
Knirel, Y. A. (2002) Structure of the O-specific polysaccharide of the
bacterium Proteus vulgaris O15 containing a novel regioisomer of
N-acetylmuramic acid. Carbohydr. Res., 337, 2463-2468.
355. Sidorczyk, Z., Toukach, F.V., Zych, K., Arbatsky, N.P., Drzewiecka, D.,
Ziolkowski, A., Shashkov, A.S., Knirel, Y.A. (2002) Structural and serological
characterization of the lipopolysaccharide from Proteus penneri 20 and
classification of the cross-reacting Proteus penneri strains 10, 16, 18, 20, 32
and 45 in Proteus serogroup O17. Arch. Immunol. Ther. Exp. 50, 345-50.
356. Knirel, Y. A., Kocharova, N. A., Bystrova, O. V., Katzenellenbogen, E.,
Gamian, A. (2002) Structures and serology of the O-specific polysaccharides of
bacteria of the genus Citrobacter (a review). Arch. Immunol. Ther. Exp. 50, 379-391.
357. Vinogradov, E., Sidorczyk, Z., Knirel, Y. A. (2002) Structure of the
lipopolysaccharide core region of the bacteria of the genus Proteus (a review).
Aust. J. Chem., 55, 61-67.
358. Knirel, Y. A., Perepelov, A. V. (2002) Trifluoromethanesulfonic acid: a
useful reagent for the solvolytic cleavage of glycosidic linkages in structural
analysis of bacterial polysaccharides (a review). Aust. J. Chem., 55, 69-72.
359. Grozdanov, L., Zähringer, U., Blum-Oehler, G., Brade, L., Henne, A.,
Knirel, Y. A., Schombel, U., Schulze, J., Sonnenborn, U., Gottschalk, G.,
Hacker, J., Rietschel, E. T., Dobrindt, U. (2002) A single nucleotide exchange
in the wzy gene is responsible for the semirough O6 lipopolysaccharide
phenotype and serum sensitivity of Escherichia coli strain Nissle 1917. J.
Bacteriol., 184, 5912-5925.
360. Rozalski, A., Torzewska, A., Bartodziejska, B., Babicka, D., Kwil, I.,
Perepelov, A. V., Kondakova, A. N., Senchenkova, S. N., Knirel, Y. A.,
Vinogradov, E. V. (2002) Chemical structure, antigenic specificity and the role
in the pathogenicity of lipopolysaccharide (LPS, endotoxin) on Proteus vulgaris
bacteria's example. Wiadom. chem., 56, 585-604 [In Polish].
2003
361. Knirel,Y.A., Shashkov,A.S., Tsvetkov,Y.E.,
Jansson,P.-E., Zähringer,U. (2003) 5,7-Diamino-3,5,7,9-tetradeoxynon-2-ulosonic
acids in bacterial glycopolymers: chemistry and biochemistry (a review). Adv.
Carbohydr. Chem. Biochem., 58, 371-417.
362. Gremyakova,T.A., Vinogradov,E.V., Lindner,B., Kocharova,N.A.,
Senchenkova,S.N., Shashkov,A.S., Knirel,Y.A., Holst,O., Shaikhutdinova,R.Z.,
Anisimov,A.P. (2003) The core structure of the lipopolysaccharide of Yersinia
pestis strain KM218. Influence
of growth temperature. Adv. Exp. Med. Biol., 529, 229-232.
363. Färnbäck,M.,
Eriksson,L., Senchenkova,S.N., Zych,K., Knirel,Y.A., Sidorczyk,Z., Widmalm,G.
(2003) Crystal structure of a cyclic enterobacterial common antigen. Angew.
Chem. Int. Ed., 42, 2543-2546.
364. Rozalski,A., Perepelov,A.V., Bartodziejska,B., Senchenkova,S.N.,
Babicka,D., Kaca,W., Knirel,Y.A. (2003) Immunochemical studies on the
O-antigens of Proteus mirabilis O23 and Proteus vulgaris O23. Arch. Immunol. Ther. Exp., 51, 69-73.
365. Kondakova,A.N., Toukach,F.V., Senchenkova,S.N., Arbatsky,N.P.,
Shashkov,A.S., Knirel,Y.A., Bartodziejska,B., Zych,K., Rozalski,A.,
Sidorczyk,Z. (2003) New structures of the O-specific polysaccharides of
Proteus. Part 3. Polysaccharides containing non-sugar organic acids.
Biokhimiya, 68, 548-561 [In Russian; English translation: Biochemistry
(Moscow), 68, 446-457].
366. Bystrova,O.V., Shashkov,A.S., Kocharova,N.A., Knirel,Y.A., Zähringer,U.,
Pier,G.B. (2003) Elucidation of the structure of the lipopolysaccharide core
and the linkage between the core and the O-antigen in Pseudomonas aeruginosa
immunotype 5 using strong alkaline degradation of the lipopolysaccharide.
Biokhimiya, 68, 1119-1128 [In Russian; English translation: Biochemistry
(Moscow), 68, 918-925].
367. Toukach,F.V., Perepelov,A.V., Bartodziejska,B., Shashkov,A.S.,
Blaszczyk,A., Arbatsky,N.P., Rozalski,A., Knirel,Y.A. (2003) Structure of the
O-polysaccharide of Proteus vulgaris O44: a new O-antigen that contains an
amide of D-glucuronic acid with L-alanine. Carbohydr. Res., 338, 1431-1435.
368. Senchenkova,S.N., Knirel,Y.A., Shashkov,A.S.,
Ahmed,M., Mavridis,A., Rudolph,K. (2003) Structure of the O-polysaccharide of
Erwinia carotovora ssp. carotovora GSPB 436. Carbohydr. Res., 338, 2025-2027.
369. Perepelov,A.V., Bartodziejska,B.,
Senchenkova,S.N., Shashkov,A.S., Rozalski,A., Knirel,Y.A. (2003) Structure of
the O-specific polysaccharide of Proteus vulgaris O45 containing
3-acetamido-3,6-dideoxy-D-galactose. Carbohydr. Res., 338, 327-331.
370. Muldoon,J., Perepelov,A.V., Shashkov,A.S., Nazarenko,E.L., Zubkov,V.A.,
Gorshkova,R.P., Ivanova,E.P., Gorshkova,N.M., Knirel,Y.A., Savage,A.V. (2003)
Structure of an acidic polysaccharide from the marine bacterium
Pseudoalteromonas flavipulchra NCIMB 2033T . Carbohydr. Res., 338, 459-462.
371. Kondakova,A.N., Zych,K., Senchenkova,S.N., Sidorczyk,Z., Shashkov,A.S.,
Knirel,Y.A. (2003) Structure of the N-acetyl-L-rhamnosamine-containing
O-polysaccharide of Proteus vulgaris TG 155 from a new Proteus serogroup, O55.
Carbohydr. Res., 338, 1999-2004.
372. Kondakova,A.N., Vinogradov,E.V., Lindner,B., Knirel,Y.A., Amano,K. (2003)
Structural studies on the lipopolysaccharide core of Proteus OX strains used in
Weil-Felix test: a mass spectrometric approach. Carbohydr. Res., 338, 2697-2709.
373. Kondakova,A.N., Fudala,R., Senchenkova,S.N.,
Shashkov,A.S., Knirel,Y.A., Kaca,W. (2003) Structure of the O-specific
polysaccharide of Proteus mirabils O-9. Carbohydr. Res., 338, 1191-1196.
374. Kondakova,A.N., Senchenkova,S.N., Gremyakov,A.I., Shashkov,A.S.,
Knirel,Y.A., Fudala,R., Kaca,W. (2003) Structure of the O-specific
polysaccharide of Proteus mirabilis O38 containing 2-acetamidoethyl phosphate
and N-linked D-aspartic acid . Carbohydr. Res., 338, 2387-2392.
375. Kolodziejska,K., Kondakova,A.N., Zych,K., Senchenkova,S.N., Shashkov,A.S.,
Knirel,Y.A., Sidorczyk,Z. (2003) Structure of the O-polysaccharide of a
serologically separate Proteus mirabilis strain, TG332, from a new proposed
Proteus serogroup O50. Carbohydr. Res., 338, 2105-2109.
376. Kocharova,N.A., Maszewska,A., Zatonsky,G.V., Bystrova,O.V., Ziolkowski,A.,
Torzewska,A., Shashkov,A.S., Knirel,Y.A., Rozalski,A. (2003) Structure of the
O-polysaccharide of Providencia alcalifaciens O21 containing
3-formamido-3,6-dideoxy-D-galactose. Carbohydr. Res., 338, 1425-1430.
377. Kocharova,N.A., Zatonsky,G.V., Torzewska,A., Macieja,Z., Bystrova,O.V.,
Shashkov,A.S., Knirel,Y.A., Rozalski,A. (2003) Structure of the O-specific
polysaccharide of Providencia rustigianii O14 containing Nε-[(S)-1-carboxyethyl]-Nα-(D-galacturonoyl)-L-lysine.
Carbohydr. Res., 338, 1009-1016.
378. Katzenellenbogen,E., Kocharova,N.A.,
Zatonsky,G.V., Bogulska,M., Rybka,J., Gamian,A., Shashkov,A.S., Knirel,Y.A.
(2003) Structure of the O-specific polysaccharide from the lipopolysaccharide
of Citrobacter gillenii O11, strain PCM 1540. Carbohydr. Res., 338, 1381-1387.
379. Katzenellenbogen,E., Kocharova,N.A., Zatonsky,G.V., Korzeniowska-Kowal,A.,
Shashkov,A.S., Knirel,Y.A. (2003) Structure of the O-specific polysaccharide
from the lipopolysaccharide of Hafnia alvei strain PCM 1546. Carbohydr. Res.,
338, 2153-2158.
380. Fudala,R., Kondakova,A.N., Bednarska,K., Senchenkova,S.N., Shashkov,A.S.,
Knirel,Y.A., Zähringer,U., Kaca,W. (2003) Structure and serological
characterization of the O-antigen of Proteus mirabilis O18 with a
phosphocholine-containing oligosaccharide phosphate repeating unit. Carbohydr.
Res., 338, 1835-1842.
381. Bystrova,O.V., Lindner,B., Moll,H., Kocharova,N.A., Knirel,Y.A.,
Zähringer,U., Pier,G.B. (2003) Structure of the biological repeating unit of
the O-antigen of Pseudomonas aeruginosa immunotype 4 containing both
2-acetamido-2,6-dideoxy-D-glucose and 2-acetamido-2,6-dideoxy-D-galactose.
Carbohydr. Res., 338, 1801-1806.
382. Bystrova,O.V., Lindner,B., Moll,H., Kocharova,N.A., Knirel,Y.A.,
Zähringer,U., Pier,G.B. (2003) Structure of the lipopolysaccharide of
Pseudomonas aeruginosa O-12 with a randomly O-acetylated core region.
Carbohydr. Res., 338, 1895-1905.
383. Zdorovenko,E.L., Zatonsky,G.V., Kocharova,N.A., Shashkov,A.S.,
Knirel,Y.A., Ovod,V. (2003) Structures of the O-polysaccharides of two strains
of Pseudomonas syringae pv. porri from genomospecies
4. Eur. J. Biochem., 270, 20-27.
384. Sidorczyk,Z., Kondakova,A.N., Zych,K., Senchenkova,S.N., Shashkov,A.S.,
Drzewiecka,D., Knirel,Y.A. (2003) Structure of the O-polysaccharide of Proteus
myxofaciens. Classification of the bacterium into a new Proteus O-serogroup.
Eur. J. Biochem., 270, 3182-3188.
385. Katzenellenbogen,E., Kocharova,N.A., Zatonsky,G.V., Witkowska,D., Bogulska,M., Shashkov,A.S., Gamian,A.,
Knirel,Y.A. (2003) Structural and serological studies on a new
4-deoxy-D-arabino-hexose-containing O-specific polysaccharide from the
lipopolysaccharide of Citrobacter braakii PCM 1531 (serogroup O6). Eur. J. Biochem.,
270, 2732-2738.
386. Mieszala,M., Lipinski,T., Kocharova,N.A., Zatonsky,G.V.,
Katzenellenbogen,E., Shashkov,A.S., Gamian,A., Knirel,Y.A. (2003) The identity
of the O-specific polysaccharide structure of Citrobacter strains from
serogroups O2, O20 and O25 and immunochemical characterisation of C. youngae
PCM 1507 (O2a,1b) and related strains. FEMS Immunol. Med. Microbiol., 36,
71-76.
387. Kondakova,A.N., Zych,K., Senchenkova,S.N., Bartodziejska,B.,
Shashkov,A.S., Knirel,Y.A., Rozalski,A., Sidorczyk,Z. (2003) Structure of the
O-polysaccharide of Proteus penneri 28 and Proteus vulgaris O31 and
classification of P. penneri 26 and 28 in Proteus serogroup O31. FEMS Immunol.
Med. Microbiol., 39, 87-93.
388. Kondakova,A.N., Zych,K., Senchenkova,S.N., Zablotni,A., Shashkov,A.S.,
Knirel,Y.A., Sidorczyk,Z. (2003) Structure of the O-polysaccharide leads to
classification of Proteus penneri 31 in Proteus serogroup O19. FEMS Immunol.
Med. Microbiol., 39, 73-79.
2004
389. Torzewska,A., Kocharova,N.A., Maszewska,A., Knirel,Y.A.,
Rozalski,A. (2004) Serological characterization of the O-specific
polysaccharide of Providencia alcalifaciens O23. Arch. Immunol. Ther. Exp., 52, 43-49.
390. Perepelov,A.V., Rozalski,A., Bartodziejska,B., Senchenkova,S.N.,
Knirel,Y.A. (2004) Structure of the O-polysaccharide of Proteus mirabilis O19
and reclassification of certain Proteus strains that were formerly classified
in serogroup O19. Arch. Immunol. Ther. Exp., 52, 188-196.
391. Kondakova,A.N., Lindner,B., Fudala,R., Senchenkova,S.N., Moll,H.,
Shashkov,A.S., Kaca,W., Zähringer,U., Knirel,Y.A. (2004) New stuctures of the
O-specific polysaccharides of Proteus. Part 4. Polysaccharides containing
unusual acidic N-acyl derivatives of 4-amino-4,6-dideoxy-D-glucose.
Biokhimiya, 69, 1271-1282 [In Russian; English translation: Biochemistry
(Moscow), 69, 1034-1043].
392. Kocharova,N.A., Senchenkova,S.N., Kondakova,A.N., Gremyakov,A.I.,
Zatonsky,G.V., Shashkov,A.S., Knirel,Y.A., Kochetkov,N.K. (2004) D- and
L-Aspartic acids: new non-sugar components of bacterial polysaccharides.
Biokhimiya, 69, 128-133 [In Russian; English translation: Biochemistry
(Moscow), 69, 103-107.
393. Bystrova,O.V., Lindner,B., Moll,H., Kocharova,N.A., Shashkov,A.S.,
Knirel,Y.A., Zähringer,U., Pier,G.B. (2004) Full structure of the
lipopolysaccharide of Pseudomonas aeruginosa immunotype 5. Biokhimiya, 69,
201-211 [In Russian; English translation: Biochemistry (Moscow), 69, 170-175].
394. Zatonsky,G.V., Zdorovenko,E.L., Ovod,V.,
Shashkov,A.S., Knirel,Y.A. (2004) The O-polysaccharide of Pseudomonas syringae
pv. mori NCPPB 1656 is a β-(1-->2)-linked
homopolymer of L-rhamnose. Carbohydr. Res., 339, 733-735.
395. Senchenkova,S.N., Shashkov,A.S., Knirel,Y.A.,
Wydra,K., Witt,F., Mavridis,A., Rudolph,K. (2004) Structure of the O-polysaccharide
of Xanthomonas cassavae GSPB 2437. Carbohydr. Res., 339, 157-160.
396. Senchenkova,S.N., Perepelov,A.V., Cedzynski,M., Swierzko,A.S.,
Ziolkowski,A., Shashkov,A.S., Kaca,W., Knirel,Y.A., Jansson,P.-E. (2004)
Structure of a highly phosphorylated O-polysaccharide of Proteus mirabilis O41.
Carbohydr. Res., 339, 1347-1352.
397. Perepelov,A.V., Kolodziejska,K., Kondakova,A.N.,
Wykrota,M., Knirel,Y.A., Sidorczyk,Z., Rozalski,A. (2004) Structure of the
O-polysaccharide of Proteus serogroup O34 containing 2-acetamido-2-deoxy-α-D-galactosyl
phosphate. Carbohydr. Res., 339, 2145-2149.
398. Perepelov,A.V., Zablotni,A., Zych,K., Senchenkova,S.N., Shashkov,A.S.,
Knirel,Y.A., Sidorczyk,Z. (2004) Structure of the O-polysaccharide of Proteus
mirabilis CCUG 10701 (OB) classified into a new Proteus serogroup, O74.
Carbohydr. Res., 339, 1395-1398.
499. Ovchinnikova,O.G., Kocharova,N.A.,
Katzenellenbogen,E., Zatonsky,G.V., Shashkov,A.S., Knirel,Y.A., Lipinski,T.,
Gamian,A. (2004) Structures of two O-polysaccharides of the lipopolysaccharide
of Citrobacter youngae PCM 1538 (serogroup O9). Carbohydr. Res., 339, 881-884.
400. Ovchinnikova,O.G., Kocharova,N.A.,
Bakinovskiy,L.V., Torzewska,A., Shashkov,A.S., Knirel,Y.A., Rozalski,A. (2004)
The structure of the O-polysaccharide from the lipopolysaccharide of
Providencia stuartii O47. Carbohydr. Res., 339, 2621-2626.
401. Kondakova,A.N., Fudala,R., Bednarska,K., Senchenkova,S.N., Knirel,Y.A.,
Kaca,W. (2004) Structure of the neutral O-polysaccharide and biological
activities of the lipopolysaccharide of Proteus mirabilis O20. Carbohydr. Res.,
339, 623-628.
402. Kocharova,N.A., Torzewska,A., Zatonsky,G.V., Blaszczyk,A., Bystrova,O.V.,
Shashkov,A.S., Knirel,Y.A., Rozalski,A. (2004) Structure of the
O-polysaccharide of Providencia stuartii O4 containing
4-(N-acetyl-L-aspart-4-yl)amino-4,6-dideoxy-D-glucose. Carbohydr. Res., 339,
195-200.
403. Kocharova,N.A., Maszewska,A., Zatonsky,G.V., Torzewska,A., Bystrova,O.V.,
Shashkov,A.S., Knirel,Y.A., Rozalski,A. (2004) Structure of the O-polysaccharide
of Providencia alcalifaciens O19. Carbohydr. Res., 339, 415-419.
404. Kocharova,N.A., Mieszala,M., Zatonsky,G.V.,
Staniszewska,M., Shashkov,A.S., Gamian,A., Knirel,Y.A. (2004) Structure of the
O-polysaccharide of Citrobacter youngae O1 containing an α-D-ribofuranosyl
group. Carbohydr. Res., 339, 321-325.
405. Kocharova,N.A., Blaszczyk,A., Zatonsky,G.V., Torzewska,A., Bystrova,O.V.,
Shashkov,A.S., Knirel,Y.A., Rozalski,A. (2004) Structure and cross-reactivity
of the O-antigen of Providencia stuartii O18 containing
3-acetamido-3,6-dideoxy-D-glucose. Carbohydr. Res., 339, 409-413.
406. Knirel,Y.A., Vinogradov,E.V., Jimenez,N.,
Merino,S., Tomas,J.M. (2004) Structural studies on the R-type
lipopolysaccharide of Aeromonas hydrophila. Carbohydr. Res., 339, 787-793.
407. Kilcoyne,M., Perepelov,A.V., Tomshich,S.V., Komandrova,N.A.,
Shashkov,A.S., Romanenko,L.A., Knirel,Y.A., Savage,A.V. (2004) Structure of the
O-polysaccharide of Idiomarina zobellii KMM 231T containing two unusual amino
sugars with the free amino group, 4-amino-4,6-dideoxy-D-glucose and
2-amino-2-deoxy-L-guluronic acid. Carbohydr. Res., 339, 477-482.
408. Katzenellenbogen,E., Kocharova,N.A., Bogulska,M.,
Shashkov,A.S., Knirel,Y.A. (2004) Structure of the O-polysaccharide from the
lipopolysaccharide of Hafnia alvei strain PCM 1529. Carbohydr. Res., 339,
723-727.
409. Fedonenko,Y.P., Konnova,O.N., Zatonsky,G.V., Shashkov,A.S., Konnova,S.A.,
Zdorovenko,E.L., Ignatov,V.V., Knirel,Y.A. (2004) Structure of the
O-polysaccharide of the lipopolysaccharide of Azospirillum irakense KBC1.
Carbohydr. Res., 339, 1813-1816.
410. Bushmarinov,I.S., Ovchinnikova,O.G., Kocharova,N.A., Blaszczyk,A.,
Toukach,F.V., Torzewska,A., Shashkov,A.S., Knirel,Y.A., Rozalski,A. (2004)
Structure of the O-polysaccharide of Providencia stuartii O49. Carbohydr. Res.,
339, 1557-1560.
411. Zdorovenko,E.L., Vinogradov,E.V., Zdorovenko,G.M., Lindner,B.,
Bystrova,O.V., Shashkov,A.S., Rudolph,K., Zähringer,U., Knirel,Y.A. (2004)
Structure of the core oligosaccharide of a rough-type lipopolysaccharide of
Pseudomonas syringae pv. phaseolicola. Eur. J.
Biochem., 271, 4968-4977. Corrigendum in: FEBS J., 272, 1815 (2005).
412. Torzewska,A., Kocharova,N.A., Zatonsky,G.V., Blaszczyk,A., Bystrova,O.V.,
Shashkov,A.S., Knirel,Y.A., Rozalski,A. (2004) Structure of the
O-polysaccharide and serological cross-reactivity of the Providencia stuartii
O33 lipopolysaccharide containing 4-(
N-acetyl-D-aspart-4-yl)amino-4,6-dideoxy-D-glucose. FEMS Immunol. Med.
Microbiol., 41, 133-139.
413. Moran,A.P., Shiberu,B., Ferris,J.A., Knirel,Y.A., Senchenkova,S.N.,
Perepelov,A.V., Jansson,P.-E., Goldberg,J.B. (2004) Role of Helicobacter pylori
rfaJ genes (HP0159 and HP1416) in lipopolysaccharide synthesis. FEMS Microbiol.
Lett., 241, 57-65.
414. Feng,L., Senchenkova,S.N., Yang,J., Shashkov,A.S., Tao,J., Guo,H.,
Zhao,G., Knirel,Y.A., Reeves,P., Wang,L. (2004) Structural and genetic
characterization of the Shigella boydii type 13 O-antigen. J. Bacteriol., 186,
383-392.
415. Feng,L., Senchenkova,S.N., Yang,J., Shashkov,A.S., Tao,J., Guo,H.,
Cheng,J., Ren,Y., Knirel,Y.A., Reeves,P., Wang,L. (2004) Synthesis of the
heteropolysaccharide O-antigen of Escherichia coli O52 requires an ABC
transporter: Structural and genetic evidences. J. Bacteriol., 186, 4510-4519.
416. Zähringer,U., Lindner,B., Knirel,Y.A., Van den Akker,W.M.R., Hiestand,R.,
Heine,H., Dehio,C. (2004) Structure and biological activity of the short-chain
lipopolysaccharide from Bartonella henselae ATCC49882T. J. Biol. Chem., 279,
21046-21054.
417. Ovod,V., Zdorovenko,E.L., Shashkov,A.S.,
Kocharova,N.A., Knirel,Y.A. (2004) Structural diversity of O-polysaccharides
and serological classification of Pseudomonas syringae pv. garcae
and other strains of genomospecies 4. Mikrobiologiya, 73, 777-789 [In Russian;
English translation: Microbiology, 73, 666-677].
2005
418. Knirel,Y.A., Lindner,B., Vinogradov,E.V., Kocharova,N.A.,
Senchenkova,S.N., Shaikhutdinova,R.Z., Dentovskaya,S.V., Fursova,N.K.,
Bakhteeva,I.V., Titareva,G.M., Balakhonov,S.V., Holst,O., Gremiakova,T.A.,
Pier,G.B., Anisimov,A.P. (2005) Temperature-dependent variations and
intraspecies diversity of the structure of the lipopolysaccharide of Yersinia
pestis. Biochemistry, 44, 1731-1743.
419. Katzenellenbogen,E., Kocharova,N.A., Zatonsky,G.V., Shashkov,A.S.,
Knirel,Y.A., Gamian,A., Bogulska,M. (2005) Structure of the O-polysaccharide of
Hafnia alvei strain PCM 1189 that has hexa- to octa-saccharide repeating units
owing to incomplete glucosylation. Carbohydr. Res., 340, 263-270.
420. Kocharova,N.A., Ovchinnikova,O.G., Bushmarinov,I.S., Toukach,F.V.,
Torzewska,A., Shashkov,A.S., Knirel,Y.A., Rozalski,A. (2005) The structure of
the O-polysaccharide from the lipopolysaccharide of Providencia stuartii O57
containing an amide of D-galacturonic acid with L-alanine. Carbohydr. Res.,
340, 775-780.
421. Ovchinnikova,O.G., Kocharova,N.A., Torzewska,A.,
Blaszczyk,A., Shashkov,A.S., Knirel,Y.A., Rozalski,A. (2005) The structure of
the O-polysaccharide from the lipopolysaccharide of Providencia stuartii O43
containing an amide of D-galacturonic acid with L-serine. Carbohydr. Res., 340,
1407-1411.
422. Kocharova,N.A., Bushmarinov,I.S., Ovchinnikova,O.G., Toukach,F.V.,
Torzewska,A., Shashkov,A.S., Knirel,Y.A., Rozalski,A. (2005) The structure of
the O-polysaccharide from the lipopolysaccharide of Providencia stuartii O44
containing L-quinovose, a 6-deoxy sugar rarely occurring in bacterial
polysacharides. Carbohydr. Res., 340, 1419-1423.
423. Kondakova,A.N., Fudala,R., Senchenkova,S.N., Shashkov,A.S., Knirel,Y.A.,
Kaca,W. (2005) Structure of a lactic acid ether-containing and glycerol
phosphate-containing O-polysaccharide from Proteus mirabilis O40. Carbohydr.
Res., 340, 1612-1617.
424. Knirel,Y.A., Lindner,B., Vinogradov,E.V., Shaikhutdinova,R.Z.,
Senchenkova,S.N., Kocharova,N.A., Holst,O., Pier,G.B., Anisimov,A.P. (2005)
Cold temperature-induced modifications to the composition and structure of the
lipopolysaccharide of Yersinia pestis. Carbohydr. Res., 340, 1625-1630.
425. Kiessling,P., Senchenkova,S.N., Ramm,M.,
Knirel,Y.A. (2005) Structural studies on the exopolysaccharide from Erwinia
persicina. Carbohydr. Res., 340, 1761-1765.
426. Zablotni,A., Perepelov,A.V., Knirel,Y.A.,
Sidorczyk,Z. (2005) Structure of the O-polysaccharide of Proteus mirabilis OC
(CCUG 10702) from a new proposed Proteus serogroup O75. Carbohydr. Res., 340,
1908-1913.
427. Kilcoyne,M., Shashkov,A.S., Knirel,Y.A., Gorshkova,R.P., Nazarenko,E.L.,
Ivanova,E.P., Gorshkova,N.M., Senchenkova,S.N., Savage,A.V. (2005) The
structure of the O-polysaccharide of the Pseudoalteromonas rubra ATCC 29570T
lipopolysaccharide containing a keto sugar. Carbohydr. Res., 340, 2369-2375.
428. Perepelov,A.V., Zablotni,A., Shashkov,A.S.,
Knirel,Y.A., Sidorczyk,Z. (2005) Structure of the O-polysaccharide and
serological studies of the lipopolysaccharide of Proteus mirabilis 2002. Carbohydr.
Res., 340, 2305-2310.
429. Zych,K., Perepelov,A.V., Siwinska,M.,
Knirel,Y.A., Sidorczyk,Z. (2005) Structures of the O-polysaccharides and
classification of Proteus genomospecies 4, 5 and 6 into respective Proteus
serogroups. FEBS J., 272, 5536-5543.
430. Zych,K., Perepelov,A.V., Baranowska,A., Zablotni,A., Knirel,Y.A.,
Sidorczyk,Z. (2005) Structure and serological studies of the O-polysaccharide
of Proteus penneri 75. Epitopes and subgroups of Proteus serogroup O73. FEMS
Immunol. Med. Microbiol., 43, 141-148.
431. Zych,K., Perepelov,A.V., Baranowska,A.,
Zablotni,A., Shashkov,A.S., Knirel,Y.A., Sidorczyk,Z. (2005) Structure of the
O-polysaccharide and serological studies of the lipopolysaccharide of Proteus
penneri 60 classified into a new Proteus serogroup O70. FEMS Immunol. Med.
Microbiol., 43, 351-356.
432. Katzenellenbogen,E., Kocharova,N.A.,
Zatonsky,G.V., Shashkov,A.S., Bogulska,M., Knirel,Y.A. (2005) Structures of the
biological repeating units in the O-chain polysaccharides of Hafnia alvei strains
having a typical lipopolysaccharide outer core region. FEMS Immunol. Med.
Microbiol., 45, 269-278.
433. Senchenkova,S.N., Shashkov,A.S., Knirel,Y.A.,
Ahmed,M., Mavridis,A., Rudolph,K. (2005) Structure of the O-polysaccharide of
Erwinia carotovora ssp. atroseptica GSPB 9205, containing a new higher branched
monosaccharide. Izv. AN. Ser. Khim., 1239-1244 [In Russian; English
translation: Russ. Chem. Bull., 54, 1276-1281].
434. Senchenkova,S.N., Feng,L., Yang,J., Shashkov,A.S., Cheng,J., Liu,D.,
Knirel,Y.A., Reeves,P., Jin,Q., Ye,Q., Wang,L. (2005) Structural and genetic
characterization of the Shigella boydii type 10 and 6 O antigens. J.
Bacteriol., 187, 2551-2554.
435. Feng,L., Senchenkova,S.N., Tao,J., Shashkov,A.S., Liu,B., Shevelev,S.D.,
Reeves,P., Xu,J., Knirel,Y.A., Wang,L. (2005) Structural and genetic
characterization of enterohaemorrhagic Escherichia coli O145 O antigen and
development of an O145 serogroup-specific PCR assay. J. Bacteriol., 187,
758-764.
436. Kondakova,A.N., Vinogradov,E.V., Knirel,Y.A., Lindner,B. (2005)
Application of electrospray ionization with Fourier transform ion cyclotron
resonance mass spectrometry for structural screening of core oligosaccharides
from lipopolysaccharides of the bacteria Proteus. Rapid Commun. Mass Spectrom., 19, 2343-2349.
437. Feng,L., Senchenkova,S.N., Wang,W., Shashkov,A.S., Liu,B., Shevelev,S.D.,
Liu,D., Knirel,Y.A., Wang,L. (2005) Structural and genetic characterization of
the Shigella boydii type 18 O antigen. Gene, 355, 79-86.
438. Anisimov,A.P., Dentovskaya,S.V., Titareva,G.M., Bakhteeva,I.V.,
Shaikhutdinova,R.Z., Balakhonov,S.V., Lindner,B., Kocharova,N.A.,
Senchenkova,S.N., Holst,O., Pier,G.B., Knirel,Y.A. (2005) Intraspecies and
temperature-dependent variations in susceptibility of Yersinia pestis to
bactericidal action of serum and polymyxin B. Infect. Immun., 73, 7324-7331.
2006
439. Varbanets,L.D., Zdorovenko,G.M., Knirel,Y.A.
(2006) Methods of endotoxin investigations (Podgorskii,V.S., ed.). Kiev:
Naukova dumka [in Russian].
440. Dentovskaya,S.V., Shaikhutdinova,R.Z.,
Knirel,Y.A., Ivanov, S.I., Anisimov,A.P. (2006) Generation of vaccine strains
of Gram-negative bacteria with reduced adverse reactogenicity. Mol. Genet.
Mikrobiol. Virusol., No. 2, 3-8 [in Russian; English
translation: Mol. Gen. Microbiol. Virol., No. 2,
49-55].
441. Kocharova,N.A., Ovchinnikova,O.G., Torzewska,A.,
Shashkov,A.S., Knirel,Y.A., Rozalski,A. (2006) The structure of the
O-polysaccharide from the lipopolysaccharide of Providencia alcalifaciens O30.
Carbohydr. Res., 341, 786-790.
442. Bushmarinov,I.S., Ovchinnikova,O.G., Kocharova,N.A., Toukach,F.V.,
Torzewska,A., Shashkov,A.S., Knirel,Y.A., Rozalski,A. (2006) Structure of the
O-polysaccharide from the lipopolysaccharide of Providencia alcalifaciens O29.
Carbohydr. Res., 341, 1181-1185.
443. Perepelov,A.V., Zablotni,A., Shashkov,A.S.,
Knirel,Y.A., Sidorczyk,Z. (2006) Structure of the O-polysaccharide of Proteus
mirabilis CCUG 10705 (OF) containing an amide of D-galacturonic acid with
L-alanine. Carbohydr. Res., 341, 1969-1974.
444. Perepelov,A.V., Wang,Q., Senchenkova,S.N., Shevelev,S.D., Zhao,G.,
Shashkov,A.S., Feng,L., Knirel,Y.A., Wang,L. (2006) Structure of a glycerol
teichoic-acid like O-specific polysaccharide of Escherichia coli O29.
Carbohydr. Res., 341, 2176-2180.
445. Kondakova,A.N., Vinogradov,E.V., Lindner,B.,
Kocharova,N.A., Rozalski,A., Knirel,Y.A. (2006) Elucidation of the
lipopolysaccharide core structures of bacteria of the genus Providencia. J.
Carbohydr. Chem., 25, 499-520.
446. Bystrova,O.V., Knirel,Y.A., Lindner,B., Kocharova,N.A., Kondakova,N.A.,
Zähringer,U., Pier,G.B. (2006) Structures of the core oligosaccharide and
O-units in the R- and SR-type lipopolysaccharides of reference strains of
Pseudomonas aeruginosa. FEMS Immunol. Med. Microbiol., 46, 85-99.
447. Kolodziejska,K., Perepelov,A.V., Zablotni,A., Drzewiecka,D.,
Senchenkova,S.N., Zych,K., Shashkov,A.S., Knirel,Y.A., Sidorczyk,Z. (2006)
Structure of the glycerol phosphate-containing O-polysaccharides and
serological studies of the lipopolysaccharides of Proteus mirabilis CCUG 10704
(OE) and Proteus vulgaris TG 103 classified into a new Proteus serogroup, O54.
FEMS Immunol. Med. Microbiol., 47, 267-274.
448. Liu,B., Senchenkova,S.N., Feng,L., Perepelov,A.V., Xu,T., Shevelev,S.D.,
Zhu,Y., Shashkov,A.S., Zou,M., Knirel,Y.A., Wang,L. (2006) Structural and
molecular characterization of Shigella boydii type 16 O antigen. Gene, 380,
46-53.
449. Senchenkova,S.N., Feng,L., Wang,Q., Perepelov,A.V., Qin,D., Shevelev,S.D.,
Wang,M., Shashkov,A.S., Knirel,Y.A., Wang,L. (2006) Structural and genetic
characterization of Shigella boydii type 17 O antigen and confirmation of two
new genes involved in the synthesis of glucolactilic acid. Biochem. Biophys.
Res. Commun., 349, 289-295.
450. Knirel,Y.A., Dentovskaya,S.V., Senchenkova,S.N., Shaikhutdinova,R.Z.,
Kocharova,N.A., Anisimov,A.P. (2006) Structural features and structural
variability of the lipopolysaccharide of Yersinia pestis, the cause of plague
(a review) J. Endotoxin Res., 12, 3-9.
451. Knirel,Y.A., Bystrova,O.V., Kocharova,N.A., Zähringer,U., Pier,G.B. (2006)
Conserved and variable structural features in the lipopolysaccharide of
Pseudomonas aeruginosa (a review). J. Endotoxin Res., 12, 324-336. Corrigendum
in: Innate Immun., 16, 274 (2010).
452. Torzewska,A., Grabowski,S., Kondakova,A.N., Toukach,F.V.,
Senchenkova,S.N., Shashkov,A.S., Arbatsky,N.P., Knirel,Y.A., Rozalski,A.,
Kaca,W. (2006) Structures and serology of the O-antigens of Proteus strains
classified into serogroup O17 and former serogroup O35. Arch. Immunol. Ther.
Exp., 54, 277-282.
453. Zablotni,A., Perepelov,A.V., Kolodziejska,K., Zych,K., Knirel,Y.A.,
Sidorczyk,Z. (2006) Classification of Proteus mirabilis TG 115 and CCUG 10701
into the Proteus O23 serogroup based on chemical and serological studies of
O-polysaccharides. Arch. Immunol. Ther. Exp., 54, 411-417.
454. Komarova,B.S., Tsvetkov,Y.E., Knirel,Y.A.,
Zähringer,U., Pier,G.B., Nifantiev,N.E. (2006) Synthesis of a common
trisaccharide fragment of glycoforms of the outer core region of the Pseudomonas
aeruginosa lipopolysaccharide. Tetrahedron Lett., 47,
3583-3587.
455. Toukach,F.V., Bushmarinov,I.S., Knirel,Y.A.
(2006) New electronic database on bacterial carbohydrates (BCSDB). Vestnik
MITKhT, 1, 59-66 [in Russian].
2007
456. Perepelov,A.V., Liu,B., Senchenkova,S.N., Shevelev,S.D., Wang,W.,
Shashkov,A.S., Feng,L., Wang,L., Knirel,Y.A. (2007) Structure of a glycerol
phosphate-containing O-antigenic polysaccharide of Escherichia coli O130.
Bioorg. Khim., 33, 64-68 [In Russian; English
translation: Russ. J. Bioorg. Chem., 33, 57-60].
457. Bushmarinov,I.S., Ovchinnikova,O.G., Kocharova,N.A., Toukach,F.V.,
Torzewska,A., Shashkov,A.S., Knirel,Y.A., Rozalski,A. (2007) Structure of the
O-polysaccharide and serological cross-reactivity of the lipopolysaccharide of
Providencia alcalifaciens O32 containing N-acetylisomuramic acid. Carbohydr.
Res., 342, 268-273.
458. Perepelov,A.V., Han,W., Senchenkova,S.N., Shevelev,S.D., Shashkov,A.S.,
Feng,L., Liu,Y., Knirel,Y.A., Wang,L. (2007) Structure of the O-polysaccharide
of Escherichia coli O150 containing
2-acetamido-4-O-[(S)-1-carboxyethyl]-2-deoxy-D-glucose. Carbohydr. Res., 342,
648-652.
459. Shashkov,A.S., Kocharova,N.A., Zatonsky,G.V., Blaszczyk,A., Knirel,Y.A.,
Rozalski,A. (2007) Structure of the O-antigen of Providencia stuartii O20, a
new polysaccharide containing
5,7-diacetamido-3,5,7,9-tetradeoxy-L-glycero-D-galacto-non-2-ulosonic acid.
Carbohydr. Res., 342, 653-658.
460. Kocharova,N.A., Ovchinnikova,O.G., Torzewska,A.,
Shashkov,A.S., Knirel,Y.A., Rozalski,A. (2007) The structure of the
O-polysaccharide from the lipopolysaccharide of Providencia alcalifaciens O36
containing 3-deoxy-D-manno-oct-2-ulosonic acid. Carbohydr. Res., 342, 665-670.
461. Ovchinnikova,O.G., Bushmarinov,I.S.,
Kocharova,N.A., Toukach,F.V., Wykrota,M., Shashkov,A.S., Knirel,Y.A.,
Rozalski,A. New structure for the O-polysaccharide of Providencia alcalifaciens
O27 and revised structure for the O-polysaccharide of Providencia stuartii O43.
Carbohydr. Res., 342, 1116-1121.
462. Zhao,G., Perepelov,A.V., Senchenkova,S.N., Shashkov,A.S., Feng,L., Li,X.,
Knirel,Y.A., Wang,L. Structural relation of the antigenic polysaccharides of
Escherichia coli O40, Shigella dysenteriae type 9, and E. coli K47. Carbohydr.
Res., 342, 1275-1279.
463. Ovchinnikova,O.G., Kocharova,N.A., Wykrota,M.,
Knirel,Y.A., Rozalski,A. Structure of a colitose-containing O-polysaccharide
from the lipopolysaccharide of Providencia alcalifaciens O6. Carbohydr. Res.,
342, 2144-2148.
464. Arbatsky,N.P., Kondakova,A.N., Senchenkova,S.N., Siwinska,M.,
Shashkov,A.S., Zych,K., Knirel,Y.A., Sidorczyk,Z. Structure of a new ribitol
teichoic acid-like polysaccharide of a serologically separate Proteus vulgaris
strain, TG 276-1, classified into a new Proteus serogroup O53. Carbohydr. Res.,
342, 2061-2066.
465. Perepelov,A.V., Liu,B., Senchenkova,S.N., Shashkov,A.S., Feng,L.,
Knirel,Y.A., Wang,L. (2007) Close relation of the O-polysaccharide structure of
Escherichia coli O168 and revised structure of the O-polysaccharide of Shigella
dysenteriae type 4. Carbohydr. Res., 342, 2676-2681.
466. Perepelov,A.V., B. Bartodziejska, Shashkov,A.S.,
Wykrota,M., Knirel,Y.A., Rozalski,A. (2007) Structure of a glucosyl
phosphate-containing O-polysaccharide of Proteus vulgaris O42. Carbohydr. Res.,
342, 2826-2831
467. Kondakova,A.N., Vinogradov,E.V., Lindner,B., Kocharova,N.A., Rozalski,A.,
Knirel,Y.A. (2007) Mass-spectrometric studies of Providencia SR-form
lipopolysaccharides and elucidation of the biological repeating unit structure
of Providencia rustigianii O14-polysaccharide. J. Carbohydr. Chem., 26, 497-512
468. Wang,Y., Xu,Y., Perepelov,A.V., Qi,Y., Knirel,Y.A., Wang,L., Feng,L.
(2007) Biochemical characterization of dTDP-D-Qui4N and dTDP-D-Qui4NAc
biosynthetic pathways in Shigella dysenteriae type 7 and Escherichia coli O7.
J. Bacteriol., 189, 8626-8635.
469. Anisimov,A.P., Shaikhutdinova,R.Z., Pan'kina,L.N., Feodorova,V.A.,
Savostina,E.P., Bystrova,O.V., Lindner,B., Mokrievich,A.N., Bakhteeva,I.V.,
Titareva,G.M., Dentovskaya,S.V., Kocharova,N.A., Senchenkova,S.N., Holst,O.,
Devdariani,Z.L., Popov,Y.A., Pier,G.B., Knirel,Y.A. (2007) Effect of deletion
of the lpxM gene on virulence and vaccine potential of Yersinia pestis in mice.
J. Med. Microbiol., 56, 443-453.
470. Feodorova V.A., Pan'kina L.N., Savostina E.P., Sayapina L.V., Motin V.L.,
Dentovskaya S.V., Shaikhutdinova R.Z., Ivanov S.A., Kondakova A.N., Bystrova
O.V., Kocharova N.A., Senchenkova S.N., Holst O., Pier G.B., Knirel Y.A.,
Anisimov A.P. (2007) A Yersinia pestis lpxM-mutant live vaccine induces
enhanced immunity against bubonic plague in mice and guinea pigs. Vaccine, 25,
7620-7628.
471. Feng,L., Perepelov,A.V., Zhao,G., Shevelev,S.D., Wang,Q.,
Senchenkova,S.N., Shashkov,A.S., Geng,Y., Reeves,P.R., Knirel,Y.A., Wang,L.
(2007) Structural and genetic evidence that the Escherichia coli O148 O antigen
is the precursor of the Shigella dysenteriae type 1 O antigen and
identification of a glucosyltransferase gene. Microbiology, 153, 139-147.
472. Wang,W., Perepelov,A.V., Feng,L., Shevelev,S.D., Wang,Q.,
Senchenkova,S.N., Han,W., Li,Y., Shashkov,A.S., Knirel,Y.A., Reeves,P.R.,
Wang,L. (2007) A group of Escherichia coli and Salmonella enterica O antigens
sharing a common backbone structure. Microbiology, 153, 2159-2167.
473. Vilches,S., Canals,R., Wilhelms,M., Sato,M.T., Knirel,Y.A., Vinogradov,E.,
Merino,S., Tomas,J.M. (2007) Mesophilic Aeromonas UDP-glucose pyrophosphorylase
(GalU) mutants show two types of lipopolysaccharide structures and reduced
virulence. Microbiology, 153, 2393-2404.
474. Zych,K., Kolodziejska,K., Drzewiecka,D., Perepelov,A.V., Knirel,Y.A.,
Sidorczyk,Z. (2007) Serological classification and epitope specificity of
Proteus vulgaris TG 251 from Proteus serogroups O65. Arch. Immunol. Ther. Exp.,
55, 187-191.
475. Zablotni,A., Zych,K., Kondakova,A.N., Siwinska,M., Knirel,Y.A.,
Sidorczyk,Z. (2007) Serological and structural characterization of the
O-antigen of the unclassified Proteus mirabilis strains TG83, TG319, and CCUG
10700 (OA). Arch. Immunol. Ther. Exp., 55, 347-352.
476. Toukach,P., Joshi,H.J., Ranzinger,R., Knirel,Y.,
von der Lieth,C.-W. (2007) Sharing of worldwide distributed
carbohydrate-related digital resources: online connection of the Bacterial
Carbohydrate Structure DataBase and GLYCOSCIENCES.de. Nucleic Acids Res., 35,
D280-D286.
477. Knirel,Y.A., Dentovskaya,S.V., Bystrova,O.V., Kocharova,N.A.,
Senchenkova,S.N., Shaikhutdinova,R.Z., Titareva,G.M., Bakhteeva,I.V.,
Lindner,B., Pier,G.B., Anisimov,A.P. (2007) Relationship of the
lipopolysaccharide structure of Yersinia pestis to resistance to antimicrobial
factors. Adv. Exp. Med. Biol., 603, 88-96; Proc. 9th Int. Symp. on Yersinia, October 10-14, 2006, Lexington, Kentucky, USA.
In The genus Yersinia: From genomics to function (R.D. Perry, J.D. Fetherston, eds.) Elsevier.
2008
478. Knirel,Y.A., Kondakova,A.N., Bystrova,O.V., Lindner,B.,
Shaikhutdinova,R.Z., Dentovskaya,S.V., Anisimov,A.P. (2008) New features of
Yersinia lipopolysaccharide structures as revealed by high-resolution
electrospray ionization mass spectrometry. Adv. Sci. Lett., 1, 192-198.
479. Dentovskaya,S.V., Bakhteeva,I.V., Titareva,G.M., Shaikhutdinova,R.Z.,
Kondakova,A.N., Bystrova,O.V., Lindner,B., Knirel,Y.A., Anisimov,A.P. (2008)
Structural diversity and endotoxic activity of the lipopolysaccharide of
Yersinia pestis. Biokhimiya, 73, 237-246 [In Russian; English translation:
Biochemistry (Moscow), 73, 192-199].
480. Perepelov A.V., Wang Q., Senchenkova S.N., Shevelev S.D., Shashkov A.S.,
Feng L., Knirel Y.A., Wang L. (2008) Structure and characterization of the gene
cluster of the O-antigen of Escherichia coli O49 containing
4,6-dideoxy-4-[(S)-3-hydroxybutanoylamino]-D-glucose. Biokhimiya, 73, 498-503
[In Russian; English translation: Biochemistry (Moscow), 73, 406-410].
481. Perepelov,A.V., Senchenkova,S.N., Shashkov,A.S., Liu,B., Feng,L., Wang,L.,
Knirel,Y.A. (2008) Antigenic polysaccharides of bacteria. 40. The structures of
O-specific polysaccharides from Shigella dysenteriae types 3 and 9 and Shigella
boydii type 4 revised by NMR spectoscopy. Bioorg. Khim.,
34, 121-128 [In Russian; English translation: Russ. J. Bioorg. Chem., 34,
110-117].
482. Perepelov,A.V., Senchenkova,S.N., Shashkov,A.S., Knirel,Y.A., Liu,B.,
Feng,L., Wang,L. (2008) Antigenic polysaccharides of bacteria. 41. Structures
of the O-specific polysaccharides of Shigella dysenteriae types 4 and 5 revised by NMR spectroscopy. Bioorg. Khim., 34, 513-521 [In Russian; English translation: Russ.
J. Bioorg. Chem., 34, 460-467].
483. Perepelov,A.V., Senchenkova,S.N., Shashkov,A.S., Knirel,Y.A., Liu,B., Feng,L.,
Wang,L. (2008) Antigenic polysaccharides of bacteria. 42. Structures of
O-polysaccharides from two Shigella dysenteriae type 8
strains. Bioorg. Khim., 34, 808-812 [In Russian;
English translation: Russ. J. Bioorg. Chem., 34, 725-729].
484. Perepelov,A.V., Liu,B., Senchenkova,S.N., Shashkov,A.S., Feng,L.,
Knirel,Y.A., Wang,L. (2008) Structure of the O-polysaccharide of Escherichia
coli O112ab containing L-iduronic acid. Carbohydr. Res., 343, 571-575.
485. Fedonenko,Y.P., Konnova,O.N., Zdorovenko,E.L., Konnova,S.A.,
Zatonsky,G.V., Shashkov,A.S., Ignatov,V.V., Knirel,Y.A. (2008) Structural
analysis of the O-polysaccharide from the lipopolysaccharide of Azospirillum
brasilense S17. Carbohydr. Res., 343, 810-816.
486. Perepelov,A.V., Weintraub,A., Liu,B., Senchenkova,S.N., Shashkov,A.S.,
Feng,L., Wang,L., Widmalm,G., Knirel,Y.A. (2008) The O-polysaccharide of
Escherichia coli O112ac has the same structure as that of Shigella dysenteriae
type 2 but is devoid of O-acetylation: a revision of the S. dysenteriae type 2
O-polysaccharide structure. Carbohydr. Res., 343, 977-981.
487. Kondakova,A.N., Ho,N., Bystrova,O.V.,
Shashkov,A.S., Lindner,B., Creuzenet,C., Knirel,Y.A. (2008) Structural studies
of the O-antigens of Yersinia pseudotuberculosis O:2a and mutants thereof with
impaired 6-deoxy-D-manno-heptose biosynthesis pathway. Carbohydr. Res., 343,
1383-1389.
488. Kondakova,A.N., Bystrova,O.V., Shaikhutdinova,R.Z., Ivanov,S.A.,
Dentovskaya,S.V., Shashkov,A.S., Knirel,Y.A., Anisimov,A.P. (2008)
Reinvestigation of the O-antigens of Yersinia pseudotuberculosis: revision of
the O2c and confirmation of the O3 antigen structures. Carbohydr. Res., 343,
2486-2488.
489. Zdorovenko,E.L., Varbanets,L.D., Zatonsky,G.V., Kachala,V.V.,
Zdorovenko,G.M., Shashkov,A.S., Knirel,Y.A. (2008) Structure of the O-specific
polysaccharide of the lipopolysaccharide of Rahnella aquatilis 95 U003.
Carbohydr. Res., 343, 2494-2497.
490. Toukach,F.V., Kocharova,N.A., Maszewska,A., Shashkov,A.S., Knirel,Y.A.,
Rozalski,A. (2008) Structure of the O-polysaccharide of Providencia
alcalifaciens O8 containing (2S,4R)-2,4-dihydroxypentanoic acid, a new
non-sugar component of bacterial glycans. Carbohydr. Res., 343, 2706-2711.
491. Kocharova,N.A., Vinogradov,E., Kondakova,A.N., Shashkov,A.S., Rozalski,A.,
Knirel,Y.A. (2008) The full structure of the carbohydrate chain of the
lipopolysaccharide of Providencia alcalifaciens O19. J. Carbohydr. Chem., 27,
320-331.
492. Katzenellenbogen,E., Toukach,F.V., Kocharova,N.A., Korzeniowska-Kowal,A.,
Gamian,A., Shashkov,A.S., Knirel,Y.A. (2008) Structure of a
phosphoethanolamine-containing O-polysaccharide of Citrobacter freundii strain
PCM1443 from serogroup O39 and its relatedness to the Klebsiella pneumoniae O1
polysaccharide. FEMS Immunol. Med. Microbiol., 53, 60-64.
493. Arabski,M., Graboski,S., Konieczna,I., Kaca,W., Kondakova,A.N.,
Perepelov,A.V., Senchenkova,S.N., Shashkov,A.S., Knirel,Y.A. (2008) Serotyping
of clinical isolates belonging to Proteus mirabilis serogroup O36 and
structural elucidation of the O36-antigen polysaccharide. FEMS Immunol. Med.
Microbiol., 53, 395-403.
494. Drzewiecka,D., Arbatsky,N.P., Shashkov,A.S., Staczek,P., Knirel,Y.A.,
Sidorczyk,Z. (2008) Structure and serological properties of the O-antigen of
two clinical Proteus mirabilis strains classified into a new Proteus O77
serogroup. FEMS Immunol. Med. Microbiol., 54, 185-194.
495. Katzenellenbogen,E., Kocharova,N.A., Korzeniowska-Kowal,A., Bogulska,M.,
Rybka,J., Gamian,A., Kachala,V.V., Shashkov,A.S., Knirel,Y.A. (2008) Structure
of the glycerol phosphate-containing O-specific polysaccharide and serological
studies on the lipopolysaccharides of Citrobacter werkmanii PCM 1548 and PCM
1549 (serogroup O14). FEMS Immunol. Med. Microbiol., 54, 255-262.
496. Jimenez,N., Canals,R., Lacasta,A., Kondakova,A.N.,
Lindner,B., Knirel,Y.A., Merino,S., Regue,M., Tomas,J.M. (2008) Molecular
analysis of three Aeromonas hydrophila AH-3 (serotype O34)
lipopolysaccharide core biosynthesis gene clusters. J. Bacteriol., 190,
3176-3184.
497. Liu,B., Knirel,Y.A., Feng,L., Perepelov,A.V., Senchenkova,S.N., Wang,Q.,
Reeves,P.R., Wang,L. (2008) Structure and genetics of Shigella O antigens (a
review). FEMS Microbiol. Rev., 32, 627-653. Corrigendum in: FEMS Microbiol.
Rev., 34, 606 (2010).
498. Ho,N., Kondakova,A.N., Knirel,Y.A., Creuzenet,C.
(2008) The biosynthesis and biological role of 6-deoxyheptose in the
lipopolysaccharide O-antigen of Yersinia pseudotuberculosis. Mol. Microbiol.,
68, 424-447.
499. Wang,Q., Ding,P., Perepelov,A.V., Xu,Y., Wang,Y., Knirel,Y.A., Wang,L.,
Feng,L. (2008) Characterization of the dTDP-D-fucofuranose biosynthetic pathway
in Escherichia coli O52. Mol. Microbiol., 70, 1358-1367.
500. Kocharova,N.A., Kondakova,A.N., Vinogradov,E., Ovchinnikova,O.G.,
Lindner,B., Shashkov,A.S., Rozalski,A., Knirel,Y.A. (2008) Full structure of
the carbohydrate chain of the lipopolysaccharide of Providencia rustigianii
O34. Chem. Eur. J., 14, 6184-6191.
501. Zdorovenko,E.L., Vinogradov,E., Wydra,K.,
Lindner,B., Knirel,Y.A. (2008) Structure of the oligosaccharide chain of the
SR-type lipopolysaccharide of Ralstonia solanacearum Toudk-2.
Biomacromolecules, 9, 2215-2220.
502. Katzenellenbogen,E., Kocharova,N.A., Korzeniowska-Kowal,A., Gamian,A.,
Bogulska,M., Szostko,B., Shashkov,A.S., Knirel,Y.A. (2008) Immunochemical
studies of the lipopolysaccharides of Hafnia alvei PCM 1219 and other strains
with the O-antigens containing D-glucose 1-phosphate and
2-deoxy-2-[(R)-3-hydroxybutyramido]-D-glucose. Arch. Immunol. Ther. Exp., 56,
347-352.
503. Herget,S., Toukach,Ph.V., Ranzinger,R.,
Hull,W.E., Knirel,Y.A., von der Lieth,C.-W. (2008) Statistical analysis of the
Bacterial Carbohydrate Structure Data Base (BCSDB): Characteristics and
diversity of bacterial carbohydrates in comparison with mammalian glycans. BMC
Struct. Biol., 8, 35.
504. Shashkov,A.S., Kocharova,N.A., Toukach,F.V.,
Kachala,V.V., Knirel,Y.A. (2008) 2,4-Dihydroxypentanoic acids: new non-sugar
components of bacterial polysaccharides. Nat. Prod. Commun.,
3, 1625-1630.
2009
505. Kondakova,A.N., Bystrova,O.V., Shaikhutdinova,R.Z., Ivanov,S.A.,
Dentovskaya,S.V., Shashkov,A.S., Knirel,Y.A., Anisimov,A.P. (2009) Structure of
the O-antigen of Yersinia pseudotuberculosis O:4b. Carbohydr. Res., 344,
152-154.
506. Kondakova,A.N., Bystrova,O.V., Shaikhutdinova,R.Z., Ivanov,S.A.,
Dentovskaya,S.V., Shashkov,A.S., Knirel,Y.A., Anisimov,A.P. (2009) Structure of
the O-polysaccharide of Yersinia pseudotuberculosis O:2b. Carbohydr. Res., 344,
405-407.
507. Knirel,Y.A., Senchenkova,S.N., Shashkov,A.S., Esteve,C., Alcaide,E., Merino,S.,
Tomas,J.M. (2009) Structure of a polysaccharide from the lipopolysaccharide of
Vibrio vulnificus CECT4602 containing 2-acetamido-2,3,6-trideoxy-3-[(S)- and
(R)-3-hydroxybutanoylamino]-L-mannose. Carbohydr. Res., 344, 479-483.
508. Kondakova,A.N., Bystrova,O.V., Shaikhutdinova,R.Z., Ivanov,S.A.,
Dentovskaya,S.V., Shashkov,A.S., Knirel,Y.A., Anisimov,A.P. (2009) Structure of
the O-antigen of Yersinia pseudotuberculosis O:4a revised. Carbohydr. Res.,
344, 531-534.
509. Ovchinnikova,O.G., Kocharova,N.A., Shashkov,A.S., Knirel,Y.A., Rozalski,A.
(2009) Structure of the O-polysaccharide from the lipopolysaccharide of
Providencia alcalifaciens O31 containing an ether of D-mannose with
(2R,4R)-2,4-dihydroxypentanoic acid. Carbohydr. Res., 344, 683-686.
510. Perepelov,A.V., L'vov,V.L., Liu,B., Senchenkova,S.N., Shekht,M.E.,
Shashkov,A.S., Feng,L., Aparin,P.G., Wang,L., Knirel,Y.A. (2009) A similarity
in the O-acetylation pattern of the O-antigens of Shigella flexneri types1a, 1b
and 2a. Carbohydr. Res., 344, 687-692.
511. Senchenkova,S.N., Shashkov,A.S., Knirel,Y.A.,
Esteve,C., Alcaide,E., Merino,S., Tomas,J.M. (2009) Structure of a
polysaccharide from the lipopolysaccharide of Vibrio vulnificus clinical
isolate YJ016 containing 2-acetimidoylamino-2-deoxy-L-galacturonic acid.
Carbohydr. Res., 344, 1009-1013.
512. Zdorovenko,E.L., Varbanets,L.D., Zatonsky,G.V., Zdorovenko,G.M.,
Shashkov,A.S., Knirel,Y.A. (2009) Isolation and structure elucidation of two
different polysaccharides from the lipopolysaccharide of Rahnella aquatilis
33071T. Carbohydr. Res., 344, 1259-1262.
513. Perepelov,A.V., L'vov,V.L., Liu,B., Senchenkova,S.N., Shekht,M.E.,
Shashkov,A.S., Feng,L., Aparin,P.G., Wang,L., Knirel,Y.A. (2009) A new
ethanolamine phosphate-containing variant of the O-antigen of Shigella flexneri
type 4a. Carbohydr. Res., 344, 1588-1591.
514. Katzenellenbogen,E., Kocharova,N.A.,
Toukach,F.V., Gorska,S., Korzeniowska-Kowal,A., Bogulska,M., Gamian,A.,
Knirel,Y.A. (2009) Structure of an abequose-containing O-polysaccharide from Citrobacter
freundii O22 strain PCM 1555. Carbohydr. Res., 344, 1724-1728.
515. Shashkov,A.S., Senchenkova,S.N., Chizhov,A.O., Knirel,Y.A., Esteve,C.,
Alcaide,E., Merino,S., Tomas,J.M. (2009) Structure of a polysaccharide from the
lipopolysaccharides of Vibrio vulnificus strains CECT 5198 and S3-I2-36, which
is remarkably similar to the O-polysaccharide of Pseudoalteromonas rubra ATCC
29570. Carbohydr. Res., 344, 2005-2009.
516. Kocharova,N.A., Kondakova,A.N., Ovchinnikova,O.G., Perepelov,A.V.,
Shashkov,A.S., Knirel,Y.A. (2009) N-(1-Carboxyethyl)alanine (alanopine), a new
non-sugar component of lipopolysaccharides of Providencia and Proteus.
Carbohydr. Res., 344, 2060-2062.
517. Zdorovenko,E.L., Kachala,V.V., Sidarenka,A.S., Izhik,A.V., Kisileva,E.P.,
Shashkov,A.S., Novik,G.I., Knirel,Y.A. (2009) Structure of the cell-wall
polysaccharides of probiotic bifidobacteria Bifidobacterium bifidum BIM B-465.
Carbohydr. Res., 344, 2417-2420.
518. Kondakova,A.N., Shaikhutdinova,R.Z., Ivanov,S.A.,
Dentovskaya,S.V., Shashkov,A.S., Anisimov,A.P., Knirel,Y.A. (2009) Revision of
the O-polysaccharide structure of Yersinia pseudotuberculosis O:1b. Carbohydr.
Res., 344, 2421-2423.
519. Zdorovenko,E.L., Valueva,O.A., Kachala,V.V., Shashkov,A.S.,
Kocharova,N.A., Knirel,Y.A., Kutkowska,J., Turska-Szewczuk,A.,
Urbanik-Sypniewska,T., Choma,A., Russa,R. (2009) Structure of the
O-polysaccharides of the lipopolysaccharides of Mesorhizobium loti HAMBI 1148
and Mesorhizobium amorphae ATCC 19655 containing two methylated
monosaccharides. Carbohydr. Res., 344, 2519-2527.
520. Kondakova,A.N., Vinogradov,E.,
Katzenellenbogen,E., Kocharova,N.A., Lindner,B., Knirel,Y.A. (2009) Structural
studies on the lipopolysaccharide core of bacteria of the genus Citrobacter:
Two different core structures in Citrobacter O14 serogroup. J. Carbohydr.
Chem., 28, 298-315.
521. Perepelov,A.V., Wang,Q., Liu,B., Senchenkova,S.N., Feng,L., Shashkov,A.S.,
Wang,L., Knirel,Y.A. (2009) Structure of the O-polysaccharide of Escherichia
coli O61, another E. coli O-antigen that contains
5,7-diacetamido-3,5,7,9-tetradeoxy-L-glycero-D-galacto-non-2-ulosonic
(di-N-acetyl-8-epilegionaminic) acid. J. Carbohydr. Chem., 28, 463-472.
522. Wang,Q., Perepelov,A.V., Feng,L., Knirel,Y.A., Li,Y., Wang,L. (2009)
Genetic and structural analyses of Escherichia coli O107 and O117 O antigens.
FEMS Immunol. Med. Microbiol., 55, 47-54.
523. Perepelov,A.V., Li,D., Liu,B., Senchenkova,S.N., Guo,D., Shevelev,S.D.,
Shashkov,A.S., Guo,X., Feng,L., Knirel,Y.A., Wang,L. (2009) Structural and
genetic characterization of Escherichia coli O99 antigen. FEMS Immunol. Med.
Microbiol., 57, 80-87.
524. Perepelov,A.V., Senchenkova,S.N., Shashkov,A.S., Knirel,Y.A., Liu,B.,
Feng,L., Wang,L. (2009) A completed structure of the O-polysaccharide from
Shigella dysenteriae type 10. Bioorg. Khim., 35,
142-144 [In Russian; English translation: Russ. J. Bioorg. Chem., 35, 131-133].
525. Ovchinnikova,O.G., Kocharova,N.A., Shashkov,A.S.,
Knirel,Y.A., Rozalski,A. (2009) Antigenic polysaccharides of bacteria. 43.
Structure of the O-specific polysaccharide of the bacterium Providencia
alcalifaciens O46. Bioorg. Khim., 35, 408-413 [In
Russian; English translation: Russ. J. Bioorg. Chem., 35, 370-375].
526. Perepelov,A.V., Wang,Q., Senchenkova,S.N., Shashkov,A.S., Feng,L.,
Wang,L., Knirel,Y.A. (2009) Structure of O-antigen and characterization of
O-antigen gene cluster of Salmonella enterica O47 containing ribitol phosphate
and 2-acetimidoylamino-2,6-dideoxy-L-galactose. Biokhimiya, 74, 516-521 [In
Russian; English translation: Biochemistry (Moscow), 74, 416-420].
527. Feodorova,V.A., Pan'kina,L.N., Savostina,E.P., Kuznetsov,O.V.,
Konnov,N.P., Sayapina,L.V., Dentovskaya,S.V., Shaikhutdinova,R.Z., Ageev,S.A.,
Lindner,B., Kondakova,A.N., Kocharova,N.A., Senchenkova,S.N., Holst,O., Pier,G.B.,
Knirel,Y.A., Anisimov,A.P., Motin,V.L. (2009) Pleiotropic effects of the lpxM
mutation in Yersinia pestis resulting in modification of the biosynthesis of
major immunoreactive antigens. Vaccine, 27, 2240-2250.
528. Knirel,Y.A., Senchenkova,S.N., Shashkov,A.S., Perepelov,A.V.,
Shevelev,S.D., Liu,B., Feng,L., Wang,L. (2009) First isolation and
identification of a derivative of
5,7-diamino-3,5,7,9-tetradeoxy-L-glycero-D-galacto-non-2-ulosonic
(8-epilegionaminic) acid. Adv. Sci. Lett., 2, 384-387.
529. Lewis,A.L., Desa,N., Hansen,E.E., Knirel,Y.A., Gordong,J.I., Gagneux,P.,
Nizet,V., Varki,A. (2009) Innovations in host and microbial sialic acid
biosynthesis revealed by phylogenomic prediction of nonulosonic acid structure.
Proc. Natl. Acad. Sci. U.S.A., 106, 13552-13557.
530. Telepnev,M.V., Klimpel,G.R., Haithcoat,J.,
Knirel,Y.A., Anisimov,A.P., Motin,V.L. (2009) Tetraacylated lipopolysaccharide
of Yersinia pestis can inhibit multiple Toll-like receptor (TLR)-mediated
signaling pathways in human dendritic cells. J. Infect. Dis., 200, 1694-1702.
Corrigendum in: J. Infect. Dis., 201, 314 (2010).
531. Feodorova,V.A., Pan'kina,L.N., Savostina,E.P., Kuznetsova,O.S.,
Konnova,N.P., Sayapina,L.V., Dentovskaya,S.V., Shaikhutdinova,R.Z., Ageev,S.A.,
Lindner,B., Kondakova,A.N., Kocharova,N.A., Senchenkova,S.N., Holst,O.,
Pier,G.B., Knirel,Y.A., Anisimov,A.P., Motin,V.L. (2009) Yersinia pestis live
vaccine with improved characteristics. Procedia Vaccinol., 1, 97-100.
531. Knirel,Y.A. (2009) Structures of bacterial polysaccharides.
In Progress in the synthesis of complex carbohydrate chains of plant and
microbial polysaccharides (Nifantiev,N.E., ed.) pp.
181-198. Transworld Research Network, Kerala, India.
532. Knirel,Y.A. (2009) O-Specific polysaccharides of
Gram-negative bacteria. In Microbial glycobiology: Structures, relevance and
applications (Moran,A., Brennan,P., Holst,O., Von
Itzstein,M., eds.) pp. 57-73. Elsevier.
2010
533. Perepelov,A.V., Liu,B., Senchenkova,S.N., Shashkov,A.S., Shevelev,S.D.,
Feng,L., Wang,L., Knirel,Y.A. (2010) Structure of the O-antigen and
characterization of the O-antigen gene cluster of Escherichia coli O108
containing
5,7-diacetamido-3,5,7,9-tetradeoxy-L-glycero-D-galacto-non-2-ulosonic
(8-epilegionaminic) acid. Biokhimiya, 75, 27-33 [In Russian; English
translation: Biochemistry (Moscow), 75, 19-24].
534. Mokrievich,A.N., Kondakova,A.N., Valade,E., Platonov,M.E.,
Vakhrameeva,G.M., Shaikhutdinova,R.Z., Mironova,R.I., Blaha,D., Bakhteeva,I.V.,
Titareva,G.M., Kravchenko,T.B., Kombarova,T.I., Vidal,D., Pavlov,V.M.,
Lindner,B., Dyatlov,I.A., Knirel,Y.A. (2010) Biological properties and
structure of the lipopolysaccharide of a vaccine strain of Francisella
tularensis generated by inactivation of a quorum sensing system gene qseC.
Biokhimiya, 75, 539-548 [In Russian; English translation: Biochemistry
(Moscow), 75, 443-451].
535. Perepelov,A.V., Liu,B., Shevelev,S.D., Senchenkova,S.N., Shashkov,A.S.,
Feng,L., Knirel,Y.A., Wang,L. (2010) Relatedness of the O-polysaccharide
structures of Escherichia coli O123 and Salmonella enterica O58, both
containing 4,6-dideoxy-4-{N-(S)-3-hydroxybutanoyl]-D-alanyl}amino-D-glucose;
revision of the E. coli O123 O-polysaccharide structure. Carbohydr. Res., 345,
825-829.
536. Perepelov,A.V., Liu,B., Senchenkova,S.N., Shashkov,A.S., Feng,L.,
Knirel,Y.A., Wang,L. (2010) Structure of the O-polysaccharide of Salmonella
enterica O41. Carbohydr. Res., 345, 971-973.
537. Parkhomchuk,A.A., Kocharova,N.A.,
Bialczak-Kokot,M., Shashkov,A.S., Chizhov,A.O., Knirel,Y.A., Rozalski,A. (2010)
Structure of the O-polysaccharide from the lipopolysaccharide of Providencia
alcalifaciens O12. Carbohydr. Res., 345, 1235-1239.
538. Li,X., Perepelov,A.V., Wang,Q., Senchenkova,S.N., Liu,B., Shevelev,S.D.,
Guo,X., Shashkov,A.S., Chen,W., Wang,L., Knirel,Y.A. (2010) Structural and
genetic characterization of the O-antigen of Escherichia coli O161 containing a
derivative of a higher acidic diamino sugar, legionaminic acid. Carbohydr.
Res., 345, 1581-1587.
539. Perepelov,A.V., Shevelev,S.D., Liu,B., Senchenkova,S.N., Shashkov,A.S.,
Feng,L., Knirel,Y.A., Wang,L. (2010) Structures of the O-antigens of
Escherichia coli O13, O129 and O135 related to the O-antigens of Shigella
flexneri. Carbohydr. Res., 345, 1594-1599.
540. Perepelov,A.V., Liu,B., Senchenkova,S.N., Shashkov,A.S., Feng,L.,
Knirel,Y.A., Wang,L. (2010) Structure and gene cluster of the O-antigen of
Salmonella enterica O60 containing 3-formamido-3,6-dideoxy-D-galactose.
Carbohydr. Res., 345, 1632-1634.
541. Perepelov,A.V., Liu,B., Senchenkova,S.N., Shevelev,S.D., Feng,L.,
Shashkov,A.S., Wang,L., Knirel,Y.A. (2010) The O-antigen of Salmonella enterica
O13 and its relation to the O-antigen of Escherichia coli O127. Carbohydr.
Res., 345, 1808-1811.
542. Zdorovenko E.L., Valueva O.A., Varbanets L., Shubchinskiy V., Shashkov
A.S., Knirel Y.A. (2010) Structure of the O-polysaccharide of the
lipopolysaccharide of Pragia fontium 97U116. Carbohydr. Res., 345, 1812-1815.
543. Perepelov A.V., Liu B., Shevelev S.D., Senchenkova S.N., Hu B., Shashkov
A.S., Feng L., Knirel Y.A., Wang L. (2010) Structural and genetic
characterization of the O-antigen of Salmonella enterica O56 containing a novel
derivative of 4-amino-4,6-dideoxy-D-glucose. Carbohydr. Res., 345, 1891-1895.
544. Arbatsky,N.P., Wang,M., Shashkov,A.S.,
Chizhov,A.O., Feng,L., Knirel,Y.A., Wang,L. (2010) Structure of the
O-polysaccharide of Cronobacter sakazakii O2 with a randomly O-acetylated
L-rhamnose residue. Carbohydr. Res., 345, 2090-2094.
545. Arbatsky,N.P., Wang,M., Shashkov,A.S., Feng,L.,
Knirel,Y.A., Wang,L. (2010) Structure of the O-polysaccharide of Cronobacter
sakazakii O1 containing 3-(N-acetyl-L-alanyl)amino-3,6-dideoxy-D-glucose.
Carbohydr. Res., 345, 2095-2098.
546. Perepelov,A.V., Liu,B., Senchenkova,S.N., Shashkov,A.S., Guo,D., Feng,L.,
Knirel,Y.A., Wang,L. (2010) Structure and gene cluster of the O-polysaccharide
of Salmonella enterica O44. Carbohydr. Res., 345, 2099-2101.
547. Arbatsky,N.P., Kondakova,A.N., Shashkov,A.S., Drutskaya,M.S.,
Belousov,P.V., Nedospasov,S.A., Petrova,M.A., Knirel,Y.A. (2010) Structure of
the O-polysaccharide of Acinetobacter sp. VS-15 and Acinetobacter lwoffii EK67.
Carbohydr.Res., 345, 2287-2290.
548. Kocharova,N.A., Katzenellenbogen,E.,
Zatonsky,G.V., Gamian,A., Bzozovska,E., Shashkov,A.S., Knirel,Y.A. (2010)
Structure of the O-polysaccharide of Citrobacter youngae PCM 1503. Carbohydr.
Res., 345, 2571-2573.
549. Ren,Y., Perepelov,A.V., Wang,H., Zhang,H., Knirel,Y.A., Wang,L., Chen,W.
(2010) Biochemical characterization of GDP-L-fucose de novo synthesis pathway
in fungus Mortierella alpina. Biochem. Biophys. Res. Commun., 391, 1663-1669.
550. Drzewiecka,D., Arbatsky,N.P., Staczek,P.,
Shashkov,A.S., Knirel,Y.A., Sidorczyk,Z. (2010) Structural and serological
studies of the O-polysaccharide of strains from a newly created Proteus O78
serogroup prevalent in Polish patients. FEMS Immunol. Med. Microbiol., 58,
269-276.
551. Hu,B., Perepelov,A.V., Liu,B., Shevelev,S.D., Guo,D., Senchenkova,S.N.,
Shashkov,A.S., Feng,L., Knirel,Y.A., Wang,L. (2010) Structural and genetic
evidence for the close relationship between Escherichia coli O71 and Salmonella
enterica O28 O-antigens. FEMS Immunol. Med. Microbiol., 59, 161-169.
552. Liu,B., Perepelov,A.V., Guo,D., Shevelev,S.D., Senchenkova,S.N., Feng,L.,
Shashkov,A.S., Wang,L., Knirel,Y.A. (2010) Structural and genetic relationships
between the O-antigens of Escherichia coli O118 and O151. FEMS Immunol. Med.
Microbiol., 60, 199-207.
553. Liu,B., Perepelov,A.V., Svensson,M.V., Shevelev,S.D., Guo,D.,
Senchenkova,S.N., Shashkov,A.S., Weintraub,A., Feng,L., Widmalm,G.,
Knirel,Y.A., Wang,L. (2010) Genetic and structural relationships of Salmonella
O55 and Escherichia coli O103 O-antigens and identification of a
3-hydroxybutanoyltransferase gene involved in the synthesis of a Fuc3N derivative.
Glycobiology, 20, 679-688.
554. Suomalainen,M., Lobo,L., Brandenburg,K., Lindner,B., Virkola,R.,
Knirel,Y.A., Anisimov,A.P., Holst,O., Korhonen,T.K. (2010) Temperature-induced
changes in the lipopolysaccharide of Yersinia pestis affect plasminogen activation
by the Pla surface protease. Infect. Immun., 78, 2644-2652.
555. Liu,B., Perepelov,A.V., Li,D., Senchenkova,S.N., Han,Y., Shashkov,A.S.,
Feng,L., Knirel,Y.A., Wang,L. (2010) Structure of the O-antigen of Salmonella
O66 and the genetic basis for similarity and differences between the closely
related O-antigens of Escherichia coli O166 and Salmonella O66. Microbiology,
156, 1642-1649.
556. Wang,Q., Xu,Y., Perepelov,A.V., Wei,D., Shashkov,A.S., Xiong,W.,
Knirel,Y.A., Feng,L., Wang,L. (2010) Characterization of the CDP-2-glycerol
biosynthetic pathway in Streptococcus pneumoniae. J. Bacteriol., 192,
5506-5514.
557. Arbatsky,N.P., Kondakova,A.N., Shashkov,A.S., Drutskaya,M.S.,
Belousov,P.V., Nedospasov,S.A., Petrova,M.A., Knirel,Y.A. (2010) Structure of
the O-antigen of Acinetobacter lwoffii EK30A; identification of D-homoserine, a
novel non-sugar component of bacterial polysaccharides. Org. Biomol. Chem., 8,
3571-3577.
558. Fedonenko,Y.P., Katsy,E.I., Petrova,L.P., Boyko,A.S., Zdorovenko,E.L.,
Kachala,V.V., Shashkov,A.S., Knirel,Y.A. (2010) The structure of the O-specific
polysaccharide from a mutant of nitrogen-fixing rhizobacterium Azospirillum
brasilense Sp245 with an altered plasmid content. Bioorg. Khim.,
36, 236-240 [In Russian; English translation: Russ. J. Bioorg. Chem., 36,
219-223].
559. Kondakova,A.N., Vinogradov,E.V., Shekht,M.E., Markina,A.A., Lindner,B.,
L'vov,V.L., Aparin,P.G., Knirel,Y.A. (2010) Structure of the oligosaccharide
region (core) of the lipopolysaccharides of Shigella flexneri types 2a and 5b.
Bioorg. Khim., 36, 429-432 [In Russian; English
translation: Russ. J. Bioorg. Chem., 36, 336-339].
560. Kiseleva,E.P., Tsyganova,O.V., Mikhailopulo,K.I., Sviridov,O.V.,
Demidchic,Y.E., Izhik,A.V., Knirel,Y.A., Novik,G.I. (2010) Possible role of
probiotic microorganisms of Bifidobacterium and Lactobacillus genus in
pathogenesis of autoimmune thyroid diseases. Med. Immunol., 12, 71-80 [In
Russian].
561. Anisimov,A.P., Dentovskaya,S.V., Kondakova,A.N., Lindner,B.,
Shaikhutdinova,R.Z., Kocharova,N.A., Senchenkova,S.N., Knirel,Y.A. (2010)
Yersinia pestis lipopolysaccharide in host-pathogen interactions. In The сhallenge
of highly pathogenic microorganisms - Mechanism of virulence and novel medical
countermeasures (Proc. Oholo 2009 Conference, Eilat, Israel, 25-29 October
2009) Schafferman,A., Ordentlich,A., B. Velan,B., eds), pp. 77-87. Springer,
Dordrecht, Heidelberg, London.
562. Feodorova,V.A., Pan'kina,L.N., Savostina,E.P., Kuznetsova,O.S.,
Konnov,N.P., Sayapina,L.V., Dentovskaya,S.V., Shaikhutdinova,R.Z., Ageev,S.A.,
Lindner,B., Kondakova,A.N., Holst,O., Pier,G.B., Knirel,Y.A., Anisimov,A.P.,
Motin,V.L. (2010) A live plague vaccine candidate with improved safe1ty and
immunogenicity. In The сhallenge of highly pathogenic microorganisms - Mechanism of virulence
and novel medical countermeasures (Proc. Oholo 2009 Conference, Eilat, Israel,
25-29 October 2009) Schafferman,A., Ordentlich,A., B. Velan,B., eds), pp.
261-268. Springer, Dordrecht, Heidelberg, London.
2011
563. Kocharova,N.A., Ovchinnikova,O.G.,
Bialczak-Kokot,M., Shashkov,A.S., Knirel,Y.A., Rozalski,A. (2011) Structure of
the O-polysaccharide of Providencia alcalifaciens O25 containing an amide of
D-galacturonic acid with Ne-[(R)-1-carboxyethyl]-L-lysine. Biokhimiya, 76,
864-871 [In Russian; English translation: Biochemistry (Moscow), 76, 709-712].
564. Perepelov,A.V., Liu,B., Guo,D., Senchenkova,S.N., Shashkov,A.S., Feng,L.,
Wang,L., Knirel,Y.A. (2011) Structure elucidation of the O-antigen of
Salmonella enterica O51 and its structural and genetic relation to the
O-antigen of Escherichia coli O23. Biokhimiya, 76, 948-955 [In Russian; English
translation: Biochemistry (Moscow), 76, 774-779].
565. Fedonenko,Y.P., Boyko,A.S., Zdorovenko,E.L., Konnova,S.A., Shashkov,A.S.,
Ignatov,V.V., Knirel,Y.A. (2011) Structural pecularities of the O-specific
polysaccharides of Azospirillum bacteria of serogroup III. Biokhimiya, 76,
976-982 [In Russian; English translation: Biochemistry (Moscow), 76, 797-802].
566. Dentovskaya,S.V., Anisimov,A.P., Kondakova,A.N., Bystrova,O.V.,
Lindner,B., Svetoch,T.E., Shaikhutdinova,R.Z., Ivanov,S.A., Bakhteeva,I.V.,
Titareva,G.M., Knirel,Y.A. (2011) Functional characterization and biological
significance of Yersinia pestis lipopolysaccharide biosynthesis genes. Biokhimiya,
76, 989-1005 [In Russian; English translation: Biochemistry (Moscow), 76,
808-822].
567. Valueva,O.A., Zdorovenko,E.L., Kachala,V.V., Varbanets,L.D.,
Arbatsky,N.P., Shubchinskiy,V.V., Shashkov,A.S., Knirel,Y.A. (2011) Structure
of the O-polysaccharide of Pragia fontium 27480 containing
2,3-diacetamido-2,3-dideoxy-D-mannuronic acid. Carbohydr. Res., 346, 146-149.
568. Perepelov,A.V., Liu,B., Senchenkova,S.N., Shashkov,A.S., Feng,L.,
Knirel,Y.A., Wang,L. (2011) Structure of the O-polysaccharide and characterization
of the O-antigen gene cluster of Salmonella enterica O53. Carbohydr. Res., 346,
373-376.
569. Ovchinnikova,O.G., Kocharova,N.A.,
Parkhomchuk,A.A., Bialczak-Kokot,M., Shashkov,A.S., Knirel,Y.A., Rozalski,A.
(2011) Structure of the O-polysaccharide from the lipopolysaccharide of
Providencia alcalifaciens O60. Carbohydr. Res. 346, 377-380.
570. Perepelov,A.V., Liu,B., Senchenkova,S.N., Shashkov,A.S., Guo,D., Feng,L.,
Knirel,Y.A., Wang,L. (2011) Structures of the O-polysaccharides of Salmonella
enterica O59 and Escherichia coli O15. Carbohydr. Res. 346, 381-383.
571. Perepelov,A.V., Kocharova,N.A., Knirel,Y.A., Jansson,P.-E., Weintraub,A.
(2011) Structure of the O-polysaccharide of Vibrio cholerae O43 containing a
new monosaccharide derivative, 4-(N-acetyl-L-allothreonyl)amino-4,6-dideoxy-D-glucose.
Carbohydr.Res., 346, 430-433.
572. Ovchinnikova,O.G., Kocharova,N.A., Shashkov,A.S.,
Arbatsky,N.P., Rozalski,A., Knirel,Y.A. (2011) Elucidation of the full
O-polysaccharide structure and identification of the oligosaccharide core type
of the lipopolysaccharide of Providencia alcalifaciens O9. Carbohydr.Res.,
346, 644-650.
573. Perepelov,A.V., Liu,B., Senchenkova,S.N., Guo,D., Shevelev,S.D., Feng,L.,
Shashkov,A.S., Wang,L., Knirel,Y.A. (2011) O-antigen structure and gene
clusters of Escherichia coli O51 and Salmonella enterica O57; another instance
of identical O-antigens in the two species. Carbohydr.Res.,
346, 828-832.
574. Arbatsky,N.P., Wang,M., Daeva,E.D., Shashkov,A.S., Feng,L., Knirel,Y.A.,
Wang,L. (2011) Elucidation of the structure and characterization of the gene
cluster of the O-antigen of Cronobacter sakazakii G2592, the reference strain
of C. sakazakii O7 serotype. Carbohydr.Res., 346,
1169-1172.
575. Shashkov,A.S., Arbatsky,N.P., Knirel,Y.A. (2011) Structures and genetics
of Kdo-containing O-antigens of Cronobacter sakazakii G2706 and G2704, the
reference strains of serotypes O5 and O6. Carbohydr. Res. 346, 1924-1929.
576. Kondakova,A.N., Kirsheva,N.A., Shashkov,A.S., Shaikhutdinova,R.Z.,
Arbatsky,N.P., Ivanov,S.A., Anisimov,A.P., Knirel,Y.A. (2011) Low structural
diversity of the O-polysaccharides of Photorhabdus asymbiotica subsp.
asymbiotica and australis and their similarity to the O-polysaccharides of
taxonomically remote bacteria including Francisella tularensis. Carbohydr.
Res., 346, 1951-1955.
577. Perepelov,A.V., Wang,Q., Shashkov,A.S., Wen,L., Wang,L.,Knirel,Y.A. (2011)
Structure and genetics of the O-antigen of Escherichia coli O158. Carbohydr.
Res. 346, 2274-2277.
578. Ovchinnikova,O.G., Kocharova,N.A.,
Kondakova,A.N., Bialczak-Kokot,M., Shashkov,A.S., Knirel,Y.A., Rozalski,A.
(2011) Structure of the O-polysaccharide from the lipopolysaccharide of
Providencia alcalifaciens O28. Carbohydr. Res. 346, 2638-2641.
579. Perepelov,A.V., Zhu,H., Senchenkova,S.N., Wang,Q., Shashkov,A.S., Wang,L.,
Knirel,Y.A. (2011) Structure and gene cluster of the O-antigen of Escherichia
coli O19ab. Carbohydr. Res. 346, 2812-2815.
580. Perepelov,A.V., Ni,Z., Wang,Q., Shevelev,S.D., Senchenkova,S.N.,
Shashkov,A.S., Wang,L., Knirel,Y.A. (2011) Structure and gene cluster of the
O-antigen of Escherichia coli O109; chemical and genetic evidences of the
presence of L-RhaN3N derivatives in the O-antigens of E. coli O109 and O119.
FEMS Immunol. Med. Microbiol., 61, 47-53.
581. Li,Y., Perepelov,A.V., Guo,D., Shevelev,S.D., Senchenkova,S.N.,
Shashkov,A.S., Liu,B., Wang,L., Knirel,Y.A. (2011) Structural and genetic
relationships of two pairs of closely related O-antigens of Escherichia coli
and Salmonella enterica: E. coli O11/S. enterica O16 and E. coli O21/S.
enterica O38. FEMS Immunol.Med.Microbiol., 61,
258-268.
582. Knirel,Y.A., Perepelov,A.V., Kondakova,A.N., Senchenkova,S.N.,
Sidorczyk,Z., Rozalski,A., Kaca,W. (2011) Structure and serology of O-antigens
as the basis for classification of Proteus strains. Innate Immun., 17, 70-96.
583. Perepelov,A.V., Li,D., Liu,B., Shevelev,S.D., Guo,D., Senchenkova,S.N.,
Shashkov,A.S., Feng,L., Knirel,Y.A., Wang,L. (2011) Structural and genetic
characterization of the closely related O-antigens of Escherichia coli O85 and
Salmonella enterica O17. Innate Immun., 17, 164-173.
584. Feinberg,H., Taylor,M.E., Razi,N., McBride,R., Knirel,Y.A., Graham,S.A.,
Drickamer,K., Weis,W.I. (2011) Structural basis for langerin recognition of
diverse pathogen and mammalian glycans through a single binding site. J. Mol.
Biol., 405, 1027-1039.
585. Kiljunen,S., Datta,N., Dentovskaya,S.V.,
Anisimov,A.P., Knirel,Y.A., Bengoechea,J.A., Holst,O., Skurnik,M. (2011)
Identification of the lipopolysaccharide core of Yersinia pestis and Yersinia
pseudotuberculosis as the receptor for bacteriophage φA1122.
J. Bacteriol., 193, 4963-4972.
586. Kiseleva,E.P., Mikhailopulo,K.I., Tryganova,O.V., Sviridova,O.V.,
Knirel,Y.A., Novik,G.I., Szwajcer Dey,E. (2011) Role of components of
Bifidobacterium and Lactobacillus and specific to them human antibodies in
pathogenesis and serologic diagnosis of thyroid autoimmune diseases and celiac
disease. Beneficial Microbes, 2, 139-154.
587. Zdorovenko,E.L., Varbanets, L.D., Brovarskaya, O.S., Valueva, O.A.,
Shashkov, A.S., Knirel,Y.A. (2011) Lipopolysaccharide of Budvicia aquatica
97U124: Immunochemical properties and structure. Mikrobiologiya, 80, 366-371
[In Russian; English translation: Microbiology, 80, 372-377].
588. Valueva,O.A., Rakhuba,D., Shashkov,A.S., Zdorovenko,E.L., Kisileva,E.,
Novik,G., Knirel,Y.A. (2011) Structure of the major O-specific polysaccharide
from the lipopolysaccharide of Pseudomonas fluorescens BIM B-582:
identification of 4-deoxy-D-xylo-hexose, a novel component of bacterial
polysaccharides. J. Nat. Prod., 74, 2161-2167.
589. Knirel,Y.A., Perepelov,A.V., Shevelev,S.D. (2011)
Higher aldulosonic acids: components of bacterial glycans. Mendeleev Commun.,
21, 173-182.
590. Knirel,Y.A., Kondakova,A.N., Vinogradov,E., Lindner,B., Perepelov,A.V.,
Shashkov,A.S. (2011) Lipopolysaccharide core structures and their correlation
with genetic groupings of Shigella strains. A novel core variant in Shigella
boydii type 16. Glycobiology, 21, 1362-1372.
591. Bacterial lipopolysaccharides: structure, chemical synthesis, biogenesis
and interaction with host cells (Knirel Y.A., Valvano M.A., eds.)
SpringerWienNewYork, Wien, 2011.
592. Knirel,Y.A. (2011) Structure of O-antigens. In
Bacterial lipopolysaccharides: structure, chemical synthesis, biogenesis and
interaction with host cells (Knirel,Y.A.,
Valvano,M.A., eds.) SpringerWienNewYork, Wien. pp. 41-115.
593. Sturiale,L., Palmigiano,A., Silipo,A., Knirel,Y.A., Anisimov,A.P.,
Lanzetta,R., Parrilli,M., Molinaro,A., Garozzo,D. (2011) Reflectron MALDI TOF
and MALDI TOF/TOF mass spectrometry reveal novel structural details of native
lipooligosaccharides. J. Mass Spectrom., 46,
1135-1142.
594. Izhik,A.V., Novik, G.I., Zdorovenko,E.L., Rukhuba,D.V., Kiseleva,E.P.,
Knirel,Y.A. (2011) Production of biologically active polysaccharides of
Lactobacillus plantarum BIM V-495-D and Lactococcus lactis subsp. cremoris BIM V-493-D. Biotekhnologiya, 50-58 [In Russian].
595. Knirel,Y.A., Anisimov,A.P., Fedorova,V.A. (2011) Struggling for control over the plague. The past and present of the Black
Death. Vestnik RAN, 81, 33-42 [In Russian; English translation: Herald Rus. Acad. Sci., 81, 35-43].
596. Anisimov,A.P., Knirel,U.A., Fedorova,V.A. (2011) In the struggle for control of the plague: the past and the present "Black
Plague". In Collection of best popular articles written for the contest, organized by the Russian Foundation of Basic Research, Vol. 14 (Shahnov,V.A., ed.) RaTechNik, Moscow, pp. 225-236 [In Russian].
2012
597. Ovchinnikova,O.G., Liu,B., Kocharova,N.A., Shashkov,A.S., Kondakova,A.N.,
Siwinska,M., Feng,L., Rozalski,A., Wang,L., Knirel,Y.A. (2012) Structure of a
peptidoglycan-related polysaccharide from Providencia alcalifaciens O45.
Biokhimiya, 77, 750-757 [In Russian; English translation: Biochemistry
(Moscow), 77, 609-615].
598. Ovchinnikova,O.G., Kocharova,N.A., Shashkov,A.S., Knirel,Y.A., Rozalski,A.
(2012) Structure of the O-polysaccharide from the lipopolysaccharide of
Providencia alcalifaciens O48. Carbohydr. Res., 347, 168-171.
599. Kondakova,A.N., Novototskaya-Vlasova,K.A., Drutskaya,M.S.,
Senchenkova,S.N., Shcherbakova,V.A., Shashkov,A.S., Gilichinsky,D.A.,
Nedospasov,S.A., Knirel,Y.A. (2012) Structure of the O-polysaccharide chain of
the lipopolysaccharide of Psychrobacter muricolla 2pST isolated from overcooled
water brines within permafrost. Carbohydr. Res., 349, 78-81.
600. Zhu,H., Perepelov,A.V., Senchenkova,S.N., Shashkov,A.S., Wang,L.,
Knirel,Y.A. (2012) Structure and gene cluster of the O-antigen of Escherichia
coli O41. Carbohydr. Res., 349, 86-89.
601. Ovchinnikova,O.G., Arbatsky,N.P., Chizhov,A.O., Kocharova,N.A.,
Shashkov,A.S.,Rozalski,A., Knirel,Y.A. (2012) Structure of a polysaccharide
from Providencia alcalifaciens O11 containing a novel amide of 2-acetamido-2-deoxygalacturonic
acid with L-glutamyl-L-alanine. Carbohydr. Res., 349, 95-102.
602. Kondakova,A.N., Sevillano,A.M., Shaikhutdinova,R.Z., Lindner,B.,
Komandrova,N.A., Dentovskaya,S.V., Shashkov,A.S., Anisimov,A.P., Skurnik,M.,
Knirel,Y.A. (2012) Revision of the O-polysaccharide structure of Yersinia
pseudotuberculosis O:1a; confirmation of the function of WbyM as
paratosyltransferase. Carbohydr. Res., 350, 98-102.
603. Kondakova,A.N., Kirsheva,N.A., Shashkov,A.S., Shaikhutdinova,R.Z.,
Arbatsky,N.P., Ivanov,S.A., Anisimov,A.P., Knirel,Y.A. (2012) Structure of the
O-polysaccharide of Photorhabdus luminescens subsp. laumondii containing
D-glycero-D-manno-heptose and 3,6-dideoxy-3-formamido-D-glucose. Carbohydr.
Res., 351, 134-137.
604. Zdorovenko,E.L., Valueva,O.A., Varbanets,L.D., Shashkov,A.S., Knirel,Y.A.
(2012) Structure of the O-antigen of Budvicia aquatica 20186, a new bacterial
polysaccharide that contains 3,6-dideoxy-4-C-[(S)-1-hydroxyethyl]-D-xylo-hexose
(yersiniose A). Carbohydr. Res., 352, 219-222.
605. Perepelov,A.V., Wang,Q., Senchenkova,S.N., Gong,Y., Shashkov,A.S.,
Wang,L., Knirel,Y.A. (2012) Structure and gene cluster of the O-antigen of
Escherichia coli O120. Carbohydr. Res., 353, 106-110.
606. Arbatsky,N.P., Sun,Y., Shashkov,A.S., Wang,M., Liu,B., Daeva,E.D.,
Wang,L., Knirel,Y.A. (2012) Structure and genetics of the O-antigen of
Cronobacter sakazakii G2726 (serotype O3) closely related to the O-antigen of
C. muytjensii 3270. Carbohydr. Res., 355, 50-55.
607. Katzenellenbogen,E., Kocharova,N.A., Toukach,P.V., Gуrska,S.,
Bogulska,M., Gamian,A., Knirel,Y.A. (2012) Structures of a unique
O-polysaccharide of Edwardsiella tarda PCM 1153 containing an amide of
galacturonic acid with 2-aminopropane-1,3-diol and an abequose-containing
O-polysaccharide shared by E. tarda PCM 1145, PCM 1151 and PCM 1158. Carbohydr.
Res., 355, 56-62.
608. Boyko,A.S., Dmitrenok,A.S., Fedonenko,Y.P., Zdorovenko,E.L., Konnova,S.A.,
Knirel,Y.A., Ignatov,V.V. (2012) Structural analysis of the O-polysaccharide of
the lipopolysaccharide from Azospirillum brasilense Jm6B2 containing
3-O-methyl-D-rhamnose (D-acofriose). Carbohydr. Res., 355, 92-95.
609. Valueva,O.A., Zdorovenko,E.L., Varbanets,L.D., Shashkov,A.S.,
Shubchinskiy,V.V., Knirel,Y.A. (2012) Structural studies of the
O-polysaccharide of Pragia fontium 97U124 containing
2-acetamido-2,4,6-trideoxy-4-(D-glyceroyl)amino-D-glucose. Carbohydr. Res.,
355, 96-99.
610. Zdorovenko,E.L., Valueva,O.A., Kachala,V.V., Shashkov,A.S., Knirel,Y.A.,
Komaniecka,I., Choma,A. (2012) Structure of the O-polysaccharide of
Azorhizobium caulinodans HAMBI 216; identification of 3-C-methyl-D-rhamnose as
a component of bacterial polysaccharides. Carbohydr. Res., 358, 106-109.
611. Kondakova,A.N., Novototskaya-Vlasova,K.A., Shashkov,A.S., Drutskaya,M.S.,
Senchenkova,S.N., Shcherbakova,V.A., Gilichinsky,D.A., Nedospasov,S.A.,
Knirel,Y.A. (2012) Structure of an acidic polysaccharide isolated from
Psychrobacter maritimus 3pS containing a bacillosamine derivative. Carbohydr.
Res., 359, 7-10.
612. Katzenellenbogen,E., Kocharova,N.A.,
Gorska-Fraczek,S., Gamian,A., Shashkov,A.S., Knirel,Y.A. (2012) Structural and
serological studies on the O-antigen show that Citrobacter youngae
PCM1505 must be classified to a new Citrobacter O-serogroup. Carbohydr.
Res., 360, 52-55.
613. Ovchinnikova,O.G., Kondakova,A.N., Kocharova,N.A., Shashkov,A.S.,
Knirel,Y.A., Rozalski,A. (2012) Structure of the O-polysaccharide of
Providencia alcalifaciens O3 containing 3,6-dideoxy-3-formamido-D-glucose and
D-galacturonamide. Carbohydr. Res., 361, 27-32.
614. Perepelov,A.V., Wang,Q., Senchenkova,S.N., Gong,Y., Shashkov,A.S.,
Wang,L., Knirel,Y.A. (2012) Structure and gene cluster of the O-antigen of
Escherichia coli O102. Carbohydr. Res., 361, 73-77.
615. Belyakov,A.Y., Burygin,G.L., Arbatsky,N.P., Shashkov,A.S., Selivanov,N.Y.,
Matora,L.Y., Knirel,Y.A., Shchyogolev,S.Y. (2012) Identification of an O-linked
repetitive glycan chain of the polar flagellum flagellin of Azospirillum
brasilense Sp7. Carbohydr. Res., 361, 127-132.
616. Ovchinnikova,O.G., Kocharova,N.A.,
Bialczak-Kokot,M., Shashkov,A.S., Rozalski,A., Knirel,Y.A. (2012) Structure of
the O-polysaccharide of Providencia alcalifaciens O22 containing D-glyceramide
2-phosphate. Eur. J. Org. Chem., 3500-3506.
617. Perepelov,A.V., Shekht,M.E., Liu,B., Shevelev,S.D., Ledov,V.A.,
L'vov,V.L., Senchenkova,S.N., Shashkov,A.S., Feng,L., Aparin,P.G., Wang,L.,
Knirel,Y.A. (2012) Shigella flexneri O-antigens revisited: final elucidation of
the O-acetylation profiles and a survey of the O-antigen structure diversity. FEMS
Immunol. Med. Microbiol., 66, 201-210.
618. Sun,Y., Arbatsky,N.P., Wang,M., Shashkov,A.S., Liu,B., Wang,L.,
Knirel,Y.A. (2012) Structure and genetics of the O-antigen of Cronobacter
turicensis G3882 from a new serotype, C. turicensis O2, and identification of a
serotype-specific gene. FEMS Immunol. Med. Microbiol., 2012, 66, 323-333.
619. Ovchinnikova,O.G., Liu,B., Guo,D., Kocharova,N.A., Bialczak-Kokot,M.,
Shashkov,A.S., Feng,L., Rozalski,A., Wang,L., Knirel,Y.A. (2012) Structural,
serological, and genetic characterization of the O-antigen of Providencia
alcalifaciens O40. FEMS Immunol. Med. Microbiol., 2012, 66, 382-392.
620. Wang,Q., Perepelov,A.V. Wen,L., Shashkov,A.S., Wang,X., Guo,X., Wang,L.,
Knirel,Y.A. (2012) Identification of the two glycosyl transferase genes
responsible for the difference between Escherichia coli O107 and O117
O-antigens. Glycobiology, 22, 281-287.
621. Liu,B., Chen,M., Perepelov,A.V., Liu,J., Ovchinnikova,O.G., Zhou,D.,
Feng,L., Rozalski,A., Knirel,Y.A., Wang,L. (2012) Genetic analysis of the
O-antigen of Providencia alcalifaciens O30 and biochemical characterization of
a formyltransferase involved in the synthesis of a Qui4N derivative.
Glycobiology, 22, 1236-1244.
622. Wang,Q., Perepelov,A.V., Beutin,L., Senchenkova,S.N., Xu,Y.,
Shashkov,A.S., Ding,P., Knirel,Y.A., Feng,L. (2012) Structural and genetic
characterization of the Escherichia coli O180 O antigen and identification of a
UDP-GlcNAc 6-dehydrogenase. Glycobiology, 22, 1321-1331.
623. Wang,Q., Perepelov,A.V., Xu,Y, Knirel,Y.A., Reeves,P.R., Shashkov,A.S.,
Ding,P., Guo,X., Feng,L. (2012) Characterization of the CDP-D-mannitol
biosynthetic pathway in Streptococcus pneumoniae 35A. Glycobiology, 22,
1760-1767.
624. Kondakova A.N., Novototskaya-Vlasova K.A., Arbatsky N.P., Drutskaya M.S.,
Shcherbakova V.A., Shashkov A.S., Gilichinsky D.A., Nedospasov S.A., Knirel
Y.A. (2012) Structure of the O-specific polysaccharide from the
lipopolysaccharide of Psychrobacter cryohalolentis K5T containing a
2,3,4-triacetamido-2,3,4-trideoxy-L-arabinose moiety. J. Nat. Prod., 75,
2236-2240.
625. Ovchinnikova,O.G., Liu,B., Guo,D., Kocharova,N.A., Shashkov,A.S., Chen,M.,
Feng,L., Rozalski,A., Knirel,Y.A., Wang,L. (2012) Localization and molecular
characterization of putative O-antigen gene clusters of Providencia species.
Microbiology, 158, 1024-1036.
626. Wang,Q., Xu,Y., Perepelov,A., Knirel,Y., Reeves,P.R., Shashkov,A., Guo,X.,
Ding,P., Feng,L. (2012) Biochemical characterization of the CDP-D-arabinitol
biosynthetic pathway in Streptococcus pneumoniae 17F. J. Bacteriol., 194,
1868-1874.
627. Jimenez,N., Senchenkova,S.N., Knirel,Y.A., Pieretti,G., Corsaro,M.M.,
Aquilini,E., Regue,M., Merino,S., Tomas,J.M. (2012) Effects of LPS biosynthesis
mutations on K1 polysaccharide association with the Escherichia coli cell
surface. J. Bacteriol., 194, 3356-3367.
628. Merino,S., Bouamama,L., Knirel,Y.A., Senchenkova,S.N., Regue,M.,
Tomas,J.M. (2012) Aeromonas surface glucan attached through the O-antigen
ligase represents a new way to obtain UDP-glucose. PLoS One, 7 (5), e35707.
629. Sun,Q., Knirel,Y.A., Lan,R., Wang,J., Senchenkova,S.N., Jin,D.,
Shashkov,A.S., Xia,S., Perepelov,A.V., Chen,Q., Wang,Y., Wang,H., Xu,J. (2012)
A novel plasmid-encoded serotype conversion mechanism through addition of
phosphoethanolamine to the O-antigen of Shigella flexneri. PLoS One, 7 (9),
e46095.
630. Ittig,S., Lindner,B., Stenta,M., Manfredi,P., Zdorovenko,E., Knirel,Y.A.,
del Peraro,M., Cornelis,G.R., Zдhringer,U. (2012) The
lipopolysaccharide from Capnocytophaga canimorsus reveals an unexpected role of
the core-oligosaccharide in MD-2 binding. PLoS Pathog., 8 (5), e1002667.
631. Knirel,Y.A., Anisimov, A.P. (2012)
Lipopolysaccharide of Yersinia pestis, the cause of plague: structure,
genetics, biological properties. Acta Naturae, 4, 49-61 [In Russian; English
translation: 4, 16-28].
2013
632. Katzenellenbogen,E., Kocharova,N.A., Pietkiewicz,J., Gamian,A.,
Shashkov,A.S., Knirel,Y.A. (2013) Studies on the O-antigen of Hafnia alvei PCM
1224 structurally and serologically related to the O-antigen of H. alvei 481-L.
Carbohydr. Res., 367, 5-9.
633. Perepelov,A.V., Wang,Q., Senchenkova,S.N., Feng,L., Shashkov,A.S.,
Wang,L., Knirel,Y.A. (2013) Structure and gene cluster of the O-antigen of
Escherichia coli O110 containing an amide of D-galacturonic acid with
D-allothreonine. Carbohydr. Res., 368, 57-60.
634. Katzenellenbogen,E., Kocharova,N.A.,
Shashkov,A.S., Gyrska-Fraczek,S., Bogulska,M., Gamian,A., Knirel,Y.A. (2013)
Structure of the O-polysaccharide of Edwardsiella tarda PCM 1150 containing an
amide of D-glucuronic acid with L-alanine. Carbohydr. Res., 368, 84-88.
635. Sigida,E.N., Fedonenko,Y.P., Zdorovenko,E.L., Konnova,S.A., Shashkov,A.S.,
Ignatov,V.V., Knirel,Y.A. (2013) Structure of repeating units of a
polysaccharide(s) from the lipopolysaccharide of Azospirillum brasilense SR80.
Carbohydr. Res., 371, 40-44.
636. Valueva,V.A., Shashkov,A.S., Zdorovenko,E.L., Chizhov,A.O., Kiseleva,E.,
Novik,G., Knirel,Y.A. (2013) Structures of cell-wall phosphate-containing
glycopolymers of Bifidobacterium longum BIM B-476-D. Carbohydr. Res., 373,
22-27.
637. Shashkov,A.S., Senchenkova,S.N., Sun,Q., Lan,R., Wang,J., Perepelov,A.V.,
Knirel,Y.A., Xu,J. (2013) Structure of the O-antigen of a novel Shigella
flexneri serotype, 1d (I: 7,8). Carbohydr. Res. 373, 93-96.
638. Katzenellenbogen,E., Kocharova,N.A.,
Shashkov,A.S., Gorska-Fraczek,S., Gamian,A., Knirel,Y.A. (2013) Structure of
the O-polysaccharide of Edwardsiella tarda PCM 1156. Carbohydr. Res. 374,
45-48.
639. Ovchinnikova,O.G., Valueva,O.A., Kocharova,N.A., Arbatsky,N.P.,
Maszewska,A., Zablotni,A., Shashkov,A.S., Rozalski,A., Knirel,Y.A. (2013)
Structure of the O-polysaccharide of Providencia alcalifaciens O35 containing
an N-[(S)-1-carboxyethyl]-L-alanine (alanopine) derivative of 4-amino-4,6-dideoxyglucose.
Carbohydr. Res., 375, 73-78.
640. Perepelov,A.V., Wang,Q., Senchenkova,S.N., Feng,L., Shashkov,A.S.,
Wang,L., Knirel,Y.A. (2013) Structure and gene cluster of the O-antigen of
Escherichia coli O76. Carbohydr. Res., 377, 14-17.
641. Perepelov,A.V., Wang,Q., Senchenkova,S.N., Feng,L., Shashkov,A.S.,
Wang,L., Knirel,Y.A. (2013) Structure and gene cluster of the O-antigen of
Escherichia coli O154. Carbohydr. Res., 379, 51-54.
642. Arbatsky,N.P., Drzewiecka,D., Palusiak,A., Shashkov,A.S., Zablotni,A.,
Siwinska,M., Knirel,Y.A. (2013) Structure of a Kdo-containing O polysaccharide
representing Proteus O79, a newly described serogroup for some clinical Proteus
genomospecies isolates from Poland. Carbohydr. Res., 379, 100-105.
643. Sigida,E.N., Fedonenko,Y.P., Shashkov,A.S.,
Zdorovenko,E.L., Konnova,S.A., Ignatov,V.V., Knirel,Y.A. (2013) Structural
studies of the O-specific polysaccharide(s) from the lipopolysaccharide of
Azospirillum brasilense type strain Sp7. Carbohydr. Res., 380, 76-80.
644. Kondakova,A.N., Drutskaya,M.S., Shashkov,A.S., Nedospasov,S.A.,
Akimov,V.N., Arbatsky,N.P., Galchenko,V.F., Knirel,Y.A. (2013) Structure of the
O-polysaccharide of Pseudomonas mandelii CYar1 containing
3,6-dideoxy-4-C-[(S)-1-hydroxyethyl]-D-xylo-hexose (yersiniose A). Carbohydr.
Res., 381, 138-141.
645. Knirel,Y.A., Lan,R. Senchenkova,S.N., Wang,J., Shashkov,A.S., Wang,Y.,
Perepelov,A.V., Xiong,Y., Xu,J., Sun,Q. (2013) O-antigen structure of Shigella
flexneri serotype Yv and effect of the lpt-O gene variation on phosphoethanolamine
modification of S. flexneri O-antigens. Glycobiology, 23, 475-485.
646. Siwinska,M., Shashkov,A.S., Kondakova,A.N., Drzewiecka,D., Zablotni,A.,
Arbatsky,N.P., Valueva,O.A., Zych,K., Sidorczyk,Z., Knirel,Y.A. (2013)
Structure of the alanopine-containing O-polysaccharide and serological
cross-reactivity of the lipopolysaccharide of Proteus vulgaris HSC 438
classified into a new Proteus serogroup, O76. Microbiology, 159, 1036-1043.
647. Merino,S., Knirel,Y.A., Regue,M., Tomas,J.M. (2013) Experimental
identification of Actinobacillus pleuropneumoniae strains L20 and JL03
heptosyltransferases, evidence for a new heptosyltransferase signature
sequence. PLoS ONE, 8 (1), e55546.
648. Sun,Q., Lan,R., Wang,J., Xia,S., Wang,Y., Wang,Y., Jin,D., Yu,B.,
Knirel,Y.A., Xu,J. (2013) Identification and characterization of a novel
Shigella flexneri serotype Yv in China. PLoS ONE 8 (7), e70238.
649. Kiseleva,E.P., Mikhailopulo,K.I., Novik,G.I., Szwajcer Dey,E.,
Zdorovenko,E.L., Shashkov,A.S., Knirel,Y.A. (2013) Isolation and structural
identification of glycopolymers of Bifidobacterium bifidum BIM B-733D as
putative players in pathogenesis of autoimmune thyroid diseases. Beneficial
Microbes, 4, 375-391.
650. Ovchinnikova,O.G., Rozalski,A., Liu,B.,
Knirel,Y.A. (2013) O-Antigens of bacteria of the genus Providencia: structure,
serology, genetics, and biosynthesis. Biokhimiya, 78, 1023-1045 [In Russian;
English translation: Biochemistry (Moscow), 78, 798-817].
651. Knirel, Y.A., Valvano, M.A. (2013) Bacterial polysaccharide structure and
biosynthesis. In Encyclopedia of biophysics (Roberts, G.C.K., ed.) pp. 162-168,
Springer.
2014
652. Perepelov,A.V., Wang,M., Filatov,A.V., Guo,X.,
Shashkov,A.S., Wang,L., Knirel,Y.A. (2014) Structural and genetic studies of
the O-antigen of Enterobacter cloacae G2277. Carbohydr. Res., 387, 10-13.
653. Perepelov,A.V., Filatov,A.V., Wang,Q., L'vov,V.L., Quan,Y., Shashkov,A.S.,
Wang,L., Knirel,Y.A. (2014) Structure elucidation and gene cluster annotation
of the O-antigen of Escherichia coli O39; application of anhydrous
trifluoroacetic acid for selective cleavage of glycosidic linkages. Carbohydr.
Res., 388, 30-36.
654. Perepelov,A.V., Hao,X., Senchenkova,S.N.,
Shashkov,A.S., Liu,B., Wang,L., Knirel Y.A. (2014) Structure and gene cluster
of the O-antigen of Escherichia coli O30. Carbohydr.Res.,
389, 196-198.
655. Perepelov,A.V., Wang,Q., Levina,E.A., Ovchinnikova,O.G., Quan,Y.,
Shashkov,A.S., Wang,L., Knirel,Y A. (2014) Structure and gene cluster of the
O-antigen of Escherichia coli O36. Carbohydr. Res., 390, 46-49.
656. Ovchinnikova,O.G., Shashkov,A.S., Chizhov,A.O.,
Moryl,M., Rozalski,A., Knirel,Y.A. (2014) Structure of the O-polysaccharide
from the lipopolysaccharide of Providencia alcalifaciens O33. Carbohydr. Res.,
390, 67-70.
657. Senchenkova,S.N., Shashkov,A.S., Shneider,M.M., Arbatsky,N.P.,
Popova,A.V., Miroshnikov,K.A., Volozhantsev,N.V., Knirel,Y.A. (2014) Structure
of the capsular polysaccharide of Acinetobacter baumannii ACICU containing
di-N-acetylpseudaminic acid. Carbohydr. Res., 391, 89-92.
658. Filatov,A.V., Wang,M., Wang,W., Perepelov,A.V., Shashkov,A.S., Wang,L.,
Knirel,Y.A. (2014) Structure and genetics of the O-antigen of Enterobacter
cloacae C6285 containing di-N-acetyllegionaminic acid. Carbohydr. Res., 392,
21-24.
659. Jiang,L., Perepelov,A.V., Filatov,A.V., Liu,B., Shashkov,A.S.,
Senchenkova,S.N., Wang,L., Knirel,Y.A. (2014) Structure and gene cluster of the
O-antigen of Escherichia coli O68. Carbohydr. Res., 397, 27-30.
660. Sigida,E.N., Fedonenko,Y.P., Shashkov,A.S., Grinev,V.S., Zdorovenko,E.L.,
Konnova,S.A., Knirel, Y.A. (2014) Structural studies of the polysaccharides
from the lipopolysaccharides of Azospirillum brasilense Sp246 and SpBr14.
Carbohydr. Res., 398, 40-44.
661. Ovchinnikova,O.G., Shashkov,A.S., Moryl,M.,
Liu,B., Rozalski,A., Knirel,Y. A. (2014) Structure and gene cluster
organization of the O-antigen of Providencia alcalifaciens O45:H25. Carbohydr.
Res., 398, 72-76.
662. Liu,B., Knirel,Y.A., Feng,L., Perepelov,A.V., Senchenkova,S.N., Reeves,P.,
Wang,L. (2014) Structural diversity in Salmonella O antigens and its genetic
basis. FEMS Microbiol. Rev., 38, 56-89.
663. Knirel,Y.A., Gabius,H.-J., Blixt,O., Rapoport,E.M., Khasbiullina,N.R.,
Shilova,N.V., Bovin,N.V. (2014) Human tandem-repeat-type galectins bind
bacterial non-βGal polysaccharides. Glycoconj. J., 31, 7-12.
664. Sun,Q,. Knirel,Y.A., Lan,R., Wang,J.,
Senchenkova,S.N., Shashkov,A.S., Wang,Y., Wang,Y., Luo,X., Xu,J. (2014)
Dissemination and serotype modification potential of pSFxv_2, an O-antigen PEtN
modification plasmid in Shigella flexneri. Glycobiology, 24, 305-313.
665. Kiseleva,E.P., Mikhailopulo,K.I., Novik,G.I., Szwajcer Dey,E.,
Zdorovenko,E.L., Shashkov,A.S., Knirel ,Y.A. (2014) Glycopolymers from
Saccharomyces cerevisiae BIM Y-195 with unusual immunochemical properties:
isolation, structural identification and prediction of their role in
pathogenesis/treatment of autoimmune thyroid diseases. Res. Immunol. Int. J.,
2014, Article ID 355367.
666. Zdorovenko,E.L., Varbanets,L.D., Liu,B., Valueva,O.A., Wang,Q.,
Shashkov,A.S., Garkavaya,E.G., Brovarskaya,O.S., Wang,L., Knirel,Y.A. (2014)
Structure and gene cluster of the O-antigen of Escherichia coli L-19, a
candidate strain for a new O-serogroup. Microbiology, 160, 2102-2107.
667. Wang,J., Knirel,Y.A., Lan,R., Senchenkova,S.N., Luo,X., Perepelov,A.V.,
Wang,Y., Shashkov,A.S., Xu,J., Sun,Q. (2014) Identification of an
O-acyltransferase gene (oacB) that mediates 3- and 4-O-acetylation of rhamnose
III in Shigella flexneri O antigens. J. Bacteriol., 196, 1525-1531.
668. Sun,Q., Knirel,Y.A., Wang,J., Luo,X., Senchenkova,S.N., Lan,R.,
Shashkov,A.S., Xu,J. (2014) Serotype-converting bacteriophage SfII encodes an
acyltransferase protein that mediates 6-O-acetylation of GlcNAc in Shigella
flexneri O antigens, conferring on the host a novel O-antigen epitope. J.
Bacteriol., 196, 3656-3666.
669. Knirel,Y A., Wang,J., Luo,X., Senchenkova,S.N., Lan,R., Shpirt,A.M.,
Du,P., Shashkov,A.S., Zhang N., Xu,J., Sun,Q. (2014) Genetic and structural
identification of an O-acyltransferase gene (oacC) responsible for the
3/4-O-acetylation on rhamnose III in Shigella flexneri serotype 6. BMC Microbiol., 14, 266.
670. Wang,J., Lan,R., Knirel,Y.A., Luo,X., Wang,Y., Senchenkova,S.N.,
Shashkov,A.S., Xu,J., Sun, Q. (2014) Serological identification and prevalence
of a novel O-antigen epitope linked to 3- and 4-O-acetylated rhamnose III of
lipopolysaccharide in Shigella flexneri. J. Clin. Microbiol., 52, 2033-2038.
671. Aquilini,E., Merino,S., Knirel,Y.A., Regue,M.,
Tomas,J.M. (2014) Functional identification of Proteus mirabilis eptC gene
encoding a core lipopolysaccharide phosphoethanolamine transferase. Int. J.
Mol. Sci., 15, 6689-6702.
672. Stowell,S.R., Arthur,C.M., McBride,R., Berger,O., Razi,N.,
Heimburg-Molinaro,J., Rodrigues,L.C., Gourdine,J.-P., Noll,A.J., von Gunten,S.,
Smith,D.F., Knirel,Y.A., Paulson,J.C., Cummings,R.D. (2014) Microbial glycan
microarrays define key features of host-microbial interactions. Nat. Chem.
Biol., 10, 470-476.
673. Korneev,K.V., Kondakova,A.N., Arbatsky,N.P., Novototskaya-Vlasova,K.A.,
Rivkina,E.M., Anisimov,A.P., Kruglov,A.A., Kuprash,D.V., Nedospasov,S.A.,
Knirel,Y.A., Drutskaya,M.S. (2014) Distinct biological activity of
lipopolysaccharides with different lipid A acylation status from mutant strains
of Yersinia pestis and some members of genus Psychrobacter. Biokhimiya, 79,
1629-1635 [In Russian; English translation: Biochemistry (Moscow), 79,
1333-1338].
2015
674. Ovchinnikova,O.G., Moryl,M., Shashkov,A.S., Chizhov,A.O., Arbatsky,N.P.,
Shpirt,A.M., Rozalski,A., Knirel,Y.A. (2015) Structure of the O-polysaccharide
of Providencia alcalifaciens O2 containing ascarylose and
N-(L-alanyl)-D-glucosamine. Carbohydr. Res., 401, 11-15.
675. Arbatsky,N.P., Shashkov,A.S., Kirsheva,N.A., Kondakova,A.N., Shaikhutdinova,R.Z.,
Ivanov,S.A., Anisimov,A.P., Knirel,Y.A. (2015) Structure of the
O-polysaccharide of Photorhabdus temperata subspsp. temperata
XlNachT containing a novel branched monosaccharide,
3,6-dideoxy-4-C-[(S)-1,2-dihydroxyethyl]-D-xylo-hexose. Carbohydr. Res., 403,
202-205.
676. Perepelov,A.V., Wang,Q., Senchenkova,S.N., Qian,Y., Shashkov,A.S.,
Wang,L., Knirel,Y.A. (2015) Structural and genetic studies of the O-antigen of
Escherichia coli O163. Carbohydr. Res., 404, 34-38.
677.Shashkov,A.S., Shneider,M.M., Senchenkova,S.N., Popova,A.V., Nikitina,A.S.,
Babenko,V.V., Kostryukova,E.S., Miroshnikov,K.A., Volozhantsev,N.V.,
Knirel,Y.A. (2015) Structure of the capsular polysaccharide of Acinetobacter
baumannii 1053 having the KL91 capsule biosynthesis gene locus. Carbohydr.
Res., 404, 79-82.
678 Zdorovenko,E.L., Shashkov,A.S., Zhurina,M.V.,
Plakunov,V.K., Knirel,Y.A. (2015) Structure of the O-specific polysaccharides
from planktonic and biofilm cultures of Pseudomonas chlororaphis 449.
Carbohydr. Res., 404, 93-97.
679. Shashkov,A.S., Wang,M., Turdymuratov,E.M., Hu,S.,
Arbatsky,N.P., Guo,X., Wang,L., Knirel,Y.A. (2015) Structural and genetic
relationships of closely related O-antigens of Cronobacter spp. and Escherichia
coli: C. sakazakii G2594 (serotype O4)/E. coli O103 and C. malonaticus G3864
(serotype O1)/E. coli O29. Carbohydr. Res., 404, 124-131.
680. Arbatsky,N.P., Wang,M., Turdymuratov,E.M., Hu,S., Shashkov,A.S., Wang,L.,
Knirel,Y.A. (2015) Related structures of the O-polysaccharides of Cronobacter
dublinensis G3983 and G3977 containing
3-(N-acetyl-L-alanyl)amino-3,6-dideoxy-D-galactose. Carbohydr. Res., 404,
132-137.
681. Kondakova,A.N., Kirsheva,N.A., Arbatsky,N.P., Shaikhutdinova,R.Z.,
Shashkov,A.S., Ivanov,S.A., Anisimov,A.P., Knirel,Y.A. (2015) Structure of a
zwitterionic O-polysaccharide from Photorhabdus temperata subsp. ñinerea 3240.
Carbohydr. Res., 407, 1-4.
682. Perepelov,A.V., Wang,M., Filatov,A.V., Guo,X., Shashkov,A.S., Wang,L.,
Knirel,Y.A. (2015) Structure and genetics of the O-antigen of Enterobacter
cloacae G3054 containing di-N-acetylpseudaminic acid. Carbohydr. Res., 407,
59-62.
683. Siwinska,M., Levina,E.A., Ovchinnikova,O.G., Drzewiecka,D., Shashkov,A.S., Rozalski,A., Knirel,Y.A. (2015) Classification of a Proteus penneri
clinical isolate with a unique O-antigen structure to a new Proteus serogroup,
O80. Carbohydr. Res., 407, 131-136.
684. Senchenkova,S.N., Popova,A.V., Shashkov,A.S., Shneider,M.M., Mei,Z.,
Arbatsky,N.P., Liu,B., Miroshnikov,K.A., Volozhantsev,N.V., Knirel,Y.A. (2015)
Structure of a new pseudaminic acid-containing capsular polysaccharide of
Acinetobacter baumannii LUH5550 having the KL42 capsule biosynthesis locus.
Carbohydr. Res., 407, 154-157.
685. Senchenkova,S.N., Shashkov,A.S., Popova,A.V., Shneider,M.M.,
Ovchinnikova,O.G., Miroshnikov,K.A., Volozhantsev,N.V., Knirel,Y.A. (2015)
Structure elucidation of the capsular polysaccharide of Acinetobacter baumannii
AB5075 having the KL25 capsule biosynthesis locus. Carbohydr. Res., 408, 8-11.
686. Perepelov,A.V., Wang,Q., Filatov,A.V., Xia,X., Shashkov,A.S.,
Weintraub,A., Widmalm,G., Wang,L., Knirel,Y.A. (2015) Structures and gene
clusters of the closely related O-antigens of Escherichia coli O46 and O134,
both containing D-glucuronoyl-D-allothreonine. Carbohydr. Res., 409, 20-24. Corrigendum in: Carbohydr. Res., 436, 54 (2016).
687. Zdorovenko,E.L., Varbanets,L.D., Shashkov,A.S., Kiprianova,E.A.,
Knirel,Y.A. (2015) Structure of the O-polysaccharide of the lipopolysaccharide
of Pseudomonas chlororaphis subsp. aurofaciens UCM B-306. Carbohydr. Res., 410,
47-50.
(2016)
688. Perepelov,A.V., Wang,Q., Senchenkova,S.N., Mei,Z., Shashkov,A.S., Wang,L.,
Knirel,Y.A. (2015) Structure and gene cluster of the O-antigen of Escherichia
coli O140. Carbohydr. Res., 411, 33-36.
689. Zdorovenko,E.L., Golomidova,A.K., Prokhorov,N.S., Shashkov,A.S., Wang,L.,
Letarov,A.V., Knirel,Y.A. (2015) Structure of the O-polysaccharide from
Escherichia coli HS1/2 and type strain of E. coli O87. Carbohydr. Res., 412,
15-18.
690. Arbatsky,N.P., Shneider,M.M., Kenyon,J.J., Shashkov,A.S., Popova,A.V.,
Miroshnikov,K.A., Volozhantsev,N.V., Knirel,Y.A. (2015) Structure of the
neutral capsular polysaccharide of Acinetobacter baumannii NIPH146 that carries
the KL37 capsule gene cluster. Carbohydr. Res., 413, 12-15.
691. Perepelov,A.V., Shashkov,A.S., Guo,X., Filatov, A.V., Widmalm,G., Knirel,Y. A.. (2015) Structure and genetics of the O-antigen of Escherichia coli O169 related to the O-antigen of Shigella boydii type 6. Carbohydr. Res., 414, 46-50.
692.Perepelov,A.V., Guo,X., Filatov,A.V., Shashkov,A.S., Liu,B., Knirel,Y.A. (2015) Structure and gene cluster of the O-antigen of Escherichia coli O43. Carbohydr. Res., 416, 32-36.
693. Sigida,E.N., Fedonenko,Y.P., Shashkov,A.S., Zdorovenko,E.L., Konnova,S.A., Ignatov,V.V., Knirel,Y.A. (2015) Structure of the polysaccharides from the lipopolysaccharide of Azospirillum brasilense Jm125A2. Carbohydr. Res., 416, 37-40.
694. Shashkov,A.S., Wang,T., Perepelov,A.V., Weintraub,A., Liu,B., Widmalm,G., Knirel,Y. A. (2015) Structure elucidation and biosynthesis gene cluster organization of the O-antigen of Escherichia coli O170. Carbohydr. Res., 417, 11-14.
695. Shashkov,A.S., Kenyon,J.J., Arbatsky,N.P., Shneider,M.M., Popova,A.V., Miroshnikov,K.A., Volozhantsev,N.V., Knirel,Y.A. (2015) Structures of three different neutral polysaccharides of Acinetobacter baumannii, NIPH190, NIPH201, and NIPH615 assigned to K30, K45, and K48 capsule types, respectively, based on capsule biosynthesis gene clusters. Carbohydr. Res., 417, 81-88.
696. Perepelov,A.V., Guo,X., Senchenkova,S.N., Shashkov,A.S., Knirel,Y.A. (2015) Structure and genetics of biosynthesis of the phosphate-containing O-polysaccharide of Escherichia coli O160. Carbohydr. Res., 417, 89-93.
697. Knirel,Y.A., Prokhorov,N.S., Shashkov,A.S., Ovchinnikova,O.G.,
Zdorovenko,E.L., Liu,B., Kostrukova,E.S., Larin,A.K., Golomidova,A.K.,
Letarov,A.V. (2015) Variations in the O-antigen biosynthesis and O-acetylation
associated with the altered phage sensitivity of Escherichia coli 4s. J. Bacteriol., 197, 905-912.
698. Wong,A., Lange,D.,Houle,S., Arbatsky,N.P., Valvano,M.A., Knirel,Y.A.,
Dozois,C.M., Creuzenet,C. (2015) Role of capsular modified heptose in the
virulence of Campylobacter jejuni. Mol. Microbiol., 96, 1136-1158.
699. Chen,M., Shpirt,A.M., Guo,X., Shashkov,A.S., Zhuang,Y., Wang,L., Knirel,Y.A., Liu,B. (2015) Identification serologically, chemically and genetically of two Escherichia coli strains as candidates for new O serogroups. Microbiology, 161, 1790-1796.
700. Korneev K.V., Arbatsky,N.P., Molinaro,A., Palmigiano,A., Shaikhutdinova,R.Z., Shneider,M.M., Pier,G.B., Kondakova,A.N., Sviriaeva,E.N., Sturiale,L., Garozzo,D., Kruglov,A.A., Nedospasov,S.A., Drutskaya,M.S., Knirel,Y.A., Kuprash,D.V. (2015) Structural relationship of the lipid A acyl groups to activation of murine Toll-like receptor 4 by lipopolysaccharides from pathogenic strains of Burkholderia mallei, Acinetobacter baumannii, and Pseudomonas aeruginosa. Front. Immunol., 6, Article 595.
701. Merino,S., Canals,R., Knirel,Y.A., Tomas,J.M. (2015) Molecular and chemical analysis of the lipopolysaccharide from Aeromonas hydrophila strain AH-1 (serotype O11). Mar. Drugs., 13, 2233-2249.
702. Ranf,S., Gisch,N., Schäffer,M., Illig,T., Westphal,L., Knirel,Y.A., Sanchez-Carballo,P.M., Zähringer,U., Hückelhoven,R., Lee,J., Scheel,D. (2015) A lectin S-domain receptor kinase mediates lipopolysaccharide sensing in Arabidopsis thaliana. Nat. Immunol., 16, 426-433.
703. Arbatsky,N.P., Wang,M., Turdymuratov,E.M., Kondakova,A.N., Shashkov,A.S., Knirel,Y.A. (2015) Structure of fructans from three strains of Cronobacter dublinensis. Izv. AN. Ser. Khim., 1192-1195 [In Russian; English translation: Russ. Chem. Bull., 64, 1192-1195].
704. Shashkov,A.S., Senchenkova,S.N., Popova,A.V., Mei,Z., Shneider,M.M., Liu,B., Miroshnikov,K.A., Volozhantsev,N.V., Knirel,Y.A. (2015) Revised structure of the capsular polysaccharide of Acinetobacter baumannii LUH5533 (serogroup O1) containing di-N-acetyllegionaminic acid. Izv. AN. Ser. Khim., 1196-1199 [In Russian; English translation: Russ. Chem. Bull., 64, 1196-1199].
705. Egorova,K.S., Kalinchuk,N.A., Knirel,Y.A., Toukach,F.V. (2015) Natural carbohydrate database (CSDB) - new features. Izv. AN. Ser. Khim., 1205-1210 [In Russian; English translation: Russ. Chem. Bull., 64, 1205-1210].
706. Knirel,Y.A., Sun,Q., Senchenkova,S.N., Lan,R., Perepelov,A.V., Xu,J. (2015) O-Antigen modifications providing the antigenic diversity of Shigella flexneri and underlying genetic mechanisms (a review). Biokhimiya, 80, 1072-1087. [In Russian; English translation: Biochemistry (Moscow), 80, 901-915].
2016
707. Sigida,E.N., Fedonenko,Y.P., Shashkov,A.S., Arbatsky,N.P., Zdorovenko,E.L., Konnova,S.A., Ignatov,V.V., Knirel, Y.A. (2016) Elucidation of a masked repeating structure of the O-specific polysaccharide of the halotolerant soil bacteria Azospirillum halopraeferens Au4. Beilstein J. Org. Chem., 12, 636-642.
708. Knirel,Y.A., Qian,C., Senchenkova,S.N., Guo,X., Shashkov,A.S., Chizhov,A.O., Perepelov,A.V., Liu,B. (2016) Structure of the β-L-fucopyranosyl phosphate-containing O-specific polysaccharide of Escherichia coli O84. Int. J. Biol. Macromol., 88, 578-585.
709. Guo,X., Senchenkova,S.N., Shashkov,A.S., Perepelov,A.V., Liu,B., Knirel,Y.A. (2016) Structure and gene cluster of the O-antigen of Escherichia coli O96. Carbohydr. Res., 420, 1-5.
710. Perepelov,A.V., Guo,X., Senchenkova,S.N., Li,Y., Shashkov,A.S., Liu,B., Knirel,Y.A. (2016) Structure and gene cluster of the O-antigen of Escherichia coli O137. Carbohydr. Res., 422, 13-16.
711. Shashkov,A.S., Yang,B., Senchenkova,S.N., Perepelov,A.V., Liu,B., Knirel,Y.A. (2016) Structures and genetics of biosynthesis of glycerol 1-phosphate-containing O-polysaccharides of Escherichia coli O28ab, O37, and O100. Carbohydr. Res., 426, 26-32.
712. Shashkov,A.S., Zhang,W., Perepelov,A.V., Weintraub,A., Liu,B., Widmalm,G., Knirel,Y.A. (2016) Structure of the O-polysaccharide of Escherichia coli O132. Carbohydr. Res., 427, 44-47.
713. Duan,Z., Senchenkova,S.N., Guo,X., Perepelov,A.V., Shashkov,A.S., Liu,B., Knirel,Y.A. (2016) Structure and gene cluster of the O-antigen of Escherichia coli O156 containing a pyruvic acid acetal. Carbohydr. Res., 430, 24-28.
714. Shashkov,A.S., Zhang,Y., Sun,Q., Guo,X., Senchenkova,S.N., Perepelov,A. V., Knirel,Y.A. (2016) Structure and gene cluster of the O-antigen of Escherichia coli O133. Carbohydr. Res., 430, 82-84.
715. Senchenkova,S.N., Guo,X., Filatov,A.V., Perepelov,A.V., Liu,B., Shashkov,A.S., Knirel,Y.A. (2016) Structure and gene cluster of the O-antigen of Escherichia coli O80. Carbohydr. Res., 432, 83-87.
716. Zdorovenko,E.L., Kadykova,A.A., Varbanets,L.D., Shashkov,A.S., Kiprianova,E.A., Brovarskaya,O.S., Knirel,Y.A. (2016) Structure of the O-specific polysaccharides of Pseudomonas chlororaphis subsp. chlororaphis UCM B-106. Carbohydr. Res., 433, 1-4.
717. Senchenkova,S.N., Guo,X., Naumenko,O.I., Shashkov,A.S., Perepelov,A.V., Liu,B., Knirel,Y.A. (2016) Structure and genetics of the O-antigens of Escherichia coli O182-O187. Carbohydr. Res., 435, 58-67.
718. Shashkov,A.S., Kenyon,J.J., Arbatsky,N.P., Shneider,M.M., Popova,A.V., Miroshnikov,K.A., Hall,R.M., Knirel,Y.A. (2016) Related structures of neutral capsular polysaccharides of Acinetobacter baumannii isolates that carry related capsule gene clusters KL43, KL47, and KL88. Carbohydr. Res., 435, 173-179.
719. Perepelov,A.V., Guo,X., Shashkov,A.S., Senchenkova,S.N., Liu,B., Knirel,Y.A. (2016) Structure elucidation and analysis of biosynthesis genes of the O-antigen of Escherichia coli O131 containing N-acetylneuraminic acid. Carbohydr. Res., 436, 41-44.
720. Senchenkova,S.N., Guo,X., Perepelov,A.V., Shashkov,A.S., Weintraub,A., Liu,B., Widmalm,G., Knirel,Y.A. (2016) Structure and gene cluster of the O-antigen of Escherichia coli O165 containing 5-N-acetyl-7-N-[(R)-3-hydroxybutanoyl]pseudaminic acid. Glycobiology, 26, 335-342.
721. Shashkov,A.S., Kenyon,J.J., Senchenkova,S.N., Shneider,M.M., Popova,A.V., Arbatsky,N.P., Miroshnikov,K.A., Volozhantsev,N.V., Hall,R.M., Knirel,Y.A. (2016) Acinetobacter baumannii K27 and K44 capsular polysaccharides have the same K unit but different structures due to the presence of distinct wzy genes in otherwise closely related K gene clusters. Glycobiology, 26, 501-508.
722. Wittmann,A., Lamprinaki,D., Bowels,K.M., Katzenellenbogen,E., Knirel,Y.A., Nishimura,K., Matsumoto,N., Yamamoto,K., Iwakura,Y., Saijo,S., Kawasaki,N. (2016) Dectin-2 recognises an O-antigen polysaccharide from a human opportunistic pathogen and augments LPS activation of myeloid cells. J. Biol. Chem., 291, 17629-17638.
723. Drzewiecka,D., Shashkov,A.S., Arbatsky,N.P., Knirel,Y. A. (2016) Immunochemical characterization of the O antigens of two Proteus spp. strains, 12 B-r of Proteus mirabilis O2 and O8-related 12 B-k of Proteus genomospecies 5/6, infecting a hospitalized patient in Poland. Microbiology, 162, 789-797.
724. Wang,M., Arbatsky,N.P., Xu,L., Shashkov,A.S., Wang,L., Knirel,Y.A. (2016) O antigen of Franconibacter pulveris G3872 (O1) is a 4-deoxy-D-arabino-hexose-containing polysaccharide synthesized by the ABC transporter-dependent pathway Microbiology, 162, 1103-1113.
725. Kenyon,J.J., Shneider,M.M., Senchenkova,S.N., Shashkov,A.S., Siniagina,M.N., Malanin,S.Y., Popova,A.V., Miroshnikov,K.A., Hall,R.M., Knirel,Y.A. (2016) K19 capsular polysaccharide of Acinetobacter baumannii is produced via a Wzy polymerase encoded in a small genomic island rather than the KL19 capsule gene cluster. Microbiology, 162, 1479-1489.
726. Drzewiecka,D., Arbatsky,N.P., Kondakova,A.N., Shashkov,A.S., Knirel,Y.A. (2016) Structures and serospecificity of threonine-containing O polysaccharides of two clinical isolates belonging to the genus Proteus and their classification into O11 subserogroups. J. Med. Microbiol., 65, 1260-1266.
727. Golomidova,A.K., Kulikov,E.E., Prokhorov,N.S., Guerrero-Ferreira,R.C., Knirel,Y.A., Kostryukova,E.S., Tarasyan,K.K., Letarov,A.V. (2016) Branched lateral tail fiber organization in T5-like bacteriophages DT57C and DT571/2 as revealed by genetic and functional analysis. Viruses, 8, Article 26.
728. Arbatsky,N.P., Shneider,M.M., Shashkov,A.S., Popova,A.V., Miroshnikov,K.A., Volozhantsev,N.V., Knirel,Y.A. (2016) Structure of a di-N-acetylpseudaminic acid-containing capsular polysaccharide from Acinetobacter baumannii NIPH67 belonging to type K33. Izv. AN. Ser. Khim., 588-591. [In Russian; English translation: Russ. Chem. Bull., 65, 588-591].
729. Sizova,O.V., Shashkov,A.S., Shaikhutdinova,R.Z., Ivanov,S.A., Dentovskaya,S.V., Knirel,Y.A. (2016) Structure of the O-polysaccharide of Yersinia frederiksenii H5636/81 (serotype O:60) containing 4-deoxy-D-arabino-hexose. Izv. AN. Ser. Khim., 1625-1629. [In Russian; English translation: Russ. Chem. Bull., 65, 1625-1629].
730. Senchenkova,S.N., Zhang,Y., Perepelov,A.V., Shashkov,A.S., Liu,B., Knirel,Y.A. (2016) Structure and biosynthesis gene cluster of the O-antigen of Escherichia coli O12. Biokhimiya, 81, 548-554. [In Russian; English translation: Biochemistry (Moscow), 81, 401-406].
731. Knirel,Y.A., Qian,C., Shashkov,A.S., Sizova,O.V., Zdorovenko,E.L., Naumenko,O.I., Senchenkova,S.N., Perepelov,A.V., Liu,B. (2016) Structural relationships between genetically closely related O-antigens of Escherichia coli and Shigella spp. Biokhimiya, 81, 785-794 [In Russian; English translation: Biochemistry (Moscow), 81, 600-608].
732. L’vov,V.L., Filatov,A.V., Perepelov,A.V., Shpirt,A.M., Shashkov,A.S., Chizhov,A.O., Knirel,Y.A. (2016) Solvolysis with trifluoroacetic acid: an efficient method for selective cleavage of polysaccharides. Mendeleev Commun., 26, 279-281.
2017
733. Han,R., Perepelov,A.V., Wang,Н., Filatov,A.V., Wang,M., Shashkov,A.S., Wang,L., Knirel,Y.A. (2017) Structural and genetic сharacterization of the O-antigen of Enterobacter cloacae C5529 related to the O-antigen of Enterobacter cloacae G3054. Carbohydr. Res., 443-444, 49-52.
734. Sizova O.V., Kondakova A.N., Shashkov A.S., Knirel Y.A., Shaikhutdinova R.Z., Ivanov S.A., Hurst M.R., Dentovskaya S.V. (2017) Structure and gene cluster of a tyvelose-containing O-polysaccharide of an entomopathogenic bacterium Yersinia entomophaga MH96 related to Yersinia pseudotuberculosis. Carbohydr. Res., 445, 93-97.
735. Zheng,H., Shashkov,A.S., Xiong,Y., Naumenko,O.I., Wang,H., Senchenkova,S.N., Wang,J., Knirel,Y.A. (2017) Structure and gene cluster of the O-antigen of Escherichia albertii O1 resembling the O antigen of Pseudomonas aeruginosa O5. Carbohydr. Res., 446-447, 38-41.
736. Sigida,E.N., Fedonenko, Y.P., Shashkov, A.S., Zdorovenko, E.L., Ignatov, V.V., Knirel,Y.A. (2017) Structural studies of the O-specific polysaccharide from detergent degrading bacteria Pseudomonas putida TSh-18. Carbohydr. Res., 448, 1-5.
737. Shashkov,A.S., Liu,B., Kenyon,J.J., Popova,A.V., Shneider,M.M., Senchenkova,S.N., Arbatsky,N.P., Miroshnikov,K.A., Wang,L., Knirel,Y.A. (2017) Structures of the K35 and K15 capsular polysaccharides of Acinetobacter baumannii LUH5535 and LUH5554 containing amino and diamino uronic acids. Carbohydr. Res., 448, 28-34.
738, Zdorovenko,E., Cimmino,A., Marchi,G., Shashkov,A.S., Fiori,M., Knirel,Y., Evidente, A.(2017) Studies on the O-specific polysaccharide of the lipopolysaccharide from the Pseudomonas mediterranea strain C5P1rad1, a bacterium pathogenic of tomato and chrysanthemum. Carbohydr. Res. 448, 48-51.
739. Perepelov,A.V., Xu,G., Filatov,A.V., Zhang,X., Shashkov,A.S., Wang,M., Knirel, Y.A. ( 2017) Structure and gene cluster of the O-antigen of Enterobacter cloacae C4115. Carbohydr. Res. 448, 110-114.
740. Naumenko,O.I, Zheng,H., Senchenkova,S.N., Wang,H., Li,Q., Shashkov,A.S., Wang,J., Knirel,Y.A., Xiong,Y. (2017) Structures and gene clusters of the O-antigens of Escherichia albertii O3, O4, O6, and O7. Carbohydr. Res., 449, 17-22.
741. Kenyon,J.J., Kasimova,A.A., Notaro,A., Arbatsky,N.P., Speciale,I., Shashkov,A.S., De Castro,C., Hall,R.M., Knirel,Y.A. (2017) Acinetobacter baumannii K13 and K73 capsular polysaccharides differ only in K-unit side branches of novel non-2-ulosonic acids: di-N-acetylated forms of either acinetaminic acid or 8-epiacinetaminic acid. Carbohydr. Res., 452, 149-155.
742. Zdorovenko,E.L., Kadykova,A.A., Shashkov,A.S., Varbanets,L.D., Bulyhina,T.V., Knirel,Y.A. (2017) Lipopolysaccharide of Pantoea agglomerans 7969: Chemical identification, function and biological activity. Carbohydr. Polym., 165, 351-358.
743. Kenyon,J.J., Shashkov,A.S., Senchenkova,S.N., Shneider,M.M., Liu,B., Popova,A.V., Arbatsky,N.P., Miroshnikov,K.A., Wang,L., Knirel,Y. A., Hall,R.M. (2017) Acinetobacter baumannii K11 and K83 capsular polysaccharides have the same 6-deoxy-L-talose-containing pentasaccharide K units but different linkages between the K units. Int. J. Biol. Macromol., 103, 648-655.
744. Hou,X., Perepelov,A.V., Guo,X., Senchenkova,S.N., Shashkov,A.S., Liu,B., Knirel,Y.A., Wang,L. (2017) A gene cluster at an unusual chromosomal location responsible for the novel O-antigen synthesis in Escherichia coli O62 by the ABC transporter-dependent pathway. Glycobiology, 27, 669-676.
745. Knirel,Y.A., Guo,X., Senchenkova,S.N., Perepelov,A.V., Liu,B., Shashkov,A.S. (2017) Structures and gene clusters of the O-specific polysaccharides of the lipopolysaccharides of Escherichia coli O69 and O146 containing glycolactilic acids: ether conjugates of D-GlcNAc and D-Glc with (R)- and (S)-lactic acid. Glycoconj. J., 34, 71-84.
746. Hanske,J., Schulze,J., Aretz,J., McBride,R., Loll,B., Schmidt,H., Knirel,Y., Rabsch,W., Wahl,M.C., Paulson,J.C., Rademacher,C. (2017) Bacterial polysaccharide specificity of the pattern recognition receptor Langerin is highly species dependent. J. Biol. Chem., 292, 862-871.
747. Zdorovenko, E.L., Shashkov,A.S., Kadykova,A.A., Fakhrutdinov,A.N., Kiseleva,E.P., Plotnikova,D.T., Novik, G.I., Knirel, Y.A. (2017) Structures of cell-wall glycopolymers of Lactococcus lactis BIM B-1024. EuroBiotech J., 1, 45-49.
748. Kenyon,J.J., Kasimova,A.A., Shneideк,M.M., Shashkov,A.S., Arbatsky,N.P., Popova,A.V., Miroshnikov,K.A., Hal, R.M., Knirel,Y.A. (2017) The KL24 gene cluster and a genomic island encoding a Wzy polymerase contribute genes needed for synthesis of the K24 capsular polysaccharide by the multiply antibiotic resistant Acinetobacter baumannii isolate RCH51. Microbiology, 163, 355-363.
749. Wang,X., Kondakova,A.N., Zhu,Y., Knirel, Y.A., Han, A. (2017) Structure and gene cluster of the O-antigen in Comamonas aquatica CJG. Microbiology, 163, 1637-1640.
750. Prokhorov,N.S., Riccio, C., Zdorovenko, E.L., Shneider, M.M., Browning, C., Knirel, Y.A., Leiman, P.G., Letarov, A.V. (2017) Function of bacteriophage G7C esterase tailspike in host cell adsorption. Mol. Microbiol., 105, 355-363.
751. Katzenellenbogen E., Staniszewska M., Kocharova N.A., Mieszala M., Korzeniowska-Kowal A., Gorska S., Knirel Y.A., Gamian A. (2017) Re-classification within the serogroups O3 and O8 of Citrobacter strains. BMC Microbiol., 17, 169. Erratum in: BMC Microbiol. 17, 173.
752. Yu,X., Torzewska,A., Zhang,X., Yin,Z., Drzewiecka,D., Cao,H., Liu,B., Knirel,Y.A., Rozalski,A., Wang,L. (2017) Genetic diversity of the O antigens of Proteus species and the development of a suspension array for molecular serotyping. PLoS ONE, 12, e0183267.
753. Olszak,T., Shneider,M.M., Latka,A., Maciejewska,B., Browning,C., Sycheva,L.V., Comer,J.E., Danis-Wlodarczyk,K., Senchenkova,S.N., Shashkov,A.S., Gula,G., Arabski,M., Wasik,S., Miroshnikov,K.A., Lavigne,R., Leiman, P.G., Knirel,Y.A., Drulis-Kawa,Z. (2017) The O-specific polysaccharide lyase from the phage LKA1 tailspike reduces Pseudomonas virulence. Sci.Rep., 7, 16302.
754. Shashkov,A.S., Senchenkova,S.N., Perepelov,A.V., Knirel,Y.A. (2017) Structure of the O-polysaccharides of Escherichia coli O162 containing 4-deoxy-D-arabino-hexose and structurally related O-polysaccharides of E. coli O101. Izv. AN. Ser. Khim., 732-734. [In Russian; English translation: Russ. Chem. Bull.Int.Ed.Eng., 66, 732-734].
755. Senchenkova S.N., Xu G., Qi Y., Perepelov A.V., Shashkov A.S., Liu B., Knirel Y.A. (2017) New fructan - the O-specific polysaccharide from Escherichia coli O92. Izv. AN. Ser. Khim., 1304-1307. [In Russian; English translation: Russ.Chem.Bull.Int.Ed.Eng., 66, 1304-1307].
756. Kasimova,A.A., Shneider,M.M., Arbatsky,N.P., Popova,A.V., Shashkov,A.S., Miroshnikov,K.A., Balaji,V., Biswas,I., Knirel,Y.A. (2017) Structure and gene cluster of the K93 capsular polysaccharide of Acinetobacter baumannii B11911 containing 5-N-acetyl-7-N-[(R)-3-hydroxybutanoyl]pseudaminic acid. Biokhimiya, 82, 655-663 [In Russian; English translation: Biochemistry (Moscow), 82, 483-489].
2018
757. Perepelov,A.V., Chen,T., Senchenkova,S.N., Filatov,A.V., Song,J., Shashkov,A.S., Liu,B., Knirel,Y.A. (2018) Structure and genetics of the O-specific polysaccharide of Escherichia coli O27. Carbohydr. Res., 456, 1-4.
758. Zdorovenko,E.L., Shashkov,A.S., Kadykova,A.A., Kiseleva,E.P., Savich,V.V., Novik,G.I., Knirel,Y.A. (2018) Structural analysis of the O-polysaccharide from the lipopolysaccharide of Pseudomonas putida BIM B-1100. Carbohydr. Res., 457, 8-13.
759. Naumenko,O.I., Zheng,H., Xiong,Y., Senchenkova,S.N., Wang,H., Shashkov,A.S., Chizhov,A.O., Li,Q., Knirel,Y.A., Wang,J. (2018) Structure elucidation of the O-specific polysaccharide by NMR spectroscopy and selective cleavage and genetic characterization of the O-antigen of Escherichia albertii O5. Carbohydr. Res., 457, 25-31.
760. Senchenkova,S.N., Hou,W., Naumenko,O.I., Geng,P., Shashkov,A.S., Perepelov,A.V., Yang,B., Knirel,Y.A. (2018) Structure and genetics of a glycerol 2-phosphate-containing O-specific polysaccharide of Escherichia coli O33. Carbohydr. Res., 460, 47-50.
761. Sizova,O.V., Shashkov,A.S., Kondakova,A.N., Knirel,Y.A., Shaikhutdinova,R.Z., Ivanov,S.A., Kislichkina,A.A., Kadnikova,L.A., Bogun,A.G., Dentovskaya,S.V. (2018) Full structure and insight into the gene cluster of the O-specific polysaccharide of Yersinia intermedia H9-36/83 (O:17). Carbohydr. Res., 460, 51-56.
762. Naumenko,O.I., Xiong,Y., Zheng,H., Senchenkova,S.N., Wang,H., Shashkov,A.S., Li,Q., Wang,J., Knirel,Y.A. (2018) Studies on the O-polysaccharide of Escherichia albertii O2 characterized by non-stoichiometric O-acetylation and non-stoichiometric side-chain L-fucosylation. Carbohydr. Res., 461, 80-84.
763. Naumenko,O.I., Guo,X., Senchenkova,S.N., Geng,P., Perepelov,A.V., Shashkov,A.S., Liu,B., Knirel,Y.A. (2018) Structure and gene cluster of the O-antigen of Escherichia coli O54 Carbohydr. Res., 462, 34-38.
764. Yang,B., Senchenkova,S.N., Naumenko,O.I., Shashkov,A.S., Liu,B., Perepelov,A.V., Knirel,Y.A. (2018) Structural and genetic relatedness of the O antigens of Escherichia coli O50 and O2 Carbohydr. Res., 464, 8-11.
765. Naumenko,O.I., Song,J., Senchenkova,S.N., Jiang,X., Perepelov,A.V., Shashkov,A.S., Knirel,Y.A. (2018) Structural studies on the O polysaccharide of Escherichia coli O57 Carbohydr. Res., 465. P. 1-3.
766. Zdorovenko,E.L., Shashkov,A.S., Kadykova,A.A., Kiseleva,E.P., Savich,V.V., Novik,G.I., Knirel,Y.A. (2018) Structures of O-specific polysaccharides of Pseudomonas psychrotolerans BIM B-1158. Carbohydr. Res., 465, 35-39.
767. Kiseleva,E.P., Mikhailopulo,K.I., Zdorovenko,E.L., Knirel,Y.A., Novik,G.I. (2018) Linear α-(1 → 6)-D-glucan from Bifidobacterium bifidum BIM В-733D is low molecular mass biopolymer with unique immunochemical properties. Carbohydr. Res., 466, 39-50.
768. Zdorovenko,E.L., Kadykova,A.A., Shashkov,A.S., Varbanets,L.D., Bulyhina,T.V., Knirel,Y.A. (2018) Lipopolysaccharides of Pantoea agglomerans 7604 and 8674 with structurally related O-polysaccharide chains: Chemical identification and biological properties. Carbohydr. Polym., 181, 386-393.
769. Korneev,K.V., Kondakova,A.N., Sviriaeva,E.N., Mitkin,N.A., Palmigiano,A., Kruglov,A.A., Telegin,G.B., Drutskaya,M.S., Sturiale,L., Garozzo,D., Nedospasov,S.A., Knirel,Y.A., Kuprash,D.V. (2018) Hypoacylated LPS from foodborne pathogen Campylobacter jejuni induces moderate TLR4-mediated inflammatory response in murine macrophages. Front. Cell. Infect. Microbiol., 8, Article 58.
770. Kasimova,A.A., Kenyon,J.J., Arbatsky,N.P., Shashkov,A.S., Popova,A.V., Knirel,Y.A., Hall,R.M. (2018) Acinetobacter baumannii K20 and K21 capsular polysaccharide structures establish roles for UDP-glucose dehydrogenase Ugd2, pyruvyltransferase Ptr2 and two glycosyltransferases. Glycobiology, 28, 876-884.
771. Khasbiullina,N.R., Shilova,N.V., Navakousky,M.E., Nokel,A.Y., Knirel,Y.A., Blixt,O., Bovin,N.V. (2018) Repertoire of Abs primed by bacteria in gnotobiotic mice. Innate Immun., 24, 180-187.
772. Arbatsky,N.P., Shneider,M.M., Dmitrenok,A.S., Popova,A.V., Shagin,D.A., Shelenkov,A.A., Mikhailova,Y.V., Edelstein,M.V., Knire,Y.A. (2018) Structure and gene cluster of the K125 capsular polysaccharide from Acinetobacter baumannii MAR13-1452. Int. J. Biol. Macromol., 117, 1195-1199.
773. Zabłotni,A., Arbatsky,N.P., Drzewiecka,D., Shashkov,A.S., Knirel,Y.A. (2018) Chemical characterization and serological properties of a unique O-polysaccharide of the Proteus mirabilis Sm 99 clinical strain – Identification of a new, O81, serotype. Int. J. Biol. Macromol., 118, 1131-1135.
774. Zdorovenko,E.L., Besarab,N.V., Shashkov,A.S., Novik,G.I., Shirokov,A.A., Burov,A.M., Knirel,Y.A. (2018) Investigation of O-polysaccharides from bacterial strains of Pseudomonas genus as potential receptors of bacteriophage BIM BV-45. Int. J. Biol. Macromol., 118, 1065-1072.
775. Zabłotni,A., Matusiak,D., Arbatsky,N.P., Moryl,M., Maciejewska,A., Kondakova,A.N., Shashkov,A.S., Ługowski,C., Knirel,Y.A., Różalski,A. (2018) Changes in the lipopolysaccharide of Proteus mirabilis 9B-m (O11a) clinical strain in response to planktonic or biofilm type of growth. Med. Microbiol. Immunol., 207, 129-139.
776. Kenyon,J.J., Kasimova,.A., Shashkov,A.S., Hall,R.M., Knirel,Y.A. (2018) Acinetobacter baumannii isolate BAL_212 from Vietnam produces the K57 capsular polysaccharide containing a rarely occurring amino sugar N-acetylviosamine. Microbology, 164, 217-220.
777. Shashkov,A.S., Kenyon,J.J., Arbatsky,N.P., Shneider,M.M., Popova,A.V., Knirel,Y.A., Hall,R.M. (2018) Genetics of biosynthesis and structure of the K53 capsular polysaccharide of Acinetobacter baumannii D23 made up of a disaccharide K unit. Microbology, 164, 1289-1292.
778. Zdorovanko,E.L., Wang,Y, Shashkov,A.S., Chen,T., Ovchinnikova,O.G., Liu,B., Golomidova,A.K., Babenko,V.V., Letarov,A.V., Knirel,Y.A. (2018) O-Antigens of Escherichia coli strains O81 and HS3-104 are structurally and genetically related, except O-antigen glucosylation in E. coli HS3-104. Biochemistry (Moscow), 83, 703-711.
779. Kasimova,A.A., Kenyon,J.J., Arbatsky,N.P., Shashkov,A.S., Popova,A.V., Knirel,Y.A., Hall,R.M. (2018) Structure of the K82 capsular polysaccharide from Acinetobacter baumannii LUH5534 containing a D-galactose 4,6-pyruvic acid acetal. Biochemistry (Moscow), 83, 1061-1066.
780. Shashkov,A.S., Senchenkova,S.N., Naumenko,O.I., Kalinchuk,N.A., Perepelov,A.V., Knirel,Y.A. (2018) Escherichia coli O106, a new member of a group of enteric bacteria sharing an O-polysaccharide backbone structure. Izv. AN. Ser. Khim., 1538-1541 [In Russian; English translation: Russ. Chem. Bull. Int. Ed. Eng., 67, 1538-1541].
781. Shashkov,A.S., Perepelov,A.V., Senchenkova,S.N., Kalinchuk,N.A., Knirel,Y.A. (2018) Structure of О-polysaccharide of Escherichia coli O95: a disaccharide repeating unit containing D-fucose and D-threo-pent-2-ulose (xylulose). Izv. AN. Ser. Khim., 1931-1933 [In Russian; English translation: Russ. Chem. Bull. Int. Ed. Eng., 67, 1931-1933].
MISCELLANEOUS PUBLICATIONS
1. Gapeeva,M.V., Stepanyants,A.U., Shusherina,N.P.,
Knirel,Y.A., Levina,R.Y. (1971) Diene synthesis with 2-pyrones. 9. Monoadducts
of diene synthesis of 2-pyrones with N-phenylmaleinimide. Zh. Org. Khim., 7,
2426-2429 [In Russian].
2. Knirel,Y.A. (1988) Lipopolysaccharides. In Chemical
Encyclopedia, vol. 2, pp. 602-603. Moscow: Sovetskaya Entsyclopediya [In
Russian].
3. Bertok,L., Kontrohr,T., Knirel,Y. (1992) Update on
endotoxin research in the former Soviet Union/USSR. Endotoxin Newsletter, 3,
4-5.
4. Knirel,Y.A. (1998) Structure elucidation of bacterial
polysaccharide antigens using NMR spectroscopy and chemical methods. RFBR
Infromational Bulletin, 6, 337 [In Russian].
5. Jansson,P.E., Knirel,Y.A., Defaye,J. (2003)
Carbohydrate Research. Thematic issue Bacterial antigens and vaccines:
Foreword. Carbohydr. Res., 338, 2429-2430.
6. Knirel,Y.A. (2003) Russian-German Workshop on
lipopolysaccharides of bacterial pathogens of humans. Vestnik RFBR, 1, 74-79
[In Russian].
7. Knirel,Y.A. (2006) N.K. Kochetkov. Essays.
Scientific lectures and reviews: Selected works (Knirel,Y.A.,
ed.): Editorial, pp. 6-7. Moscow: Nauka [In Russian].
8. Knirel,Y.A., Backinowsky,L.V. (2006) Academician
Nikolay Konstantinovich Kochetkov: 1915-2005. Glycoconj. J., 23, 269-271.
9. Backinowsky,L., Knirel,Y., Nikolaev,A. (2007) Nikolay
Konstantinovich Kochetkov 1915-2005. Carbohydr. Res., 342, 293-295.
10. Knirel,Y., Kochetkova,M. (2008) Nikolay
Konstantinovich Kochetkov 1915-2005. Adv. Carbohydr. Chem. Biochem., 61, 2-28.
11. Parrilli,M., Holst,O., Molinaro,A., Knirel,Y.
(2008) Chemical structure of lipopolysaccharide endotoxins.
http://www.scitopics.com/Chemical_structure_of_lipopolysaccharide_endotoxins.html
12. Knirel,Y.A., Backinowsky,L.V., Usov,A.I. (2009)
Laboratory of chemistry of carbohydrates and nucleotides ICNC AS USSR -
Laboratory of carbohydrate chemistry ZIOC RAS. 50 years: Collected book of
memoirs (Knirel,Y.A., ed.): Editorial, pp. 7-9.
Moscow: N.D. Zelinsky Instutute of Organic Chemistry RAS [In Russian].
13. Knirel,Y.A. (2009) Four decades in the Laboratory.
In Laboratory of chemistry of carbohydrates and nucleotides ICNC AS USSR -
Laboratory of carbohydrate chemistry ZIOC RAS. 50 years: Collected book of
memoirs (Knirel,Y.A., ed.) pp. 203-211. Moscow: N.D.
Zelinsky Instutute of Organic Chemistry RAS [In Russian].
14. Yanchilina,F. (2009) Y.A. Knirel. Mutants take up
the cudgels for us: Interview. Poisk, 45-46 (13 November 2009), 15 [In
Russian].
15. Knirel,Y.A. (2011) Biochemistry (Moscow). Thematic
issue Microbial carbohydrates: Microbial carbohydrates (foreword).
Biokhimiya, 76, 893-894 [In Russian; English translation: Biochemistry
(Moscow), 727-728].
16. Knirel,Y.A., Valvano,M.A. (2011) Bacterial
lipopolysaccharides: Structure, chemical synthesis, biogenesis and interaction
with host cells (Knirel Y.A., Valvano M.A., eds.): Preface, pp. v-vi. Wien:
SpringerWienNewYork.
17. Knirel,Y.A (2015) Nikolay Konstantinovich
Kochetkov (1915-2005) (on the occasion of 100-year annoversary) / Knirel Y.A. // Russ. Chem. Bull., 64, N 5.
18. Bovin,N.V., Knirel,Y.A. (2015) Biochemistry (Moscow). Thematic issue Fundamental glycobiology
(foreword). Biokhimiya, 80, 957-958 [In Russian; English translation: Biochemistry (Moscow), 80, N 7].
CONFERENCE PLENARY, KEYNOTE, INVITED LECTURES AND
ORAL PRESENTATIONS
1. Structure of the O-antigenic polysaccharides of dysentery bacilli. All-Union Scientific Conference Results and Prospects of
Studies of Microbial Polysaccharides, Leningrad, USSR, 12-13 October 1978
[in Russian].
2. Bacterial hexosaminoglycans with unusual aminosugars. I Soviet-Swedish
Symposium Chemistry and Biochemistry of Carbohydrates, Moscow, USSR,
13-18 April 1983.
3. Hexosaminoglycans with unusual aminosugars. Comecon Coordination Meeting and
Symposium Chemistry of Carbohydrates and Their Derivatives. Moscow,
USSR, 14-17 November 1983.
4. O-specific polysaccharides of Pseudomonas aeruginosa. II All-Union
Scientific Conference Results and Prospects of Scientific Studies of
Microbial Polysaccharides. Leningrad, USSR, 2-3 July 1984.
5. Structural investigation of bacterial polysaccharides containing 5,7-diamino-3,5,7,9-tetradeoxynonulosonic acid derivatives.
II Soviet-Swedish Carbohydrate Symposium, Stockholm, Sweden, 3-5 June 1985.
6. Carbohydrate-containing polymers of the cell wall and membrane of
Gram-negative bacteria. All-Union Workshop-School Chemistry and Biochemistry
of Cell-Surface Carbohydrates of Microorganisms, Saratov, USSR, 28
September-2 October 1985 [in Russian].
7. Structure of the O-specific polysaccharides of Pseudomonas aeruginosa. V
All-Union Biochemical Congress, Kiev, USSR, 27-31 January 1986 [in Russian].
8. Structural elucidation of the Proteus O-specific polysaccharides containing
non-sugar acids. III Soviet-Swedish Carbohydrate Symposium, Kiev, USSR, 15-18
February 1988.
9. Structural studies of Klebsiella K4 capsular polysaccharide containing
3-deoxy-D-glycero-D-galacto-nonulosonic acid. III School on Chemistry of
Carbohydrates, Jaworze near Bielsko-Biala, Poland, 5-7 October 1988.
10. Microbial carbohydrates structure determination. 4th
Leipzig Symposium on Biotechnology Cell Envelope - Mediator and Sign of
Cellular Productivities, Leipzig, G.D.R., 12-15 December 1988.
11. The chemical basis for classification of Pseudomonas aeruginosa by
O-antigens. XIV Mendeleev Congress on General and Applied Chemistry, Tashkent,
USSR, 11-16 September 1989 [in Russian].
12. Selective cleavage of glycosidic linkages in structural analysis of
bacterial polysaccharides. IV Soviet-Swedish Carbohydrate Symposium, Lund,
Sweden, 7-11 May 1990.
13. Monosaccharides of new classes - components of antigenic polysaccharides.
Scientific Session on Carbohydrate Chemistry Devoted to the 75th Anniversary of
Academician N.K. Kochetkov, Moscow, Russia, 18 May
1990 [in Russian].
14. Modern chemical methods of structural studies of bacterial polysaccharides.
II All-Union Workshop Chemistry and Biochemistry of Cell-Surface
Carbohydrates of Microorganisms, Saratov, USSR, 9-13 September 1991 [in
Russian].
15. Structural study of O-specific polysaccharides of Proteus. XVI
International Carbohydrate Symposium, Paris, France, 5-10 July 1992.
16. Lipopolysaccharides of Gram-negative bacteria: on the way to the full
structure. Conference Biosynthesis and Degradation of Microbial Polymers.
Basic and Applied Aspects, Pushchino, Russia, 13-17 June 1995 [in Russian].
17. Vibrio cholerae O139 lipopolysaccharide has the same carbohydrate
core-lipid A backbone as V. cholerae O1 but different,
short O-sidechain. XVIII International Carbohydrate Symposium, Milan, Italy,
21-26 July 1996.
18. Structure of a new N-acetylisomuramic acid-containing O-specific
polysaccharide of Proteus penneri strains 19 and 35. XVIII International
Carbohydrate Symposium, Milan, Italy, 21-26 July 1996.
19. Mimicry of blood group antigens by human pathogenic bacteria. X School on
Chemistry and Biology of Carbohydrates, Ustron near Wisla, Poland, 30 May-2
June 1999.
20. Structural chemistry of bacterial polysaccharides. Scientific Session on
Carbohydrate Chemistry Devoted to the 85th Anniversary of Academician N.K.
Kochetkov, Moscow, Russia, 18 May 2000 [in Russian].
21. Mimicry of Lewis blood group antigens by the lipopolysaccharide of
Helicobacter pylori. International Symposium Modern Problems of Microbial
Biochemistry and Biotechnology, Pushchino, Russia, 25-30 June 2000.
22. Mimicry of Lewis blood group antigens by the lipopolysaccharide of
Helicobacter pylori. 1st German-Polish-Russian Meeting
on Bacterial Carbohydrates, Borstel, Germany, 4-5 September 2000.
23. 5,7-Diamino-3,5,7,9-tetradeoxynon-2-ulosonic
acids: identification in bacterial polysaccharide antigens, synthesis and NMR
spectroscopy. XI European Carbohydrate Symposium (Eurocarb XI), Lisbon,
Portugal, 2-7 September 2001.
24. Chemical structure and biological significance of the lipopolysaccharide of
the Legionnaire's disease bacterium Legionella pneumophila. Days of Polish
Science in Russia, 17-18 October 2001. Symposium Chemical Studies of
Biologically Important Compounds, Moscow, Russia, 17
October 2001.
25. Lipopolysaccharides of the Legionnaires' disease bacterium, Legionella
pneumophila. International Scientific Symposium The Institute of Immunology
on the Threshold of the 21st Century, Wroclaw, Poland, 15-16 December 2002.
26. Structural variability of the lipopolysaccharide of Yersinia pestis.
Carbohydrate Workshop 2003, Gustrov-Rostock, Germany, 27-30 March 2003.
27. Temperature-dependent variations in the lipopolysaccharide structure of
Yersinia pestis. XII European Carbohydrate Symposium (Eurocarb XII), Grenoble,
France, 6-11 July 2003.
28. Structure and biological role of bacterial glycoconjugates. Scientific
Conference Organic Chemistry and Catalysis: Past, Present, and Future
Devoted to the 70th Anniversary of the N.D. Zelinsky Institute of Organic
Chemistry, Moscow, Russia, 25-27 February 2004 [in Russian].
29. Distinguished structural features of the Pseudomonas aeruginosa
lipopolysaccharide. Carbohydrate Workshop 2004, Borstel, Germany, 17-20 March
2004.
30. Conserved and variable structural features of the lipopolysaccharide of
Pseudomonas aeruginosa. XXII International Carbohydrate Symposium, Glasgow, UK,
23-27 July 2004.
31. Structural variability of the lipopolysaccharides of Gram-negative
bacteria. III All-Russian School-Conference Chemistry and Biochemistry of
Carbohydrates, Saratov, Russia, 9-11 September 2004 [in Russian].
32. Structure and biological role of the lipopolysaccharide of Yersinia pestis,
the cause of plague. Days of Russian Science in Poland, 9-14 October 2004.
Symposium Progress in Studies of Natural and Biologically Active Compounds,
Warsaw, Poland, 12 October 2004.
33. High structural diversity of Proteus lipopolysaccharides. Scientific
Session in Memory of Professor Krystyna Kotelko, Lodz, Poland, 26 October 2004.
34. New structures of the O-antigens of Escherichia coli O29, O130 and O150
related to Shigella dysenteriae. XIII European Carbohydrate Symposium (Eurocarb
XIII), Bratislava, Slovakia, 21-26 August 2005.
35. Cold temperature-induced modifications to the lipopolysaccharide structure
and biological properties of Yersinia pestis. XVIII International Symposium on
Glycoconjugates (Glyco XVIII), Florence, Italy, 4-9 September 2005.
36. Studies of structure and biological properties of the lipopolysaccharide of
Yersinia pestis. Fifth Annual Review of the Cooperative Biological Research
Program, Saint Petersburg, Russia, 10-13 October 2005.
37. Isolation and characterization of bacterial carbohydrates for construction
of pathogen glycan array. Consortium for Functional Glycomics Particpating
Investigators Meeting Frontiers in Glycomics, Boston, Massachusetts, USA, 13 November
2005.
38. Yersinia pestis lipopolysaccharide: genetic control and biological
functions. Russian-Chinese Workshop Bacterial Carbohydrate Antigens: From
Structure and Genetics to Diagnostica and Vaccines, Moscow, Russia, 22-23
August 2006.
39. Structures of the lipopolysaccharides of bacteria Providencia and a
potential of Providencia O-polysaccharides as vaccine components.
Russian-Chinese Workshop Bacterial Carbohydrate Antigens: From Structure and
Genetics to Diagnostica and Vaccines, Moscow, Russia, 22-23 August 2006.
40. Phase variations of cell-surface carbohydrates as a mechanism of adaptation
of bacteria to variable environmental factors. X International
School-Conference Actual Problems of Chemistry and Biology, Vladivostok,
Russia, 12-20 September 2006 [in Russian].
41. Relationship of structural variations in the lipopolysaccharide of Yersinia
pestis to resistance to antimicrobial peptides and complement-mediated killing.
9th International Symposium on Yersinia, Lexington, Kentucky,
USA, 10-14 October 2006.
42. Structures of the O-antigens of Shigella dysenteriae and Shigella boydii
revisited. XIV European Carbohydrate Symposium (Eurocarb XIV), Lübeck, Germany,
2-7 September 2007.
43. Molecular basis of participation of lipopolysaccharides in pathogenesis of
Gram-negative infections. IV Congress of the Russian Society of Biochemistry
and Molecular Biology, Novosibirsk, Russia, 11-16 May 2008 [in Russian].
44. Relationships between O-antigens of enteric bacteria. 3rd
Baltic Meeting on Microbial Carbohydrates, Sigtuna, Sweden, 1-4 August 2008.
45. Studies of Yersinia pseudotuberculosis lipopolysaccharide structure using
two-dimensional NMR spectroscopy and high resolution
mass spectrometry. XV European Carbohydrate Symposium (Eurocarb XV), Wien,
Austria,19-24 July 2009.
46. 5,7-Diamino-3,5,7,9-tetradeoxynon-2-ulosonic acids
– immunodominant components of antigenic polysaccharides of medical bacteria:
identification, synthesis, biosynthesis. All-Russian Conference on Organic
Chemistry Devoted to the 75th Anniversary of the N.D. Zelinsky Institute of
Organic Chemistry, Moscow, Russia, 25-30 October 2009
[in Russian].
47. Bacterial lipopolysaccharides and their role in infectious diseases. XXII
Winter Youth Scientific School The Outlook
over Physico-Chemical Biology and Biotechnology, Moscow, Russia, 8-11
February 2010 [in Russian].
48. Molecular basis of the biological activity of the lipopolysaccharide as a
pathogenicity factor of Gram-negative bactera, Scientific Workshop Synthesis,
Structure and Properties of Biologically Active Substances, Gurzuf, Crimea,
Ukraine, 24-26 May 2010 [in Russian].
49. New structures of Salmonella enterica O-antigens and their relationships
with O-antigens of Escherichia coli. XXV International Carbohydrate Symposium,
Tokyo, Japan, 1-6 August 2010.
50. Structure, genetics, and evolution of variation of the O-antigens of
closely related enterobacteria Salmonella enterica and Escherichia coli. FASEB
Summer Research Conference Microbial Polysaccharides of Medical,
Agricultural and Industrial Importance, Carefree, Arizona, USA, 5-10 June
2011.
51. Structure and biosynthesis of bacterial lipopolysaccharides. Russian-Indian
Symposium on Glycosciences, Moscow, Russia, 13-16 June 2011.
52. Structures and genetics of the O-antigens of Cronobacter sakazakii. XVI
European Carbohydrate Symposium (Eurocarb XVI), Sorrento (Naples), Italy, 3-8
July 2011.
53. Structural and genetic studies of the O-antigens of enteric bacteria. IV
All-Russian School-Conference Chemistry and Biochemistry of Carbohydrates,
Saratov, Russia, 14-16 September 2011 [in Russian].
54. Structural and genetic studies of the O-antigens of enteric bacteria. I
All-Russian Conference Fundamental Glycobiology, Kazan, Russia, 20-24
June 2012 [in Russian].
55. O-Antigen phosphorylation in Shigella flexneri: a clue to the enigma of the
monoclonal antibody MASF IV-I specifity. XXVI International Carbohydrate
Symposium, Madrid, Spain, 22-27 July 2012.
56. New O-antigen variants of Shigella flexneri; one plasmid-borne
phosphoethanolamine transferase gene is responsible for phosphorylation of
different rhamnose residues. 5th Baltic Meeting on
Microbial Carbohydrates, Suzdal, Russia, 2-6 September 2012.
57. New variants of Shigella flexneri with O-antigens decorated with
phosphoethanolamine. 6th Annual Meeting of the Tuanshan Hill Anti-Emerging
Infectious Diseases Forum, Beijing, P. R. China, 9-13 January 2013.
58. Extension of the O-antigen-based serotyping scheme of Shigella flexneri.
XVII European Carbohydrate Symposium (Eurocarb XVII), Tel-Aviv, Israel, 7-11
July 2013.
59. Degradation of capsular polysaccharides of Acinetobacter baumannii by specific phage tail-spike depolymerases. XXVII International Carbohydrate Symposium, Bangalore, India, 12-17 January 2014.
60. Bacterial polysaccharides. XXVI Winter Youth Scientific School The Outlook over Physico-Chemical Biology and Biotechnology, Moscow, Russia, 10-14 February 2014 [in Russian].
61. Cleavage of capsular polysaccharides of Acinetobacter baumannii by specific tail-spike depolymerases of lytic bacteriophages. II All-Russian Conference Fundamental Glycobiology, Saratov, Russia, 7-11 July 2014 [in Russian].
62. O-Acetylation as a primary way of the O-antigen variation in Shigella flexneri and the underlying genetic mechanisms. 6th Baltic Meeting on Microbial Carbohydrates, Gdansk, Poland, 7-10 September 2014.
63. Genetic mechanisms of the O-antigen structure diversification of Escherichia coli and Shigella spp. XVIII International Carbohydrate Symposium, New Orleans, Louisiana, USA, 17–21 July 2016.
64. Structural and genetic studies of the O-antigens of Escherichia coli and Shigella spp. III All-Russian Conference Fundamental
Glycobiology, Vladivostok, Russia, 7–12 September 2016.
65. Molecular evolutionary relationships between O-antigens of enteric bacteria. 7th Baltic Meeting on Microbial Carbohydrates, Güstrow-Rostock, Germany, 25-29 September 2016.
66. Structural and genetic studies of the O-antigens of Escherichia coli and Shigella flexneri. Scientific conference of grantholders of the Russian Science Foundation Fundamental scientific investigations of the XXI centure, Moscow, Russia, 20-24 November 2016.
67. Molecular evolutionary relationships between the O-antigens of enteric bacteria. V Congress of Biochemists of Russia, Sochi-Dagomys, 4-9 October 2016.
68. Сapsular polysaccharides of the nosocomial pathogen Acinetobacter baumannii: Structure, genetics, and cleavage by bacteriophages. Gordon Research Conference Carbohydrates, West Dover, Vermont, USA, 25-30 June 2017.
69. Сapsular polysaccharides of Acinetobacter baumannii: Structure, genetics of biosynthesis, cleavage by tail-spike proteins of A. baumannii-specific bacteriophages. 19th European Carbohydrate Symposium, Barcelona, Spain, 2-6 July 2017.
70. Interaction of tail-spike receptor proteins of specific bacteriophages with K and O polysaccharides of bacterial pathogens. 15th Finnish Microbial Pathogenesis Days, Helsinki, Finland, 21-23 August 2017.
SELECTED CONFERENCE ABSTRACTS
1. The relationship between the degree of the rhamnan backbone substitution and
the biological activity of Pseudomonas syringae lipopolysaccharides. Zdorovenko,G.M., Vodyanik,M.A., Yakovleva,L.M., Knirel,Y.A. XVIth
Intern. Symp. on Glycoconjugates, The Hague, The
Netherlands, 19-24 August 2001, C5.2.
2. Structures of the O-polysaccharide chains of the lipopolysaccharides of some
phytopathogenic bacteria. Senchenkova,S.N., Knirel,Y.A., Shashkov,A.S.,
Huang,X., Furuya,N., Muller,P., Ahmed,M., Laux,P., Rudolph,K. XIth Eur.
Carbohydr. Symp., Lisbon, Portugal, 2-7 September
2001. P. 333.
3. Comparative structural analysis of Helicobacter pylori lipopolysaccharides
involved in binding of collectin surfactant protein D. Moran,A.P., Ferris,J.A.,
Perepelov,A.V., Senchenkova,S.N., Worku,M., Kharmi,W., Thursz,M.R.,
Jansson,P.-E., Knirel,Y.A. Gut, 49 (Suppl.2), A14 (2001).
4. Comparative characterisation of the lipopolysaccharides of gastric and
intestinal Helicobacter spp. Ferris,J.A.B., Perepelov,A.V., Senchenkova,S.N.,
Kocharova,N.A., Knirel,Y.A., Jansson,P.-E., Wadstrom,T., Andersen,L.P.,
Moran,A.P. Gut, 49 (Suppl.2), A51-A52 (2001).
5. Preliminary analysis of the lipopolysaccharides (LPSs) of human and chicken
isolates of Helicobacter pullorum. Moran,A.P.,
Perepelov,A.V., Knirel,Y.A., Hynes,O.S., Wadstrom,T., Jansson,P.E. XVIth
Intern. Workshop 'Gastrointestinal Pathology and Helicobacter', Stockholm,
Sweden, 3-6 September 2003. P 416.
6. Characterization of LPS from the emerging human gastric pathogen
Helicobacter bizzozeronii. Moran,A.P., Ferris,J.A.,
Kocharova,N.A., Knirel,Y.A., Widmalm,G., Andersen,L.P., Jansson,P.-E. 8th Conf. Intern. Endotoxin Soc., Kyoto, Japan, 15-18 November
2004. J. Endotoxin Res., 10, 70 (2004).
7. Lewis expression on LPS of Japanese Helicobacter pylori-associated cancer
strains and importance of serological test format for detection. Moran,A.P., Perepelov,A.V., Knirel,Y.A., Amano,K.-I., McGovern,J.J.,
Jansson,P.-E. 8th Conf. Intern. Endotoxin Soc., Kyoto,
Japan, 15-18 November 2004. J. Endotoxin Res., 10, 71 (2004).
8. Adaptation of Lewis antigen expression in LPS of Helicobacter pylori from
experimentally infected rhesus monkeys. Moran,A.P., Ferris,J.A.,
Perepelov,A.V., Blaser,M.J., Kocharova,N.A., Knirel,Y.A., Wirth,H.-P.,
Jansson,P.-E. 8th Conf. Intern. Endotoxin Soc., Kyoto,
Japan, 15-18 November 2004. J. Endotoxin Res., 10, 73-74 (2004).
9. New database of bacterial carbohydrate structures. Toukach,F.V.,
Knirel,Y.A. 18th Intern. Symp. Glycoconjugates, Florence, 4-9 September 2005.
Glycoconj. J., 22, 216–217 (2005).
10. The full lipopolysaccharide core structure in Yersinia pestis is essential
for manifestation of plasminogen activator tricks. Dentovskaya,S.V.,
Platonov,M.E., Bakhteeva,I.V., Bystrova,O.V., Kocharova,N.A., Senchenkova,S.N.,
Lindner,B., Knirel,Y.A., Anisimov A.P. 9th Intern. Symp. on
Yersinia, Lexington, Kentucky, USA, 10-14 October 2006. P. 63.
11. Molecular basis of participation of lipopolysaccharides in pathogenesis of Gram-negative infections. IV Congress of the Russian Society of Biochemistry and Molecular Biology, Novosibirsk, Russia, 11-16 May 2008 [in Russian].
12. Development of a bacterial pathogen surface antigen polysaccharide
micro-array platform. Berger,O., McBride,R., Andersson-Sand,H., Busch,J.,
Bohorov,O., Blixt,O., Knirel,Y., Razi,N., Paulson,J. FASEB Summer Res. Conf.
'Microbial Polysaccharides of Medical, Agricultural, and Industrial
Importance'. Carefree, Arizona, USA, 15-20 June 2008.
13. Chemically modified lipopolysaccharides of Shigella as potential protective preparations. L'vov,V.L., Shekht,M.A., Markina,A.A., Ledov,V.A., Golovina,M.E., Ankudinov,I.V., Aparin,P.G., Kondakova,A.N., Perepelov,A.V., Knirel,Y.A. Sci. Conf. 'Biologically Active Substances: Fundamental and Applied Problems'. Novy
Svet, Crimea, Ukraine, 25-30 May 2009. P. 120.
14. Extension of the O-antigen-based serotyping scheme of Shigella flexneri. XVII European Carbohydrate Symposium (Eurocarb XVII), Tel-Aviv, Israel, 7-11 July 2013.
15. Degradation of capsular polysaccharides of Acinetobacter baumannii by specific phage tail-spike depolymerases. XXVII International Carbohydrate Symposium, Bangalore, India, 12-17 January 2014.
16. Genetic mechanisms of the O-antigen structure diversification of Escherichia coli and Shigella spp. XXVIII International Carbohydrate Symposium, New Orleans, Louisiana, USA, 17–21 July 2016.
PATENTS
1. Strain of Arthrobacter globiformis bacteria producing an extracellular
polysaccharide / Grigor'eva,N.A., Shubina,L.N., Musiyachenko,A.G., Knirel',Y.A., Vinogradov,E.V., Borina,L.E., Khokhlenko,A.F.
// Author certificate No. 1427835 USSR. Application No. 4139842; applied 28.10.1986; published 1988; Bulletin No. 36.
2. Strain of Bifidobacterium bifidum bifidobacteria used for production of a probiotic preparation or an acidic milk product / Sidorenko,A.V., Novik,G.I., Knirel,Y.A. // Patent No. 15124 Republic Belarus'. Application No. a 20091244; applied 18.08.2009; registered 26.07.2011.
3. Method of isolation of polysaccharides from biomass of bifidobacteria / Novik,G.I., Zdorovenko E.L., Sidarenko A.V., Kiseleva E.P., Knirel,Y.A. // Patent No. 16185 Republic Belarus'. Application No. a20091509; applied 23.10.2009; registered 27.04.2012.
4. Lipopolysaccharide of bacteria Pseudomonas and method of isolation thereof / Novik,G.I., Rakhuba,D.V., Valueva,O.A., Zdorovenko,E.L., Kiseleva,E.P., Knirel,Y.A. // Patent No. 19450 Republic Belarus'. Application No. a20120876, applied 04.06.2012; registered 28.05.2015.
5. Teichoic acid of Bifidobacterium longum and method of isolation of teichoic acid from biomass of bifidobacteria / Izhik,A.V., Novik,G.I., Valueva,O.A., Knirel,Y.A. // Patent No. 19625 Republic Belarus'. Application No. a20121105, applied 23.07.2012; registered 07.08.2015.
DISSERTATIONS
Selective cleavage of hexosaminoglycans. PhD thesis. Moscow, 1975.
Structure of the O-antigenic polysaccharides of Pseudomonas aeruginosa. ScD thesis. Moscow, 1991.
Return to Main Page